RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 ATP8B2P98198 1209 aa10.65□□□□□ -0.7
USP3-217ENST00000560070 MVPQ14764 893 aaKnown RBP10.65□□□□□ -0.7
USP3-217ENST00000560070 TAF1DQ9H5J8 278 aaPredicted RBP10.65□□□□□ -0.7
USP3-217ENST00000560070 CEP126Q9P2H0 1117 aa10.65□□□□□ -0.7
USP3-217ENST00000560070 CNOT7Q9UIV1 285 aaKnown RBP10.65□□□□□ -0.7
USP3-217ENST00000560070 IQSEC3Q9UPP2 1182 aaPredicted RBP10.65□□□□□ -0.7
USP3-217ENST00000560070 USP17L3A6NCW0 530 aa10.64□□□□□ -0.71
USP3-217ENST00000560070 USP17L4A6NCW7 530 aa10.64□□□□□ -0.71
USP3-217ENST00000560070 TOMM70O94826 608 aa10.64□□□□□ -0.71
USP3-217ENST00000560070 PDE8BO95263 885 aa10.64□□□□□ -0.71
USP3-217ENST00000560070 EPHX2P34913 555 aa10.64□□□□□ -0.71
USP3-217ENST00000560070 GTF2IP78347 998 aa10.64□□□□□ -0.71
USP3-217ENST00000560070 G3BP1Q13283 466 aaKnown RBP eCLIP10.64□□□□□ -0.71
USP3-217ENST00000560070 USP17L1Q7RTZ2 530 aa10.64□□□□□ -0.71
USP3-217ENST00000560070 ATG9AQ7Z3C6 839 aa10.64□□□□□ -0.71
USP3-217ENST00000560070 COA1Q9GZY4 146 aa10.64□□□□□ -0.71
USP3-217ENST00000560070 CD209Q9NNX6 404 aa10.64□□□□□ -0.71
USP3-217ENST00000560070 COL4A5P29400 1685 aa10.63□□□□□ -0.71
USP3-217ENST00000560070 IQCA1LA6NCM1 817 aa10.63□□□□□ -0.71
USP3-217ENST00000560070 H7C1D1 291 aa10.63□□□□□ -0.71
USP3-217ENST00000560070 FRAT2O75474 233 aaPredicted RBP10.63□□□□□ -0.71
USP3-217ENST00000560070 VIL1P09327 827 aaKnown RBP10.63□□□□□ -0.71
USP3-217ENST00000560070 HIBADHP31937 336 aaKnown RBP10.63□□□□□ -0.71
USP3-217ENST00000560070 BCAMP50895 628 aa10.63□□□□□ -0.71
USP3-217ENST00000560070 SCNN1DP51172 638 aa10.63□□□□□ -0.71
USP3-217ENST00000560070 TIMM10P62072 90 aa10.63□□□□□ -0.71
USP3-217ENST00000560070 TFCP2Q12800 502 aa10.63□□□□□ -0.71
USP3-217ENST00000560070 OS9Q13438 667 aaPredicted RBP10.63□□□□□ -0.71
USP3-217ENST00000560070 UBE4AQ14139 1066 aa10.63□□□□□ -0.71
USP3-217ENST00000560070 TTLL5Q6EMB2 1281 aa10.63□□□□□ -0.71
USP3-217ENST00000560070 ZNF804AQ7Z570 1209 aa10.63□□□□□ -0.71
USP3-217ENST00000560070 PODNQ7Z5L7 613 aa10.63□□□□□ -0.71
USP3-217ENST00000560070 VPS37DQ86XT2 251 aa10.63□□□□□ -0.71
USP3-217ENST00000560070 L3MBTL3Q96JM7 780 aaPredicted RBP10.63□□□□□ -0.71
USP3-217ENST00000560070 FAM84BQ96KN1 310 aaPredicted RBP10.63□□□□□ -0.71
USP3-217ENST00000560070 SURF6O75683 361 aaKnown RBP10.62□□□□□ -0.71
USP3-217ENST00000560070 IFIT1P09914 478 aaKnown RBP10.62□□□□□ -0.71
USP3-217ENST00000560070 IL15P40933 162 aaPredicted RBP10.62□□□□□ -0.71
USP3-217ENST00000560070 RRP1P56182 461 aaKnown RBP10.62□□□□□ -0.71
USP3-217ENST00000560070 CHAF1AQ13111 956 aaPredicted RBP10.62□□□□□ -0.71
USP3-217ENST00000560070 PDE3AQ14432 1141 aa10.62□□□□□ -0.71
USP3-217ENST00000560070 TBC1D10BQ4KMP7 808 aaPredicted RBP10.62□□□□□ -0.71
USP3-217ENST00000560070 CAVIN4Q5BKX8 364 aa10.62□□□□□ -0.71
USP3-217ENST00000560070 RSBN1LQ6PCB5 846 aaPredicted RBP10.62□□□□□ -0.71
USP3-217ENST00000560070 SAMD7Q7Z3H4 446 aa10.62□□□□□ -0.71
USP3-217ENST00000560070 MICALL2Q8IY33 904 aa10.62□□□□□ -0.71
USP3-217ENST00000560070 NEUROD6Q96NK8 337 aa10.62□□□□□ -0.71
USP3-217ENST00000560070 COPRSQ9NQ92 184 aa10.62□□□□□ -0.71
USP3-217ENST00000560070 GPRC5DQ9NZD1 345 aa10.62□□□□□ -0.71
USP3-217ENST00000560070 DDX19BQ9UMR2 479 aa10.62□□□□□ -0.71
USP3-217ENST00000560070 MED23Q9ULK4 1368 aa10.62□□□□□ -0.71
USP3-217ENST00000560070 ANKRD36CQ5JPF3 1778 aa10.62□□□□□ -0.71
USP3-217ENST00000560070 F8W031 263 aaPredicted RBP10.61□□□□□ -0.71
USP3-217ENST00000560070 APBB1O00213 710 aa10.61□□□□□ -0.71
USP3-217ENST00000560070 CIAO1O76071 339 aa10.61□□□□□ -0.71
USP3-217ENST00000560070 SLC5A1P13866 664 aa10.61□□□□□ -0.71
USP3-217ENST00000560070 MTX1Q13505 466 aa10.61□□□□□ -0.71
USP3-217ENST00000560070 PUM3Q15397 648 aaKnown RBP10.61□□□□□ -0.71
USP3-217ENST00000560070 ATP2B3Q16720 1220 aa10.61□□□□□ -0.71
USP3-217ENST00000560070 CEP85Q6P2H3 762 aa10.61□□□□□ -0.71
USP3-217ENST00000560070 VGLL2Q8N8G2 317 aa10.61□□□□□ -0.71
USP3-217ENST00000560070 RBM46Q8TBY0 533 aaKnown RBP10.61□□□□□ -0.71
USP3-217ENST00000560070 ZBTB40Q9NUA8 1239 aa10.61□□□□□ -0.71
USP3-217ENST00000560070 SUPT16HQ9Y5B9 1047 aaKnown RBP10.61□□□□□ -0.71
USP3-217ENST00000560070 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.61□□□□□ -0.71
USP3-217ENST00000560070 DDX60Q8IY21 1712 aaKnown RBP10.61□□□□□ -0.71
USP3-217ENST00000560070 IRS2Q9Y4H2 1338 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 FGFR2P21802 821 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 ADORA1P30542 326 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 HIRAP54198 1017 aaPredicted RBP10.6□□□□□ -0.71
USP3-217ENST00000560070 POLA2Q14181 598 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 DACT2Q5SW24 774 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 STRIP1Q5VSL9 837 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 MAP1SQ66K74 1059 aaPredicted RBP10.6□□□□□ -0.71
USP3-217ENST00000560070 CHADLQ6NUI6 762 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 C15orf52Q6ZUT6 534 aaKnown RBP10.6□□□□□ -0.71
USP3-217ENST00000560070 FBXO33Q7Z6M2 555 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 PNMA8AQ86V59 439 aaPredicted RBP10.6□□□□□ -0.71
USP3-217ENST00000560070 KIAA0825Q8IV33 1275 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 SMC1BQ8NDV3 1235 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 TRPM4Q8TD43 1214 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 SSH3Q8TE77 659 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 LPIN2Q92539 896 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 DPF2Q92785 391 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 CRBNQ96SW2 442 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 ADARB2Q9NS39 739 aaKnown RBP10.6□□□□□ -0.71
USP3-217ENST00000560070 DLEC1Q9Y238 1755 aa10.6□□□□□ -0.71
USP3-217ENST00000560070 BRCA1P38398 1863 aaKnown RBP10.59□□□□□ -0.71
USP3-217ENST00000560070 EGFRP00533 1210 aa10.59□□□□□ -0.71
USP3-217ENST00000560070 IL1R1P14778 569 aa10.59□□□□□ -0.71
USP3-217ENST00000560070 RPS12P25398 132 aaKnown RBP10.59□□□□□ -0.71
USP3-217ENST00000560070 HTRA3P83110 453 aa10.59□□□□□ -0.71
USP3-217ENST00000560070 FMR1Q06787 632 aaKnown RBP eCLIP10.59□□□□□ -0.71
USP3-217ENST00000560070 GORABQ5T7V8 394 aa10.59□□□□□ -0.71
USP3-217ENST00000560070 USP50Q70EL3 339 aaPredicted RBP10.59□□□□□ -0.71
USP3-217ENST00000560070 TDRD7Q8NHU6 1098 aaKnown RBP10.59□□□□□ -0.71
USP3-217ENST00000560070 EXOC6BQ9Y2D4 811 aa10.59□□□□□ -0.71
USP3-217ENST00000560070 ARFGEF1Q9Y6D6 1849 aa10.58□□□□□ -0.72
USP3-217ENST00000560070 DUOX1Q9NRD9 1551 aa10.58□□□□□ -0.72
USP3-217ENST00000560070 SASH1O94885 1247 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms