RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 CHGBP05060 677 aa17.97■□□□□ 0.47
AP4E1-202ENST00000558439 TPM1P09493 284 aa17.97■□□□□ 0.47
AP4E1-202ENST00000558439 KLHL10Q6JEL2 608 aa17.97■□□□□ 0.47
AP4E1-202ENST00000558439 ZMYND15Q9H091 742 aa17.97■□□□□ 0.47
AP4E1-202ENST00000558439 ADCY9O60503 1353 aa17.97■□□□□ 0.47
AP4E1-202ENST00000558439 MAP3K12Q12852 859 aa17.97■□□□□ 0.47
AP4E1-202ENST00000558439 TTC14Q96N46 770 aa17.97■□□□□ 0.47
AP4E1-202ENST00000558439 USP32Q8NFA0 1604 aa17.97■□□□□ 0.47
AP4E1-202ENST00000558439 PUS3Q9BZE2 481 aaKnown RBP17.97■□□□□ 0.47
AP4E1-202ENST00000558439 LMOD1P29536 600 aaPredicted RBP17.96■□□□□ 0.47
AP4E1-202ENST00000558439 FTOQ9C0B1 505 aaKnown RBP eCLIP17.96■□□□□ 0.47
AP4E1-202ENST00000558439 IL2RBP14784 551 aa17.96■□□□□ 0.47
AP4E1-202ENST00000558439 LRMPQ12912 555 aa17.96■□□□□ 0.47
AP4E1-202ENST00000558439 XAGE2Q96GT9 111 aa17.96■□□□□ 0.47
AP4E1-202ENST00000558439 TMX1Q9H3N1 280 aa17.96■□□□□ 0.47
AP4E1-202ENST00000558439 COPRSQ9NQ92 184 aa17.96■□□□□ 0.47
AP4E1-202ENST00000558439 SMTNL1A8MU46 457 aa17.96■□□□□ 0.47
AP4E1-202ENST00000558439 RAD21O60216 631 aa17.96■□□□□ 0.47
AP4E1-202ENST00000558439 IGHMBP2P38935 993 aaKnown RBP17.96■□□□□ 0.47
AP4E1-202ENST00000558439 CNNM3Q8NE01 707 aa17.96■□□□□ 0.47
AP4E1-202ENST00000558439 CLSTN2Q9H4D0 955 aa17.96■□□□□ 0.47
AP4E1-202ENST00000558439 SPTLC2O15270 562 aa17.95■□□□□ 0.46
AP4E1-202ENST00000558439 PTPN12Q05209 780 aaKnown RBP17.95■□□□□ 0.46
AP4E1-202ENST00000558439 ERBB3P21860 1342 aa17.95■□□□□ 0.46
AP4E1-202ENST00000558439 E7EWF7 191 aa17.95■□□□□ 0.46
AP4E1-202ENST00000558439 HELLSQ9NRZ9 838 aa17.95■□□□□ 0.46
AP4E1-202ENST00000558439 PCMTD1Q96MG8 357 aaPredicted RBP17.95■□□□□ 0.46
AP4E1-202ENST00000558439 ZFYP08048 801 aaPredicted RBP17.94■□□□□ 0.46
AP4E1-202ENST00000558439 BRMS1Q9HCU9 246 aa17.94■□□□□ 0.46
AP4E1-202ENST00000558439 ADAMTS2O95450 1211 aa17.94■□□□□ 0.46
AP4E1-202ENST00000558439 ZAP70P43403 619 aa17.94■□□□□ 0.46
AP4E1-202ENST00000558439 SLC4A8Q2Y0W8 1093 aa17.94■□□□□ 0.46
AP4E1-202ENST00000558439 USP28Q96RU2 1077 aa17.94■□□□□ 0.46
AP4E1-202ENST00000558439 RANBP6O60518 1105 aaKnown RBP17.94■□□□□ 0.46
AP4E1-202ENST00000558439 SYKP43405 635 aa17.94■□□□□ 0.46
AP4E1-202ENST00000558439 TSR1Q2NL82 804 aaKnown RBP17.94■□□□□ 0.46
AP4E1-202ENST00000558439 DNAJC10Q8IXB1 793 aa17.94■□□□□ 0.46
AP4E1-202ENST00000558439 MARCH6O60337 910 aa17.93■□□□□ 0.46
AP4E1-202ENST00000558439 SCRN1Q12765 414 aa17.93■□□□□ 0.46
AP4E1-202ENST00000558439 KIF18AQ8NI77 898 aa17.93■□□□□ 0.46
AP4E1-202ENST00000558439 PTPRUQ92729 1446 aa17.93■□□□□ 0.46
AP4E1-202ENST00000558439 ZBTB43O43298 467 aa17.93■□□□□ 0.46
AP4E1-202ENST00000558439 CEP135Q66GS9 1140 aa17.93■□□□□ 0.46
AP4E1-202ENST00000558439 PKNOX2Q96KN3 472 aa17.93■□□□□ 0.46
AP4E1-202ENST00000558439 HAUS7Q99871 368 aa17.93■□□□□ 0.46
AP4E1-202ENST00000558439 HSPD1P10809 573 aaKnown RBP17.93■□□□□ 0.46
AP4E1-202ENST00000558439 SSRP1Q08945 709 aaKnown RBP17.93■□□□□ 0.46
AP4E1-202ENST00000558439 MTX1Q13505 466 aa17.93■□□□□ 0.46
AP4E1-202ENST00000558439 CCDC191Q8NCU4 936 aa17.93■□□□□ 0.46
AP4E1-202ENST00000558439 ZKSCAN3Q9BRR0 538 aa17.93■□□□□ 0.46
AP4E1-202ENST00000558439 GNL3LQ9NVN8 582 aaKnown RBP17.92■□□□□ 0.46
AP4E1-202ENST00000558439 IRS4O14654 1257 aaPredicted RBP17.92■□□□□ 0.46
AP4E1-202ENST00000558439 CAVIN2O95810 425 aa17.92■□□□□ 0.46
AP4E1-202ENST00000558439 SLC5A1P13866 664 aa17.92■□□□□ 0.46
AP4E1-202ENST00000558439 ANKRD20A12PQ8NF67 263 aa17.92■□□□□ 0.46
AP4E1-202ENST00000558439 MYL10Q9BUA6 226 aa17.92■□□□□ 0.46
AP4E1-202ENST00000558439 CEP170BQ9Y4F5 1589 aaPredicted RBP17.92■□□□□ 0.46
AP4E1-202ENST00000558439 EXOC5O00471 708 aa17.92■□□□□ 0.46
AP4E1-202ENST00000558439 KCNG4Q8TDN1 519 aa17.92■□□□□ 0.46
AP4E1-202ENST00000558439 NRBP1Q9UHY1 535 aa17.92■□□□□ 0.46
AP4E1-202ENST00000558439 PYCARDQ9ULZ3 195 aa17.92■□□□□ 0.46
AP4E1-202ENST00000558439 TAF6LQ9Y6J9 622 aa17.92■□□□□ 0.46
AP4E1-202ENST00000558439 SIGLEC1Q9BZZ2 1709 aa17.92■□□□□ 0.46
AP4E1-202ENST00000558439 B4E1Z4 1266 aa17.91■□□□□ 0.46
AP4E1-202ENST00000558439 GPAA1O43292 621 aa17.91■□□□□ 0.46
AP4E1-202ENST00000558439 MIGA1Q8NAN2 632 aa17.91■□□□□ 0.46
AP4E1-202ENST00000558439 RIOK3O14730 519 aaKnown RBP17.91■□□□□ 0.46
AP4E1-202ENST00000558439 ZNF75DP51815 510 aa17.91■□□□□ 0.46
AP4E1-202ENST00000558439 FAM160A1Q05DH4 1040 aa17.91■□□□□ 0.46
AP4E1-202ENST00000558439 MFSD6Q6ZSS7 791 aa17.91■□□□□ 0.46
AP4E1-202ENST00000558439 PDLIM2Q96JY6 352 aa17.91■□□□□ 0.46
AP4E1-202ENST00000558439 MYO5BQ9ULV0 1848 aa17.91■□□□□ 0.46
AP4E1-202ENST00000558439 CPLX3Q8WVH0 158 aa17.91■□□□□ 0.46
AP4E1-202ENST00000558439 ACSBG1Q96GR2 724 aa17.91■□□□□ 0.46
AP4E1-202ENST00000558439 TOP1P11387 765 aaKnown RBP17.9■□□□□ 0.46
AP4E1-202ENST00000558439 ITGA6P23229 1130 aa17.9■□□□□ 0.46
AP4E1-202ENST00000558439 ADORA1P30542 326 aa17.9■□□□□ 0.46
AP4E1-202ENST00000558439 TTF1Q15361 905 aaPredicted RBP17.9■□□□□ 0.46
AP4E1-202ENST00000558439 NOL10Q9BSC4 688 aaKnown RBP17.9■□□□□ 0.46
AP4E1-202ENST00000558439 IFNKQ9P0W0 207 aa17.9■□□□□ 0.46
AP4E1-202ENST00000558439 PI16Q6UXB8 463 aa17.9■□□□□ 0.46
AP4E1-202ENST00000558439 TEX13AQ9BXU3 409 aaPredicted RBP17.9■□□□□ 0.46
AP4E1-202ENST00000558439 IGSF3O75054 1194 aa17.9■□□□□ 0.46
AP4E1-202ENST00000558439 URI1O94763 535 aaPredicted RBP17.9■□□□□ 0.46
AP4E1-202ENST00000558439 PHKBQ93100 1093 aa17.9■□□□□ 0.46
AP4E1-202ENST00000558439 GPHNQ9NQX3 736 aaPredicted RBP17.9■□□□□ 0.46
AP4E1-202ENST00000558439 CYP27B1O15528 508 aa17.89■□□□□ 0.45
AP4E1-202ENST00000558439 CBFA2T2O43439 604 aa17.89■□□□□ 0.45
AP4E1-202ENST00000558439 MRVI1Q9Y6F6 885 aa17.89■□□□□ 0.45
AP4E1-202ENST00000558439 PCDH11XQ9BZA7 1347 aa17.89■□□□□ 0.45
AP4E1-202ENST00000558439 PCDH11YQ9BZA8 1340 aa17.89■□□□□ 0.45
AP4E1-202ENST00000558439 ARGLU1Q9NWB6 273 aaPredicted RBP17.89■□□□□ 0.45
AP4E1-202ENST00000558439 TOB2Q14106 344 aaPredicted RBP17.89■□□□□ 0.45
AP4E1-202ENST00000558439 CCDC102BQ68D86 513 aa17.89■□□□□ 0.45
AP4E1-202ENST00000558439 AMOTL1Q8IY63 956 aa17.89■□□□□ 0.45
AP4E1-202ENST00000558439 WASF1Q92558 559 aa17.89■□□□□ 0.45
AP4E1-202ENST00000558439 NRKQ7Z2Y5 1582 aa17.89■□□□□ 0.45
AP4E1-202ENST00000558439 SALL3Q9BXA9 1300 aa17.88■□□□□ 0.45
AP4E1-202ENST00000558439 MAGEB6Q8N7X4 407 aa17.88■□□□□ 0.45
AP4E1-202ENST00000558439 LLPHQ9BRT6 129 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms