RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ZNF804AQ7Z570 1209 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 MICALL2Q8IY33 904 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 CNTROBQ8N137 903 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 AGBL3Q8NEM8 1001 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 FBXW7Q969H0 707 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 GPR101Q96P66 508 aaPredicted RBP5.46□□□□□ -1.54
SNX1-205ENST00000559339 MYO3BQ8WXR4 1341 aa5.46□□□□□ -1.54
SNX1-205ENST00000559339 TIAM2Q8IVF5 1701 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 DDX60Q8IY21 1712 aaKnown RBP5.45□□□□□ -1.54
SNX1-205ENST00000559339 WDR90Q96KV7 1748 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 CEP350Q5VT06 3117 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 TMEM88BA6NKF7 163 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 FRAT2O75474 233 aaPredicted RBP5.45□□□□□ -1.54
SNX1-205ENST00000559339 USP17L8P0C7I0 530 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 MKRN4PQ13434 485 aaPredicted RBP5.45□□□□□ -1.54
SNX1-205ENST00000559339 UBE4AQ14139 1066 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 METTL24Q5JXM2 366 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 RBM26Q5T8P6 1007 aaKnown RBP5.45□□□□□ -1.54
SNX1-205ENST00000559339 MAP1SQ66K74 1059 aaPredicted RBP5.45□□□□□ -1.54
SNX1-205ENST00000559339 TTLL5Q6EMB2 1281 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 RSBN1LQ6PCB5 846 aaPredicted RBP5.45□□□□□ -1.54
SNX1-205ENST00000559339 C15orf52Q6ZUT6 534 aaKnown RBP5.45□□□□□ -1.54
SNX1-205ENST00000559339 CDC37L1Q7L3B6 337 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 DZIP1LQ8IYY4 767 aaKnown RBP5.45□□□□□ -1.54
SNX1-205ENST00000559339 HELBQ8NG08 1087 aaPredicted RBP5.45□□□□□ -1.54
SNX1-205ENST00000559339 CLUAP1Q96AJ1 413 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 DCPSQ96C86 337 aaKnown RBP5.45□□□□□ -1.54
SNX1-205ENST00000559339 KAZALD1Q96I82 304 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 ZNF594Q96JF6 807 aaPredicted RBP5.45□□□□□ -1.54
SNX1-205ENST00000559339 CREBZFQ9NS37 354 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 FBXO3Q9UK99 471 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 HDAC9Q9UKV0 1011 aa5.45□□□□□ -1.54
SNX1-205ENST00000559339 DICER1Q9UPY3 1922 aaKnown RBP5.44□□□□□ -1.54
SNX1-205ENST00000559339 SRGAP3O43295 1099 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 MYO1BO43795 1136 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 SASH1O94885 1247 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 PDE8BO95263 885 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 ITGBL1O95965 494 aaPredicted RBP5.44□□□□□ -1.54
SNX1-205ENST00000559339 GNAI2P04899 355 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 IFIT1P09914 478 aaKnown RBP5.44□□□□□ -1.54
SNX1-205ENST00000559339 HIBADHP31937 336 aaKnown RBP5.44□□□□□ -1.54
SNX1-205ENST00000559339 GTF2IP78347 998 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 PUM3Q15397 648 aaKnown RBP5.44□□□□□ -1.54
SNX1-205ENST00000559339 KIF4BQ2VIQ3 1234 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 TBC1D10BQ4KMP7 808 aaPredicted RBP5.44□□□□□ -1.54
SNX1-205ENST00000559339 SAMD7Q7Z3H4 446 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 TXNRD3Q86VQ6 643 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 ITPRIPQ8IWB1 547 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 SULF1Q8IWU6 871 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 ANKRD44Q8N8A2 993 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 MEIS3Q99687 375 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 CHMP4BQ9H444 224 aaKnown RBP5.44□□□□□ -1.54
SNX1-205ENST00000559339 CD209Q9NNX6 404 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 MYOZ2Q9NPC6 264 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 KCNQ5Q9NR82 932 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 CEP126Q9P2H0 1117 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 ABT1Q9ULW3 272 aaKnown RBP5.44□□□□□ -1.54
SNX1-205ENST00000559339 RIPOR2Q9Y4F9 1068 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 LRRFIP2Q9Y608 721 aaKnown RBP5.44□□□□□ -1.54
SNX1-205ENST00000559339 LAMB2P55268 1798 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 SCN4AP35499 1836 aa5.44□□□□□ -1.54
SNX1-205ENST00000559339 COL4A5P29400 1685 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 CCDC88AQ3V6T2 1871 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 LRRC37AA6NMS7 1700 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 DUOX1Q9NRD9 1551 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 WTIPA6NIX2 430 aaPredicted RBP5.43□□□□□ -1.54
SNX1-205ENST00000559339 SPDYE4A6NLX3 237 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 SNAP23O00161 211 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 EYA2O00167 538 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 CIAO1O76071 339 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 SLC5A1P13866 664 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 IL1R1P14778 569 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 KLRK1P26718 216 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 IL15P40933 162 aaPredicted RBP5.43□□□□□ -1.54
SNX1-205ENST00000559339 ZNF280AP59817 542 aaPredicted RBP5.43□□□□□ -1.54
SNX1-205ENST00000559339 LRRC24Q50LG9 513 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 DACT2Q5SW24 774 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 KRT26Q7Z3Y9 468 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 TMEM57Q8N5G2 664 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.43□□□□□ -1.54
SNX1-205ENST00000559339 KLHDC4Q8TBB5 520 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 LPIN2Q92539 896 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 KLRG1Q96E93 195 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 PUS3Q9BZE2 481 aaKnown RBP5.43□□□□□ -1.54
SNX1-205ENST00000559339 SIL1Q9H173 461 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 ZNF408Q9H9D4 720 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 GNL3LQ9NVN8 582 aaKnown RBP5.43□□□□□ -1.54
SNX1-205ENST00000559339 PGAP2Q9UHJ9 254 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 RCAN3Q9UKA8 241 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 AKAP2Q9Y2D5 859 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 PASKQ96RG2 1323 aa5.43□□□□□ -1.54
SNX1-205ENST00000559339 CELF2O95319 508 aaKnown RBP5.42□□□□□ -1.54
SNX1-205ENST00000559339 GYG1P46976 350 aa5.42□□□□□ -1.54
SNX1-205ENST00000559339 RBM5P52756 815 aaKnown RBP eCLIP5.42□□□□□ -1.54
SNX1-205ENST00000559339 HIRAP54198 1017 aaPredicted RBP5.42□□□□□ -1.54
SNX1-205ENST00000559339 FKBP1AP62942 108 aaKnown RBP5.42□□□□□ -1.54
SNX1-205ENST00000559339 HTRA3P83110 453 aa5.42□□□□□ -1.54
SNX1-205ENST00000559339 PTPN12Q05209 780 aaKnown RBP5.42□□□□□ -1.54
SNX1-205ENST00000559339 G3BP1Q13283 466 aaKnown RBP eCLIP5.42□□□□□ -1.54
SNX1-205ENST00000559339 MTX1Q13505 466 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms