RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 CROCC2H7BZ55 1655 aa8.44□□□□□ -1.06
USP8-210ENST00000560379 FAM13AO94988 1023 aa8.44□□□□□ -1.06
USP8-210ENST00000560379 RAD51AP2Q09MP3 1159 aa8.44□□□□□ -1.06
USP8-210ENST00000560379 MTFR1Q15390 333 aa8.44□□□□□ -1.06
USP8-210ENST00000560379 DPH6Q7L8W6 267 aa8.44□□□□□ -1.06
USP8-210ENST00000560379 GAS2L2Q8NHY3 880 aa8.44□□□□□ -1.06
USP8-210ENST00000560379 COL26A1Q96A83 441 aa8.44□□□□□ -1.06
USP8-210ENST00000560379 AIDAQ96BJ3 306 aa8.44□□□□□ -1.06
USP8-210ENST00000560379 ZIC5Q96T25 663 aa8.44□□□□□ -1.06
USP8-210ENST00000560379 MDFIQ99750 246 aa8.44□□□□□ -1.06
USP8-210ENST00000560379 M0R2N6 131 aa8.43□□□□□ -1.06
USP8-210ENST00000560379 NPR3P17342 541 aa8.43□□□□□ -1.06
USP8-210ENST00000560379 ADH6P28332 368 aa8.43□□□□□ -1.06
USP8-210ENST00000560379 PCBP4P57723 403 aaKnown RBP8.43□□□□□ -1.06
USP8-210ENST00000560379 GIMAP6Q6P9H5 292 aa8.43□□□□□ -1.06
USP8-210ENST00000560379 ANKRD13AQ8IZ07 590 aa8.43□□□□□ -1.06
USP8-210ENST00000560379 TMEM87AQ8NBN3 555 aa8.43□□□□□ -1.06
USP8-210ENST00000560379 SLC4A9Q96Q91 983 aa8.43□□□□□ -1.06
USP8-210ENST00000560379 SERTAD1Q9UHV2 236 aa8.43□□□□□ -1.06
USP8-210ENST00000560379 SCAPERQ9BY12 1400 aa8.43□□□□□ -1.06
USP8-210ENST00000560379 MLH3Q9UHC1 1453 aa8.43□□□□□ -1.06
USP8-210ENST00000560379 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.42□□□□□ -1.06
USP8-210ENST00000560379 KHNYNO15037 678 aaKnown RBP8.42□□□□□ -1.06
USP8-210ENST00000560379 TREHO43280 583 aa8.42□□□□□ -1.06
USP8-210ENST00000560379 FAM157BP0CG42 384 aa8.42□□□□□ -1.06
USP8-210ENST00000560379 XPCQ01831 940 aaPredicted RBP8.42□□□□□ -1.06
USP8-210ENST00000560379 FMR1Q06787 632 aaKnown RBP eCLIP8.42□□□□□ -1.06
USP8-210ENST00000560379 DOC2BQ14184 412 aa8.42□□□□□ -1.06
USP8-210ENST00000560379 NT5DC4Q86YG4 428 aa8.42□□□□□ -1.06
USP8-210ENST00000560379 FAM161BQ96MY7 647 aa8.42□□□□□ -1.06
USP8-210ENST00000560379 TANGO6Q9C0B7 1094 aa8.42□□□□□ -1.06
USP8-210ENST00000560379 AVENQ9NQS1 362 aaPredicted RBP8.42□□□□□ -1.06
USP8-210ENST00000560379 NOP53Q9NZM5 478 aaKnown RBP8.42□□□□□ -1.06
USP8-210ENST00000560379 CCDC141Q6ZP82 1450 aa8.42□□□□□ -1.06
USP8-210ENST00000560379 ARHGEF12Q9NZN5 1544 aa8.42□□□□□ -1.06
USP8-210ENST00000560379 DIP2CQ9Y2E4 1556 aa8.42□□□□□ -1.06
USP8-210ENST00000560379 MAST1Q9Y2H9 1570 aa8.42□□□□□ -1.06
USP8-210ENST00000560379 ABCA6Q8N139 1617 aa8.42□□□□□ -1.06
USP8-210ENST00000560379 PTPN23Q9H3S7 1636 aa8.42□□□□□ -1.06
USP8-210ENST00000560379 KIDINS220Q9ULH0 1771 aa8.41□□□□□ -1.06
USP8-210ENST00000560379 ADGBQ8N7X0 1667 aa8.41□□□□□ -1.06
USP8-210ENST00000560379 ATP7AQ04656 1500 aa8.41□□□□□ -1.06
USP8-210ENST00000560379 TCOF1Q13428 1488 aaKnown RBP8.41□□□□□ -1.06
USP8-210ENST00000560379 SHANK2Q9UPX8 1470 aa8.41□□□□□ -1.06
USP8-210ENST00000560379 FGD6Q6ZV73 1430 aa8.41□□□□□ -1.06
USP8-210ENST00000560379 EFSO43281 561 aa8.41□□□□□ -1.06
USP8-210ENST00000560379 NDUFB5O43674 189 aa8.41□□□□□ -1.06
USP8-210ENST00000560379 NCLP19338 710 aaKnown RBP8.41□□□□□ -1.06
USP8-210ENST00000560379 ZNF468Q5VIY5 522 aaPredicted RBP8.41□□□□□ -1.06
USP8-210ENST00000560379 METTL16Q86W50 562 aaKnown RBP8.41□□□□□ -1.06
USP8-210ENST00000560379 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.41□□□□□ -1.06
USP8-210ENST00000560379 KRTAP9-2Q9BYQ4 174 aa8.41□□□□□ -1.06
USP8-210ENST00000560379 DNMT1P26358 1616 aaKnown RBP8.4□□□□□ -1.06
USP8-210ENST00000560379 PLXNC1O60486 1568 aa8.4□□□□□ -1.06
USP8-210ENST00000560379 MBD5Q9P267 1494 aa8.4□□□□□ -1.06
USP8-210ENST00000560379 A6NJY4 79 aa8.4□□□□□ -1.06
USP8-210ENST00000560379 PIK3R2O00459 728 aa8.4□□□□□ -1.06
USP8-210ENST00000560379 MPSTP25325 297 aa8.4□□□□□ -1.06
USP8-210ENST00000560379 ARSJQ5FYB0 599 aaPredicted RBP8.4□□□□□ -1.06
USP8-210ENST00000560379 TMED8Q6PL24 325 aaPredicted RBP8.4□□□□□ -1.06
USP8-210ENST00000560379 TMC1Q8TDI8 760 aa8.4□□□□□ -1.06
USP8-210ENST00000560379 ZDHHC1Q8WTX9 485 aa8.4□□□□□ -1.06
USP8-210ENST00000560379 MRS2Q9HD23 443 aa8.4□□□□□ -1.06
USP8-210ENST00000560379 ZDHHC3Q9NYG2 299 aa8.4□□□□□ -1.06
USP8-210ENST00000560379 CFDP1Q9UEE9 299 aaPredicted RBP8.4□□□□□ -1.06
USP8-210ENST00000560379 PARP2Q9UGN5 583 aa8.4□□□□□ -1.06
USP8-210ENST00000560379 C9orf84Q5VXU9 1444 aa8.39□□□□□ -1.07
USP8-210ENST00000560379 CDK2AP1O14519 115 aa8.39□□□□□ -1.07
USP8-210ENST00000560379 LDHBP07195 334 aaKnown RBP8.39□□□□□ -1.07
USP8-210ENST00000560379 IGFBP4P22692 258 aa8.39□□□□□ -1.07
USP8-210ENST00000560379 TXLNAP40222 546 aa8.39□□□□□ -1.07
USP8-210ENST00000560379 MAPK8P45983 427 aa8.39□□□□□ -1.07
USP8-210ENST00000560379 FGD1P98174 961 aa8.39□□□□□ -1.07
USP8-210ENST00000560379 FOXD4L6Q3SYB3 417 aaPredicted RBP8.39□□□□□ -1.07
USP8-210ENST00000560379 FOXD4L3Q6VB84 417 aaPredicted RBP8.39□□□□□ -1.07
USP8-210ENST00000560379 DNAJC2Q99543 621 aaKnown RBP8.39□□□□□ -1.07
USP8-210ENST00000560379 DUSP9Q99956 384 aaKnown RBP8.39□□□□□ -1.07
USP8-210ENST00000560379 TINF2Q9BSI4 451 aa8.39□□□□□ -1.07
USP8-210ENST00000560379 PLVAPQ9BX97 442 aa8.39□□□□□ -1.07
USP8-210ENST00000560379 SEMA6BQ9H3T3 888 aa8.39□□□□□ -1.07
USP8-210ENST00000560379 PARP3Q9Y6F1 533 aa8.39□□□□□ -1.07
USP8-210ENST00000560379 BCORL1Q5H9F3 1711 aa8.39□□□□□ -1.07
USP8-210ENST00000560379 AGLP35573 1532 aa8.39□□□□□ -1.07
USP8-210ENST00000560379 RTEL1-TNFRSF6BF6WH68 1400 aa8.38□□□□□ -1.07
USP8-210ENST00000560379 TRAPPC8Q9Y2L5 1435 aa8.38□□□□□ -1.07
USP8-210ENST00000560379 ANKRD62A6NC57 917 aa8.38□□□□□ -1.07
USP8-210ENST00000560379 FOXO3O43524 673 aa8.38□□□□□ -1.07
USP8-210ENST00000560379 PRPF40AO75400 957 aaKnown RBP8.38□□□□□ -1.07
USP8-210ENST00000560379 PLCB3Q01970 1234 aa8.38□□□□□ -1.07
USP8-210ENST00000560379 COL9A3Q14050 684 aaPredicted RBP8.38□□□□□ -1.07
USP8-210ENST00000560379 DSC3Q14574 896 aa8.38□□□□□ -1.07
USP8-210ENST00000560379 NBPF1Q3BBV0 1214 aa8.38□□□□□ -1.07
USP8-210ENST00000560379 SAMD5Q5TGI4 173 aa8.38□□□□□ -1.07
USP8-210ENST00000560379 PSMG3-AS1Q96PY0 264 aa8.38□□□□□ -1.07
USP8-210ENST00000560379 RNF19AQ9NV58 838 aa8.38□□□□□ -1.07
USP8-210ENST00000560379 ZNF358Q9NW07 568 aa8.38□□□□□ -1.07
USP8-210ENST00000560379 KRTAP9-6A0A140TA67 174 aa8.37□□□□□ -1.07
USP8-210ENST00000560379 SORBS3O60504 671 aa8.37□□□□□ -1.07
USP8-210ENST00000560379 FANCCQ00597 558 aa8.37□□□□□ -1.07
USP8-210ENST00000560379 RSPO4Q2I0M5 234 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms