RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 CD44P16070 742 aaKnown RBP13.59□□□□□ -0.23
APH1B-208ENST00000560353 SF3B3Q15393 1217 aaKnown RBP13.59□□□□□ -0.23
APH1B-208ENST00000560353 SLC4A8Q2Y0W8 1093 aa13.59□□□□□ -0.23
APH1B-208ENST00000560353 LRP10Q7Z4F1 713 aa13.59□□□□□ -0.23
APH1B-208ENST00000560353 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
APH1B-208ENST00000560353 SLC10A4Q96EP9 437 aa13.59□□□□□ -0.23
APH1B-208ENST00000560353 THUMPD2Q9BTF0 503 aaKnown RBP13.59□□□□□ -0.23
APH1B-208ENST00000560353 PODXL2Q9NZ53 605 aa13.59□□□□□ -0.23
APH1B-208ENST00000560353 RBM27Q9P2N5 1060 aaKnown RBP13.59□□□□□ -0.23
APH1B-208ENST00000560353 DDX60Q8IY21 1712 aaKnown RBP13.59□□□□□ -0.23
APH1B-208ENST00000560353 LAMB2P55268 1798 aa13.58□□□□□ -0.23
APH1B-208ENST00000560353 RPS8P62241 208 aaKnown RBP13.58□□□□□ -0.24
APH1B-208ENST00000560353 SP3Q02447 781 aa13.58□□□□□ -0.24
APH1B-208ENST00000560353 ARHGEF6Q15052 776 aa13.58□□□□□ -0.24
APH1B-208ENST00000560353 PDIA6Q15084 440 aa13.58□□□□□ -0.24
APH1B-208ENST00000560353 NBPF9Q3BBW0 867 aa13.58□□□□□ -0.24
APH1B-208ENST00000560353 OTUD7BQ6GQQ9 843 aa13.58□□□□□ -0.24
APH1B-208ENST00000560353 USP17L3A6NCW0 530 aa13.57□□□□□ -0.24
APH1B-208ENST00000560353 USP17L4A6NCW7 530 aa13.57□□□□□ -0.24
APH1B-208ENST00000560353 UFL1O94874 794 aa13.57□□□□□ -0.24
APH1B-208ENST00000560353 ZBTB48P10074 688 aaPredicted RBP13.57□□□□□ -0.24
APH1B-208ENST00000560353 PRKG1Q13976 671 aa13.57□□□□□ -0.24
APH1B-208ENST00000560353 SLC9C1Q4G0N8 1177 aa13.57□□□□□ -0.24
APH1B-208ENST00000560353 USP17L1Q7RTZ2 530 aa13.57□□□□□ -0.24
APH1B-208ENST00000560353 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
APH1B-208ENST00000560353 ANKIB1Q9P2G1 1089 aa13.57□□□□□ -0.24
APH1B-208ENST00000560353 IGF2BP3O00425 579 aaKnown RBP eCLIP13.56□□□□□ -0.24
APH1B-208ENST00000560353 CLCN6P51797 869 aa13.56□□□□□ -0.24
APH1B-208ENST00000560353 CRHR2Q13324 411 aa13.56□□□□□ -0.24
APH1B-208ENST00000560353 COPS6Q7L5N1 327 aa13.56□□□□□ -0.24
APH1B-208ENST00000560353 GGA1Q9UJY5 639 aa13.56□□□□□ -0.24
APH1B-208ENST00000560353 ANGEL1Q9UNK9 670 aaKnown RBP13.56□□□□□ -0.24
APH1B-208ENST00000560353 TAF1P21675 1872 aa13.55□□□□□ -0.24
APH1B-208ENST00000560353 SCN9AQ15858 1988 aa13.55□□□□□ -0.24
APH1B-208ENST00000560353 MMP14P50281 582 aa13.55□□□□□ -0.24
APH1B-208ENST00000560353 PODNQ7Z5L7 613 aa13.55□□□□□ -0.24
APH1B-208ENST00000560353 DPF3Q92784 378 aa13.55□□□□□ -0.24
APH1B-208ENST00000560353 UNCXA6NJT0 531 aa13.54□□□□□ -0.24
APH1B-208ENST00000560353 WNT10BO00744 389 aa13.54□□□□□ -0.24
APH1B-208ENST00000560353 EIF2S2P20042 333 aaKnown RBP13.54□□□□□ -0.24
APH1B-208ENST00000560353 AIMP1Q12904 312 aaKnown RBP13.54□□□□□ -0.24
APH1B-208ENST00000560353 CNGB1Q14028 1251 aaPredicted RBP13.54□□□□□ -0.24
APH1B-208ENST00000560353 PROSER3Q2NL68 480 aa13.54□□□□□ -0.24
APH1B-208ENST00000560353 APOBEC3FQ8IUX4 373 aaKnown RBP13.54□□□□□ -0.24
APH1B-208ENST00000560353 XAGE3Q8WTP9 111 aa13.54□□□□□ -0.24
APH1B-208ENST00000560353 ANXA1P04083 346 aa13.53□□□□□ -0.24
APH1B-208ENST00000560353 NEFMP07197 916 aa13.53□□□□□ -0.24
APH1B-208ENST00000560353 FAM89AQ96GI7 184 aa13.53□□□□□ -0.24
APH1B-208ENST00000560353 WNK4Q96J92 1243 aa13.53□□□□□ -0.24
APH1B-208ENST00000560353 PRO3102Q9H379 93 aa13.53□□□□□ -0.24
APH1B-208ENST00000560353 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
APH1B-208ENST00000560353 A0A1W2PPC1 479 aa13.52□□□□□ -0.25
APH1B-208ENST00000560353 MAP3K11Q16584 847 aa13.52□□□□□ -0.25
APH1B-208ENST00000560353 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.52□□□□□ -0.25
APH1B-208ENST00000560353 PTCH2Q9Y6C5 1203 aa13.52□□□□□ -0.25
APH1B-208ENST00000560353 MYO3BQ8WXR4 1341 aa13.51□□□□□ -0.25
APH1B-208ENST00000560353 WTIPA6NIX2 430 aaPredicted RBP13.51□□□□□ -0.25
APH1B-208ENST00000560353 PPP1R12BO60237 982 aaPredicted RBP13.51□□□□□ -0.25
APH1B-208ENST00000560353 MYCP01106 439 aaPredicted RBP13.51□□□□□ -0.25
APH1B-208ENST00000560353 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
APH1B-208ENST00000560353 ZNF428Q96B54 188 aa13.51□□□□□ -0.25
APH1B-208ENST00000560353 NR2E3Q9Y5X4 410 aa13.51□□□□□ -0.25
APH1B-208ENST00000560353 IRS4O14654 1257 aaPredicted RBP13.5□□□□□ -0.25
APH1B-208ENST00000560353 HSP90B1P14625 803 aaKnown RBP13.5□□□□□ -0.25
APH1B-208ENST00000560353 CAP1Q01518 475 aa13.5□□□□□ -0.25
APH1B-208ENST00000560353 DACT2Q5SW24 774 aa13.5□□□□□ -0.25
APH1B-208ENST00000560353 CLMNQ96JQ2 1002 aa13.5□□□□□ -0.25
APH1B-208ENST00000560353 HTATIP2Q9BUP3 242 aa13.5□□□□□ -0.25
APH1B-208ENST00000560353 XDHP47989 1333 aa13.49□□□□□ -0.25
APH1B-208ENST00000560353 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
APH1B-208ENST00000560353 SASH1O94885 1247 aa13.49□□□□□ -0.25
APH1B-208ENST00000560353 PTPN18Q99952 460 aa13.49□□□□□ -0.25
APH1B-208ENST00000560353 ISCA1Q9BUE6 129 aa13.49□□□□□ -0.25
APH1B-208ENST00000560353 DEFB129Q9H1M3 183 aa13.49□□□□□ -0.25
APH1B-208ENST00000560353 TSPYL4Q9UJ04 414 aa13.49□□□□□ -0.25
APH1B-208ENST00000560353 FZD1Q9UP38 647 aa13.49□□□□□ -0.25
APH1B-208ENST00000560353 ATP2B4P23634 1241 aa13.48□□□□□ -0.25
APH1B-208ENST00000560353 SUPT20HL1Q3ZLR7 823 aa13.48□□□□□ -0.25
APH1B-208ENST00000560353 STRIP1Q5VSL9 837 aa13.48□□□□□ -0.25
APH1B-208ENST00000560353 ANKRD13DQ6ZTN6 518 aa13.48□□□□□ -0.25
APH1B-208ENST00000560353 PLBD2Q8NHP8 589 aa13.48□□□□□ -0.25
APH1B-208ENST00000560353 NKX2-3Q8TAU0 364 aa13.48□□□□□ -0.25
APH1B-208ENST00000560353 SEC31BQ9NQW1 1179 aa13.48□□□□□ -0.25
APH1B-208ENST00000560353 COL1A1P02452 1464 aaPredicted RBP13.48□□□□□ -0.25
APH1B-208ENST00000560353 UNC80Q8N2C7 3258 aa13.47□□□□□ -0.25
APH1B-208ENST00000560353 NFE2L2Q16236 605 aa13.47□□□□□ -0.25
APH1B-208ENST00000560353 RTL5Q5HYW3 569 aaPredicted RBP13.47□□□□□ -0.25
APH1B-208ENST00000560353 SH3TC2Q8TF17 1288 aa13.47□□□□□ -0.25
APH1B-208ENST00000560353 MXD3Q9BW11 206 aa13.47□□□□□ -0.25
APH1B-208ENST00000560353 ZFYVE28Q9HCC9 887 aa13.47□□□□□ -0.25
APH1B-208ENST00000560353 PPP2R3BQ9Y5P8 575 aa13.47□□□□□ -0.25
APH1B-208ENST00000560353 LAMA3Q16787 3333 aa13.47□□□□□ -0.25
APH1B-208ENST00000560353 COL4A1P02462 1669 aa13.47□□□□□ -0.25
APH1B-208ENST00000560353 PSME4Q14997 1843 aa13.46□□□□□ -0.25
APH1B-208ENST00000560353 ATP5J2-PTCD1G3V325 749 aa13.46□□□□□ -0.25
APH1B-208ENST00000560353 IREB2P48200 963 aaKnown RBP13.46□□□□□ -0.25
APH1B-208ENST00000560353 TRIM28Q13263 835 aaKnown RBP13.46□□□□□ -0.25
APH1B-208ENST00000560353 CCDC152Q4G0S7 254 aa13.46□□□□□ -0.25
APH1B-208ENST00000560353 FBXW7Q969H0 707 aa13.46□□□□□ -0.25
APH1B-208ENST00000560353 ZBED3Q96IU2 234 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms