RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 SWI5Q1ZZU3 235 aa6.72□□□□□ -1.33
SPG11-222ENST00000560435 FAM26DQ5JW98 314 aa6.72□□□□□ -1.33
SPG11-222ENST00000560435 LCE1DQ5T752 114 aa6.72□□□□□ -1.33
SPG11-222ENST00000560435 TTC39BQ5VTQ0 682 aaPredicted RBP6.72□□□□□ -1.33
SPG11-222ENST00000560435 ANKRD34AQ69YU3 496 aa6.72□□□□□ -1.33
SPG11-222ENST00000560435 ADAMTSL4Q6UY14 1074 aa6.72□□□□□ -1.33
SPG11-222ENST00000560435 UBASH3BQ8TF42 649 aa6.72□□□□□ -1.33
SPG11-222ENST00000560435 COL26A1Q96A83 441 aa6.72□□□□□ -1.33
SPG11-222ENST00000560435 PBX4Q9BYU1 374 aa6.72□□□□□ -1.33
SPG11-222ENST00000560435 ADGRE2Q9UHX3 823 aa6.72□□□□□ -1.33
SPG11-222ENST00000560435 FNDC3AQ9Y2H6 1198 aaKnown RBP6.72□□□□□ -1.33
SPG11-222ENST00000560435 TNFRSF10BO14763 440 aa6.71□□□□□ -1.34
SPG11-222ENST00000560435 SART1O43290 800 aaKnown RBP6.71□□□□□ -1.34
SPG11-222ENST00000560435 PTPRAP18433 802 aa6.71□□□□□ -1.34
SPG11-222ENST00000560435 FZD5Q13467 585 aa6.71□□□□□ -1.34
SPG11-222ENST00000560435 BEND4Q6ZU67 534 aa6.71□□□□□ -1.34
SPG11-222ENST00000560435 WNT8BQ93098 351 aa6.71□□□□□ -1.34
SPG11-222ENST00000560435 PRIMPOLQ96LW4 560 aa6.71□□□□□ -1.34
SPG11-222ENST00000560435 ADAM19Q9H013 955 aa6.71□□□□□ -1.34
SPG11-222ENST00000560435 SEC31BQ9NQW1 1179 aa6.71□□□□□ -1.34
SPG11-222ENST00000560435 HIF3AQ9Y2N7 669 aa6.71□□□□□ -1.34
SPG11-222ENST00000560435 FAM177BA6PVY3 158 aa6.7□□□□□ -1.34
SPG11-222ENST00000560435 DDX3YO15523 660 aaKnown RBP6.7□□□□□ -1.34
SPG11-222ENST00000560435 BMP3P12645 472 aa6.7□□□□□ -1.34
SPG11-222ENST00000560435 PREPP48147 710 aa6.7□□□□□ -1.34
SPG11-222ENST00000560435 OCLNQ16625 522 aa6.7□□□□□ -1.34
SPG11-222ENST00000560435 CFAP70Q5T0N1 1121 aa6.7□□□□□ -1.34
SPG11-222ENST00000560435 KLHDC7BQ96G42 594 aa6.7□□□□□ -1.34
SPG11-222ENST00000560435 KCNF1Q9H3M0 494 aa6.7□□□□□ -1.34
SPG11-222ENST00000560435 SH2B1Q9NRF2 756 aaPredicted RBP6.7□□□□□ -1.34
SPG11-222ENST00000560435 ABI2Q9NYB9 513 aaPredicted RBP6.7□□□□□ -1.34
SPG11-222ENST00000560435 NOVA2Q9UNW9 492 aaKnown RBP6.7□□□□□ -1.34
SPG11-222ENST00000560435 ACIN1Q9UKV3 1341 aaKnown RBP6.7□□□□□ -1.34
SPG11-222ENST00000560435 H3BRJ5 948 aa6.69□□□□□ -1.34
SPG11-222ENST00000560435 PRMT3O60678 531 aa6.69□□□□□ -1.34
SPG11-222ENST00000560435 ZAP70P43403 619 aa6.69□□□□□ -1.34
SPG11-222ENST00000560435 PIP4K2BP78356 416 aa6.69□□□□□ -1.34
SPG11-222ENST00000560435 CEP120Q8N960 986 aa6.69□□□□□ -1.34
SPG11-222ENST00000560435 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
SPG11-222ENST00000560435 RNF208Q9H0X6 261 aa6.69□□□□□ -1.34
SPG11-222ENST00000560435 RFX1P22670 979 aa6.68□□□□□ -1.34
SPG11-222ENST00000560435 NCAPG2Q86XI2 1143 aa6.68□□□□□ -1.34
SPG11-222ENST00000560435 POP1Q99575 1024 aaKnown RBP6.68□□□□□ -1.34
SPG11-222ENST00000560435 OSGEPQ9NPF4 335 aa6.68□□□□□ -1.34
SPG11-222ENST00000560435 WDR64B1ANS9 1081 aa6.67□□□□□ -1.34
SPG11-222ENST00000560435 CYP2E1P05181 493 aaPredicted RBP6.67□□□□□ -1.34
SPG11-222ENST00000560435 CABP4P57796 275 aa6.67□□□□□ -1.34
SPG11-222ENST00000560435 RUSC1Q9BVN2 902 aa6.67□□□□□ -1.34
SPG11-222ENST00000560435 PIM2Q9P1W9 311 aa6.67□□□□□ -1.34
SPG11-222ENST00000560435 HOXA10P31260 410 aaPredicted RBP6.66□□□□□ -1.34
SPG11-222ENST00000560435 FDX2Q6P4F2 183 aa6.66□□□□□ -1.34
SPG11-222ENST00000560435 ABI1Q8IZP0 508 aa6.66□□□□□ -1.34
SPG11-222ENST00000560435 GIMAP7Q8NHV1 300 aa6.66□□□□□ -1.34
SPG11-222ENST00000560435 GPR152Q8TDT2 470 aa6.66□□□□□ -1.34
SPG11-222ENST00000560435 ZMYND15Q9H091 742 aa6.66□□□□□ -1.34
SPG11-222ENST00000560435 MEGF11A6BM72 1044 aa6.65□□□□□ -1.34
SPG11-222ENST00000560435 GAS2O43903 313 aaKnown RBP6.65□□□□□ -1.34
SPG11-222ENST00000560435 NLRP12P59046 1061 aa6.65□□□□□ -1.34
SPG11-222ENST00000560435 FAM69CQ0P6D2 419 aa6.65□□□□□ -1.34
SPG11-222ENST00000560435 ELOAQ14241 798 aaKnown RBP6.65□□□□□ -1.34
SPG11-222ENST00000560435 CPSF6Q16630 551 aaKnown RBP eCLIP6.65□□□□□ -1.34
SPG11-222ENST00000560435 CDCA8Q53HL2 280 aa6.65□□□□□ -1.34
SPG11-222ENST00000560435 PDE12Q6L8Q7 609 aaKnown RBP6.65□□□□□ -1.34
SPG11-222ENST00000560435 MFSD14AQ96MC6 490 aa6.65□□□□□ -1.34
SPG11-222ENST00000560435 CXXC1Q9P0U4 656 aaPredicted RBP6.65□□□□□ -1.34
SPG11-222ENST00000560435 MAP4P27816 1152 aaKnown RBP6.64□□□□□ -1.35
SPG11-222ENST00000560435 MSMPQ1L6U9 139 aa6.64□□□□□ -1.35
SPG11-222ENST00000560435 ABTB2Q8N961 1025 aa6.64□□□□□ -1.35
SPG11-222ENST00000560435 MKNK1Q9BUB5 465 aa6.64□□□□□ -1.35
SPG11-222ENST00000560435 ATG3Q9NT62 314 aa6.64□□□□□ -1.35
SPG11-222ENST00000560435 STIM2Q9P246 746 aa6.64□□□□□ -1.35
SPG11-222ENST00000560435 ZMIZ1Q9ULJ6 1067 aa6.64□□□□□ -1.35
SPG11-222ENST00000560435 ANGEL1Q9UNK9 670 aaKnown RBP6.64□□□□□ -1.35
SPG11-222ENST00000560435 LEMD3Q9Y2U8 911 aa6.64□□□□□ -1.35
SPG11-222ENST00000560435 FOSL1P15407 271 aa6.63□□□□□ -1.35
SPG11-222ENST00000560435 CAPN12Q6ZSI9 719 aa6.63□□□□□ -1.35
SPG11-222ENST00000560435 ELP3Q9H9T3 547 aa6.63□□□□□ -1.35
SPG11-222ENST00000560435 TMEM63CQ9P1W3 806 aa6.63□□□□□ -1.35
SPG11-222ENST00000560435 KANSL3Q9P2N6 904 aa6.63□□□□□ -1.35
SPG11-222ENST00000560435 SALL4Q9UJQ4 1053 aa6.63□□□□□ -1.35
SPG11-222ENST00000560435 NFKBIEO00221 500 aa6.62□□□□□ -1.35
SPG11-222ENST00000560435 ZBTB39O15060 712 aa6.62□□□□□ -1.35
SPG11-222ENST00000560435 PRNPP04156 253 aa6.62□□□□□ -1.35
SPG11-222ENST00000560435 F13BP05160 661 aa6.62□□□□□ -1.35
SPG11-222ENST00000560435 JAG1P78504 1218 aa6.62□□□□□ -1.35
SPG11-222ENST00000560435 NAA30Q147X3 362 aaPredicted RBP6.62□□□□□ -1.35
SPG11-222ENST00000560435 SGO2Q562F6 1265 aa6.62□□□□□ -1.35
SPG11-222ENST00000560435 CBLL1Q75N03 491 aa6.62□□□□□ -1.35
SPG11-222ENST00000560435 ARL4DP49703 201 aa6.61□□□□□ -1.35
SPG11-222ENST00000560435 C19orf57Q0VDD7 668 aa6.61□□□□□ -1.35
SPG11-222ENST00000560435 OGFOD2Q6N063 350 aa6.61□□□□□ -1.35
SPG11-222ENST00000560435 ZNF438Q7Z4V0 828 aa6.61□□□□□ -1.35
SPG11-222ENST00000560435 VSIG10LQ86VR7 867 aa6.61□□□□□ -1.35
SPG11-222ENST00000560435 STK32AQ8WU08 396 aa6.61□□□□□ -1.35
SPG11-222ENST00000560435 SLC7A3Q8WY07 619 aa6.61□□□□□ -1.35
SPG11-222ENST00000560435 FBXL18Q96ME1 805 aa6.61□□□□□ -1.35
SPG11-222ENST00000560435 OSBPL1AQ9BXW6 950 aa6.61□□□□□ -1.35
SPG11-222ENST00000560435 DZANK1Q9NVP4 752 aa6.61□□□□□ -1.35
SPG11-222ENST00000560435 CNTN3Q9P232 1028 aa6.61□□□□□ -1.35
SPG11-222ENST00000560435 CCDC39Q9UFE4 941 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms