RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 PTPRCP08575 1304 aa17.74■□□□□ 0.43
TNFAIP2-207ENST00000560562 TAF5LO75529 589 aa17.73■□□□□ 0.43
TNFAIP2-207ENST00000560562 IFIT5Q13325 482 aaKnown RBP17.73■□□□□ 0.43
TNFAIP2-207ENST00000560562 RBM26Q5T8P6 1007 aaKnown RBP17.73■□□□□ 0.43
TNFAIP2-207ENST00000560562 PODNQ7Z5L7 613 aa17.73■□□□□ 0.43
TNFAIP2-207ENST00000560562 ANKRD2Q9GZV1 360 aa17.72■□□□□ 0.43
TNFAIP2-207ENST00000560562 ABT1Q9ULW3 272 aaKnown RBP17.72■□□□□ 0.43
TNFAIP2-207ENST00000560562 USP17L3A6NCW0 530 aa17.72■□□□□ 0.43
TNFAIP2-207ENST00000560562 USP17L4A6NCW7 530 aa17.72■□□□□ 0.43
TNFAIP2-207ENST00000560562 ZNF280AP59817 542 aaPredicted RBP17.72■□□□□ 0.43
TNFAIP2-207ENST00000560562 KIF4BQ2VIQ3 1234 aa17.72■□□□□ 0.43
TNFAIP2-207ENST00000560562 ALDH1L2Q3SY69 923 aa17.72■□□□□ 0.43
TNFAIP2-207ENST00000560562 DACT2Q5SW24 774 aa17.72■□□□□ 0.43
TNFAIP2-207ENST00000560562 USP17L1Q7RTZ2 530 aa17.72■□□□□ 0.43
TNFAIP2-207ENST00000560562 ANKRD44Q8N8A2 993 aa17.72■□□□□ 0.43
TNFAIP2-207ENST00000560562 AGBL3Q8NEM8 1001 aa17.72■□□□□ 0.43
TNFAIP2-207ENST00000560562 CELF2O95319 508 aaKnown RBP17.71■□□□□ 0.43
TNFAIP2-207ENST00000560562 DEFB115Q30KQ5 88 aa17.71■□□□□ 0.43
TNFAIP2-207ENST00000560562 USP48Q86UV5 1035 aa17.71■□□□□ 0.43
TNFAIP2-207ENST00000560562 COA1Q9GZY4 146 aa17.71■□□□□ 0.43
TNFAIP2-207ENST00000560562 BICC1Q9H694 974 aaKnown RBP17.71■□□□□ 0.43
TNFAIP2-207ENST00000560562 SMC4Q9NTJ3 1288 aa17.71■□□□□ 0.43
TNFAIP2-207ENST00000560562 ECM29Q5VYK3 1845 aa17.7■□□□□ 0.42
TNFAIP2-207ENST00000560562 ADM5C9JUS6 153 aa17.7■□□□□ 0.42
TNFAIP2-207ENST00000560562 CCDC57Q2TAC2 916 aa17.7■□□□□ 0.42
TNFAIP2-207ENST00000560562 COL13A1Q5TAT6 717 aaPredicted RBP17.7■□□□□ 0.42
TNFAIP2-207ENST00000560562 CDC37L1Q7L3B6 337 aa17.7■□□□□ 0.42
TNFAIP2-207ENST00000560562 PUS3Q9BZE2 481 aaKnown RBP17.7■□□□□ 0.42
TNFAIP2-207ENST00000560562 USP44Q9H0E7 712 aa17.7■□□□□ 0.42
TNFAIP2-207ENST00000560562 TLL2Q9Y6L7 1015 aa17.7■□□□□ 0.42
TNFAIP2-207ENST00000560562 ARAP2Q8WZ64 1704 aa17.69■□□□□ 0.42
TNFAIP2-207ENST00000560562 RABL6Q3YEC7 729 aaPredicted RBP17.69■□□□□ 0.42
TNFAIP2-207ENST00000560562 GGA3Q9NZ52 723 aa17.69■□□□□ 0.42
TNFAIP2-207ENST00000560562 USP17L8P0C7I0 530 aa17.68■□□□□ 0.42
TNFAIP2-207ENST00000560562 CYP4F22Q6NT55 531 aa17.68■□□□□ 0.42
TNFAIP2-207ENST00000560562 LDHAL6AQ6ZMR3 332 aa17.68■□□□□ 0.42
TNFAIP2-207ENST00000560562 KRT26Q7Z3Y9 468 aa17.68■□□□□ 0.42
TNFAIP2-207ENST00000560562 SAPCD2Q86UD0 394 aa17.68■□□□□ 0.42
TNFAIP2-207ENST00000560562 ZNF408Q9H9D4 720 aa17.68■□□□□ 0.42
TNFAIP2-207ENST00000560562 WDR33Q9C0J8 1336 aaKnown RBP17.68■□□□□ 0.42
TNFAIP2-207ENST00000560562 KCNJ4P48050 445 aa17.67■□□□□ 0.42
TNFAIP2-207ENST00000560562 STRIP1Q5VSL9 837 aa17.67■□□□□ 0.42
TNFAIP2-207ENST00000560562 C15orf52Q6ZUT6 534 aaKnown RBP17.67■□□□□ 0.42
TNFAIP2-207ENST00000560562 FBXW7Q969H0 707 aa17.67■□□□□ 0.42
TNFAIP2-207ENST00000560562 CD209Q9NNX6 404 aa17.67■□□□□ 0.42
TNFAIP2-207ENST00000560562 MYOZ2Q9NPC6 264 aa17.67■□□□□ 0.42
TNFAIP2-207ENST00000560562 FOXN1O15353 648 aa17.66■□□□□ 0.42
TNFAIP2-207ENST00000560562 PLIN1O60240 522 aa17.66■□□□□ 0.42
TNFAIP2-207ENST00000560562 SCARF1Q14162 830 aa17.66■□□□□ 0.42
TNFAIP2-207ENST00000560562 TAF7LQ5H9L4 462 aa17.66■□□□□ 0.42
TNFAIP2-207ENST00000560562 CAPNS2Q96L46 248 aa17.66■□□□□ 0.42
TNFAIP2-207ENST00000560562 CNNM1Q9NRU3 951 aa17.66■□□□□ 0.42
TNFAIP2-207ENST00000560562 NOB1Q9ULX3 412 aaKnown RBP17.66■□□□□ 0.42
TNFAIP2-207ENST00000560562 SCAF8Q9UPN6 1271 aaKnown RBP17.66■□□□□ 0.42
TNFAIP2-207ENST00000560562 MYH13Q9UKX3 1938 aa17.65■□□□□ 0.42
TNFAIP2-207ENST00000560562 CT47B1P0C2W7 299 aaPredicted RBP17.65■□□□□ 0.42
TNFAIP2-207ENST00000560562 RARSP54136 660 aaKnown RBP17.65■□□□□ 0.42
TNFAIP2-207ENST00000560562 GTF2IP78347 998 aa17.65■□□□□ 0.42
TNFAIP2-207ENST00000560562 ANGEL2Q5VTE6 544 aaKnown RBP17.65■□□□□ 0.42
TNFAIP2-207ENST00000560562 TTLL5Q6EMB2 1281 aa17.65■□□□□ 0.42
TNFAIP2-207ENST00000560562 CERS5Q8N5B7 392 aa17.65■□□□□ 0.42
TNFAIP2-207ENST00000560562 KLHDC4Q8TBB5 520 aa17.65■□□□□ 0.42
TNFAIP2-207ENST00000560562 RIPOR2Q9Y4F9 1068 aa17.65■□□□□ 0.42
TNFAIP2-207ENST00000560562 BRPF1P55201 1214 aaPredicted RBP17.64■□□□□ 0.42
TNFAIP2-207ENST00000560562 NBPF9Q3BBW0 867 aa17.64■□□□□ 0.42
TNFAIP2-207ENST00000560562 LRRC24Q50LG9 513 aa17.64■□□□□ 0.42
TNFAIP2-207ENST00000560562 DCPSQ96C86 337 aaKnown RBP17.64■□□□□ 0.42
TNFAIP2-207ENST00000560562 WBP1LQ9NX94 342 aa17.64■□□□□ 0.42
TNFAIP2-207ENST00000560562 GRM1Q13255 1194 aa17.64■□□□□ 0.41
TNFAIP2-207ENST00000560562 IFFO2Q5TF58 517 aa17.64■□□□□ 0.41
TNFAIP2-207ENST00000560562 PAXIP1Q6ZW49 1069 aaPredicted RBP17.64■□□□□ 0.41
TNFAIP2-207ENST00000560562 JAG2Q9Y219 1238 aa17.64■□□□□ 0.41
TNFAIP2-207ENST00000560562 AOC2O75106 756 aa17.63■□□□□ 0.41
TNFAIP2-207ENST00000560562 IL1R1P14778 569 aa17.63■□□□□ 0.41
TNFAIP2-207ENST00000560562 KIAA0825Q8IV33 1275 aa17.63■□□□□ 0.41
TNFAIP2-207ENST00000560562 MYO3BQ8WXR4 1341 aa17.62■□□□□ 0.41
TNFAIP2-207ENST00000560562 WNT10BO00744 389 aa17.62■□□□□ 0.41
TNFAIP2-207ENST00000560562 SASH1O94885 1247 aa17.62■□□□□ 0.41
TNFAIP2-207ENST00000560562 RFX5P48382 616 aaPredicted RBP17.62■□□□□ 0.41
TNFAIP2-207ENST00000560562 VGLL2Q8N8G2 317 aa17.62■□□□□ 0.41
TNFAIP2-207ENST00000560562 CDCA5Q96FF9 252 aa17.62■□□□□ 0.41
TNFAIP2-207ENST00000560562 TNNQ9UQP3 1299 aa17.62■□□□□ 0.41
TNFAIP2-207ENST00000560562 PCDHAC2Q9Y5I4 1007 aa17.62■□□□□ 0.41
TNFAIP2-207ENST00000560562 PAPPA2Q9BXP8 1791 aa17.61■□□□□ 0.41
TNFAIP2-207ENST00000560562 GYG1P46976 350 aa17.61■□□□□ 0.41
TNFAIP2-207ENST00000560562 ZNF804AQ7Z570 1209 aa17.61■□□□□ 0.41
TNFAIP2-207ENST00000560562 SULF1Q8IWU6 871 aa17.61■□□□□ 0.41
TNFAIP2-207ENST00000560562 ZBED3Q96IU2 234 aaPredicted RBP17.61■□□□□ 0.41
TNFAIP2-207ENST00000560562 ZIC5Q96T25 663 aa17.61■□□□□ 0.41
TNFAIP2-207ENST00000560562 HUNKP57058 714 aa17.6■□□□□ 0.41
TNFAIP2-207ENST00000560562 UBE4AQ14139 1066 aa17.6■□□□□ 0.41
TNFAIP2-207ENST00000560562 HHIPL1Q96JK4 782 aa17.6■□□□□ 0.41
TNFAIP2-207ENST00000560562 GBA2Q9HCG7 927 aaPredicted RBP17.6■□□□□ 0.41
TNFAIP2-207ENST00000560562 AOX1Q06278 1338 aa17.6■□□□□ 0.41
TNFAIP2-207ENST00000560562 PITPNM2Q9BZ72 1349 aa17.6■□□□□ 0.41
TNFAIP2-207ENST00000560562 ECE1P42892 770 aa17.59■□□□□ 0.41
TNFAIP2-207ENST00000560562 PRAMEF18Q5VWM3 479 aa17.59■□□□□ 0.41
TNFAIP2-207ENST00000560562 FAM84BQ96KN1 310 aaPredicted RBP17.59■□□□□ 0.41
TNFAIP2-207ENST00000560562 API5Q9BZZ5 524 aaKnown RBP17.59■□□□□ 0.41
TNFAIP2-207ENST00000560562 MROH5Q6ZUA9 1318 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms