RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 ZC3H15Q8WU90 426 aaKnown RBP15.84■□□□□ 0.13
LRRC28-214ENST00000559433 API5Q9BZZ5 524 aaKnown RBP15.84■□□□□ 0.13
LRRC28-214ENST00000559433 CNNM1Q9NRU3 951 aa15.84■□□□□ 0.13
LRRC28-214ENST00000559433 ABT1Q9ULW3 272 aaKnown RBP15.84■□□□□ 0.13
LRRC28-214ENST00000559433 KIF16BQ96L93 1317 aa15.84■□□□□ 0.13
LRRC28-214ENST00000559433 ZNF609O15014 1411 aa15.84■□□□□ 0.13
LRRC28-214ENST00000559433 USP17L3A6NCW0 530 aa15.83■□□□□ 0.12
LRRC28-214ENST00000559433 USP17L4A6NCW7 530 aa15.83■□□□□ 0.12
LRRC28-214ENST00000559433 KLRK1P26718 216 aa15.83■□□□□ 0.12
LRRC28-214ENST00000559433 TBC1D10BQ4KMP7 808 aaPredicted RBP15.83■□□□□ 0.12
LRRC28-214ENST00000559433 RSBN1LQ6PCB5 846 aaPredicted RBP15.83■□□□□ 0.12
LRRC28-214ENST00000559433 USP17L1Q7RTZ2 530 aa15.83■□□□□ 0.12
LRRC28-214ENST00000559433 SAMD7Q7Z3H4 446 aa15.83■□□□□ 0.12
LRRC28-214ENST00000559433 TXNRD3Q86VQ6 643 aa15.83■□□□□ 0.12
LRRC28-214ENST00000559433 FBXW7Q969H0 707 aa15.83■□□□□ 0.12
LRRC28-214ENST00000559433 COA1Q9GZY4 146 aa15.83■□□□□ 0.12
LRRC28-214ENST00000559433 USP44Q9H0E7 712 aa15.83■□□□□ 0.12
LRRC28-214ENST00000559433 POLR2AP24928 1970 aaKnown RBP15.82■□□□□ 0.12
LRRC28-214ENST00000559433 PLIN1O60240 522 aa15.82■□□□□ 0.12
LRRC28-214ENST00000559433 HIRAP54198 1017 aaPredicted RBP15.82■□□□□ 0.12
LRRC28-214ENST00000559433 DEFB115Q30KQ5 88 aa15.82■□□□□ 0.12
LRRC28-214ENST00000559433 RABL6Q3YEC7 729 aaPredicted RBP15.82■□□□□ 0.12
LRRC28-214ENST00000559433 ANKRD44Q8N8A2 993 aa15.82■□□□□ 0.12
LRRC28-214ENST00000559433 AGBL3Q8NEM8 1001 aa15.82■□□□□ 0.12
LRRC28-214ENST00000559433 SNAP23O00161 211 aa15.81■□□□□ 0.12
LRRC28-214ENST00000559433 TRAF5O00463 557 aa15.81■□□□□ 0.12
LRRC28-214ENST00000559433 KIF4BQ2VIQ3 1234 aa15.81■□□□□ 0.12
LRRC28-214ENST00000559433 CDC37L1Q7L3B6 337 aa15.81■□□□□ 0.12
LRRC28-214ENST00000559433 EGFRP00533 1210 aa15.8■□□□□ 0.12
LRRC28-214ENST00000559433 FMR1Q06787 632 aaKnown RBP eCLIP15.8■□□□□ 0.12
LRRC28-214ENST00000559433 PAXIP1Q6ZW49 1069 aaPredicted RBP15.8■□□□□ 0.12
LRRC28-214ENST00000559433 DCPSQ96C86 337 aaKnown RBP15.8■□□□□ 0.12
LRRC28-214ENST00000559433 GLIS2Q9BZE0 524 aaPredicted RBP15.8■□□□□ 0.12
LRRC28-214ENST00000559433 PGAP2Q9UHJ9 254 aa15.8■□□□□ 0.12
LRRC28-214ENST00000559433 CNTNAP1P78357 1384 aa15.79■□□□□ 0.12
LRRC28-214ENST00000559433 ZBED9Q6R2W3 1325 aa15.79■□□□□ 0.12
LRRC28-214ENST00000559433 IRS2Q9Y4H2 1338 aa15.79■□□□□ 0.12
LRRC28-214ENST00000559433 UBTFL1P0CB47 393 aaPredicted RBP15.79■□□□□ 0.12
LRRC28-214ENST00000559433 STRIP1Q5VSL9 837 aa15.79■□□□□ 0.12
LRRC28-214ENST00000559433 ARHGAP45Q92619 1136 aa15.79■□□□□ 0.12
LRRC28-214ENST00000559433 MXD3Q9BW11 206 aa15.79■□□□□ 0.12
LRRC28-214ENST00000559433 PUS3Q9BZE2 481 aaKnown RBP15.79■□□□□ 0.12
LRRC28-214ENST00000559433 MROH5Q6ZUA9 1318 aa15.78■□□□□ 0.12
LRRC28-214ENST00000559433 MYO3BQ8WXR4 1341 aa15.78■□□□□ 0.12
LRRC28-214ENST00000559433 IPO8O15397 1037 aaKnown RBP15.78■□□□□ 0.12
LRRC28-214ENST00000559433 BCAR3O75815 825 aa15.78■□□□□ 0.12
LRRC28-214ENST00000559433 CELF2O95319 508 aaKnown RBP15.78■□□□□ 0.12
LRRC28-214ENST00000559433 USP17L8P0C7I0 530 aa15.78■□□□□ 0.12
LRRC28-214ENST00000559433 ZNF280AP59817 542 aaPredicted RBP15.78■□□□□ 0.12
LRRC28-214ENST00000559433 DACT2Q5SW24 774 aa15.78■□□□□ 0.12
LRRC28-214ENST00000559433 C15orf52Q6ZUT6 534 aaKnown RBP15.78■□□□□ 0.12
LRRC28-214ENST00000559433 ZNF804AQ7Z570 1209 aa15.78■□□□□ 0.12
LRRC28-214ENST00000559433 USP48Q86UV5 1035 aa15.78■□□□□ 0.12
LRRC28-214ENST00000559433 OGFOD1Q8N543 542 aa15.78■□□□□ 0.12
LRRC28-214ENST00000559433 FRAT1Q92837 279 aaPredicted RBP15.78■□□□□ 0.12
LRRC28-214ENST00000559433 GMLQ99445 158 aa15.78■□□□□ 0.12
LRRC28-214ENST00000559433 ZNF408Q9H9D4 720 aa15.78■□□□□ 0.12
LRRC28-214ENST00000559433 CD209Q9NNX6 404 aa15.78■□□□□ 0.12
LRRC28-214ENST00000559433 VEGFBP49765 207 aa15.77■□□□□ 0.12
LRRC28-214ENST00000559433 GTF2IP78347 998 aa15.77■□□□□ 0.12
LRRC28-214ENST00000559433 TTLL5Q6EMB2 1281 aa15.77■□□□□ 0.12
LRRC28-214ENST00000559433 KLHDC4Q8TBB5 520 aa15.77■□□□□ 0.12
LRRC28-214ENST00000559433 AIDAQ96BJ3 306 aa15.77■□□□□ 0.12
LRRC28-214ENST00000559433 MYOZ2Q9NPC6 264 aa15.77■□□□□ 0.12
LRRC28-214ENST00000559433 RIPOR2Q9Y4F9 1068 aa15.77■□□□□ 0.12
LRRC28-214ENST00000559433 PCNTO95613 3336 aa15.77■□□□□ 0.11
LRRC28-214ENST00000559433 ECE1P42892 770 aa15.76■□□□□ 0.11
LRRC28-214ENST00000559433 GRM1Q13255 1194 aa15.76■□□□□ 0.11
LRRC28-214ENST00000559433 LRRC24Q50LG9 513 aa15.76■□□□□ 0.11
LRRC28-214ENST00000559433 METTL24Q5JXM2 366 aa15.76■□□□□ 0.11
LRRC28-214ENST00000559433 KRT26Q7Z3Y9 468 aa15.76■□□□□ 0.11
LRRC28-214ENST00000559433 GGA3Q9NZ52 723 aa15.76■□□□□ 0.11
LRRC28-214ENST00000559433 HDAC5Q9UQL6 1122 aa15.76■□□□□ 0.11
LRRC28-214ENST00000559433 ARAP2Q8WZ64 1704 aa15.75■□□□□ 0.11
LRRC28-214ENST00000559433 RASSF10A6NK89 507 aa15.75■□□□□ 0.11
LRRC28-214ENST00000559433 HSPA1AP0DMV8 641 aaKnown RBP15.75■□□□□ 0.11
LRRC28-214ENST00000559433 HSPA1BP0DMV9 641 aaKnown RBP15.75■□□□□ 0.11
LRRC28-214ENST00000559433 TRIM27P14373 513 aa15.75■□□□□ 0.11
LRRC28-214ENST00000559433 UBE4AQ14139 1066 aa15.75■□□□□ 0.11
LRRC28-214ENST00000559433 CST9Q5W186 159 aa15.75■□□□□ 0.11
LRRC28-214ENST00000559433 INTS3Q68E01 1043 aaKnown RBP15.75■□□□□ 0.11
LRRC28-214ENST00000559433 ATF7IPQ6VMQ6 1270 aa15.75■□□□□ 0.11
LRRC28-214ENST00000559433 SULF1Q8IWU6 871 aa15.75■□□□□ 0.11
LRRC28-214ENST00000559433 MEIS3Q99687 375 aa15.75■□□□□ 0.11
LRRC28-214ENST00000559433 LRRFIP2Q9Y608 721 aaKnown RBP15.75■□□□□ 0.11
LRRC28-214ENST00000559433 ASTN2O75129 1339 aaPredicted RBP15.74■□□□□ 0.11
LRRC28-214ENST00000559433 ADM5C9JUS6 153 aa15.74■□□□□ 0.11
LRRC28-214ENST00000559433 IL1R1P14778 569 aa15.74■□□□□ 0.11
LRRC28-214ENST00000559433 SCARF1Q14162 830 aa15.74■□□□□ 0.11
LRRC28-214ENST00000559433 KIAA0825Q8IV33 1275 aa15.74■□□□□ 0.11
LRRC28-214ENST00000559433 HDAC9Q9UKV0 1011 aa15.74■□□□□ 0.11
LRRC28-214ENST00000559433 TNNQ9UQP3 1299 aa15.74■□□□□ 0.11
LRRC28-214ENST00000559433 MYH13Q9UKX3 1938 aa15.74■□□□□ 0.11
LRRC28-214ENST00000559433 ECM29Q5VYK3 1845 aa15.73■□□□□ 0.11
LRRC28-214ENST00000559433 WDR33Q9C0J8 1336 aaKnown RBP15.73■□□□□ 0.11
LRRC28-214ENST00000559433 GYG1P46976 350 aa15.73■□□□□ 0.11
LRRC28-214ENST00000559433 RFX5P48382 616 aaPredicted RBP15.73■□□□□ 0.11
LRRC28-214ENST00000559433 MMP14P50281 582 aa15.73■□□□□ 0.11
LRRC28-214ENST00000559433 ANGEL2Q5VTE6 544 aaKnown RBP15.73■□□□□ 0.11
LRRC28-214ENST00000559433 CLUAP1Q96AJ1 413 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms