RNA–Protein interactions for RNA: ENST00000558431.1

SEMA6D-209, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-209ENST00000558431 ZNF541Q9H0D2 1346 aa12.54□□□□□ -0.4
SEMA6D-209ENST00000558431 IQCA1LA6NCM1 817 aa12.53□□□□□ -0.4
SEMA6D-209ENST00000558431 GRIPAP1Q4V328 841 aa12.53□□□□□ -0.4
SEMA6D-209ENST00000558431 RIC3Q7Z5B4 369 aa12.53□□□□□ -0.4
SEMA6D-209ENST00000558431 LARGE2Q8N3Y3 721 aa12.53□□□□□ -0.4
SEMA6D-209ENST00000558431 PSMD1Q99460 953 aa12.53□□□□□ -0.4
SEMA6D-209ENST00000558431 KIAA1468Q9P260 1216 aa12.53□□□□□ -0.4
SEMA6D-209ENST00000558431 ABCC4O15439 1325 aa12.53□□□□□ -0.4
SEMA6D-209ENST00000558431 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.41
SEMA6D-209ENST00000558431 RTL5Q5HYW3 569 aaPredicted RBP12.52□□□□□ -0.41
SEMA6D-209ENST00000558431 DDX46Q7L014 1031 aaKnown RBP12.52□□□□□ -0.41
SEMA6D-209ENST00000558431 SLC51AQ86UW1 340 aa12.52□□□□□ -0.41
SEMA6D-209ENST00000558431 DNAJC5GQ8N7S2 189 aa12.52□□□□□ -0.41
SEMA6D-209ENST00000558431 RABGEF1Q9UJ41 708 aa12.52□□□□□ -0.41
SEMA6D-209ENST00000558431 GJA3Q9Y6H8 435 aa12.52□□□□□ -0.41
SEMA6D-209ENST00000558431 EAPPQ56P03 285 aaPredicted RBP12.51□□□□□ -0.41
SEMA6D-209ENST00000558431 C8orf58Q8NAV2 365 aa12.51□□□□□ -0.41
SEMA6D-209ENST00000558431 FAM89AQ96GI7 184 aa12.51□□□□□ -0.41
SEMA6D-209ENST00000558431 ISCA1Q9BUE6 129 aa12.51□□□□□ -0.41
SEMA6D-209ENST00000558431 PHAXQ9H814 394 aaKnown RBP12.51□□□□□ -0.41
SEMA6D-209ENST00000558431 ATP6V0A2Q9Y487 856 aa12.51□□□□□ -0.41
SEMA6D-209ENST00000558431 GTF3C3Q9Y5Q9 886 aa12.51□□□□□ -0.41
SEMA6D-209ENST00000558431 SNED1Q8TER0 1413 aa12.51□□□□□ -0.41
SEMA6D-209ENST00000558431 CACNA1FO60840 1977 aa12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 TRIM6-TRIM34B2RNG4 842 aa12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 BHMG1C9JSJ3 638 aaPredicted RBP12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 FZD9O00144 591 aa12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 PPIP5K2O43314 1243 aa12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 BBOX1O75936 387 aa12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 CCDC30Q5VVM6 783 aa12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 NIM1KQ8IY84 436 aa12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 TSR2Q969E8 191 aaKnown RBP12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 KLRG1Q96E93 195 aa12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 CHMP4AQ9BY43 222 aa12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 TAF1DQ9H5J8 278 aaPredicted RBP12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 CDHR5Q9HBB8 845 aa12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 HACL1Q9UJ83 578 aa12.5□□□□□ -0.41
SEMA6D-209ENST00000558431 COL4A5P29400 1685 aa12.49□□□□□ -0.41
SEMA6D-209ENST00000558431 GRAPQ13588 217 aa12.49□□□□□ -0.41
SEMA6D-209ENST00000558431 DPP8Q6V1X1 898 aaPredicted RBP12.49□□□□□ -0.41
SEMA6D-209ENST00000558431 LDHDQ86WU2 507 aa12.49□□□□□ -0.41
SEMA6D-209ENST00000558431 GPC2Q8N158 579 aa12.49□□□□□ -0.41
SEMA6D-209ENST00000558431 SUPT20HQ8NEM7 779 aa12.49□□□□□ -0.41
SEMA6D-209ENST00000558431 GRAPLQ8TC17 118 aaPredicted RBP12.49□□□□□ -0.41
SEMA6D-209ENST00000558431 MYD88Q99836 296 aa12.49□□□□□ -0.41
SEMA6D-209ENST00000558431 SALL2Q9Y467 1007 aaPredicted RBP12.49□□□□□ -0.41
SEMA6D-209ENST00000558431 DDX58O95786 925 aaKnown RBP12.48□□□□□ -0.41
SEMA6D-209ENST00000558431 LMOD1P29536 600 aaPredicted RBP12.48□□□□□ -0.41
SEMA6D-209ENST00000558431 EPHX2P34913 555 aa12.48□□□□□ -0.41
SEMA6D-209ENST00000558431 AOC3Q16853 763 aa12.48□□□□□ -0.41
SEMA6D-209ENST00000558431 PACS2Q86VP3 889 aa12.48□□□□□ -0.41
SEMA6D-209ENST00000558431 WWC1Q8IX03 1113 aa12.48□□□□□ -0.41
SEMA6D-209ENST00000558431 SP8Q8IXZ3 490 aa12.48□□□□□ -0.41
SEMA6D-209ENST00000558431 MPNDQ8N594 471 aa12.48□□□□□ -0.41
SEMA6D-209ENST00000558431 TSPYL6Q8N831 410 aa12.48□□□□□ -0.41
SEMA6D-209ENST00000558431 STK31Q9BXU1 1019 aa12.48□□□□□ -0.41
SEMA6D-209ENST00000558431 MYH3P11055 1940 aa12.48□□□□□ -0.41
SEMA6D-209ENST00000558431 IRS4O14654 1257 aaPredicted RBP12.47□□□□□ -0.41
SEMA6D-209ENST00000558431 TRIM28Q13263 835 aaKnown RBP12.47□□□□□ -0.41
SEMA6D-209ENST00000558431 CCDC27Q2M243 656 aa12.47□□□□□ -0.41
SEMA6D-209ENST00000558431 CDCA7LQ96GN5 454 aa12.47□□□□□ -0.41
SEMA6D-209ENST00000558431 LRRC37AA6NMS7 1700 aa12.46□□□□□ -0.41
SEMA6D-209ENST00000558431 PRSS12P56730 875 aa12.46□□□□□ -0.41
SEMA6D-209ENST00000558431 SMYD5Q6GMV2 418 aa12.46□□□□□ -0.41
SEMA6D-209ENST00000558431 TMC4Q7Z404 712 aa12.46□□□□□ -0.41
SEMA6D-209ENST00000558431 PNMA8AQ86V59 439 aaPredicted RBP12.46□□□□□ -0.41
SEMA6D-209ENST00000558431 WNT2BQ93097 391 aa12.46□□□□□ -0.41
SEMA6D-209ENST00000558431 SEPT9Q9UHD8 586 aaPredicted RBP12.46□□□□□ -0.41
SEMA6D-209ENST00000558431 HSP90B1P14625 803 aaKnown RBP12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 SF3B3Q15393 1217 aaKnown RBP12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 TWISTNBQ3B726 338 aaPredicted RBP12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 ZBTB38Q8NAP3 1195 aaPredicted RBP12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 JARID2Q92833 1246 aaPredicted RBP12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 CELF1Q92879 486 aaKnown RBP12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 METTL22Q9BUU2 404 aaPredicted RBP12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 RTFDC1Q9BY42 306 aaPredicted RBP12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 VPS33BQ9H267 617 aa12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 CWC25Q9NXE8 425 aaPredicted RBP12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 ZNRF3Q9ULT6 936 aa12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 MAP3K2Q9Y2U5 619 aa12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 SPEF2Q9C093 1822 aa12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 LTBP1Q14766 1721 aa12.45□□□□□ -0.42
SEMA6D-209ENST00000558431 ADAMTSL1Q8N6G6 1762 aa12.44□□□□□ -0.42
SEMA6D-209ENST00000558431 NEFLP07196 543 aa12.44□□□□□ -0.42
SEMA6D-209ENST00000558431 PTPN5P54829 565 aa12.44□□□□□ -0.42
SEMA6D-209ENST00000558431 MAP1SQ66K74 1059 aaPredicted RBP12.44□□□□□ -0.42
SEMA6D-209ENST00000558431 CCDC191Q8NCU4 936 aa12.44□□□□□ -0.42
SEMA6D-209ENST00000558431 HCSTQ9UBK5 93 aa12.44□□□□□ -0.42
SEMA6D-209ENST00000558431 TSKSQ9UJT2 592 aa12.44□□□□□ -0.42
SEMA6D-209ENST00000558431 NSFL1CQ9UNZ2 370 aaKnown RBP12.44□□□□□ -0.42
SEMA6D-209ENST00000558431 TRPM7Q96QT4 1865 aa12.44□□□□□ -0.42
SEMA6D-209ENST00000558431 IL16Q14005 1332 aa12.43□□□□□ -0.42
SEMA6D-209ENST00000558431 PI4KAP2A4QPH2 592 aa12.43□□□□□ -0.42
SEMA6D-209ENST00000558431 C6orf229H3BNL8 230 aa12.43□□□□□ -0.42
SEMA6D-209ENST00000558431 PCCAP05165 728 aaPredicted RBP12.43□□□□□ -0.42
SEMA6D-209ENST00000558431 EPS15P42566 896 aa12.43□□□□□ -0.42
SEMA6D-209ENST00000558431 RPS8P62241 208 aaKnown RBP12.43□□□□□ -0.42
SEMA6D-209ENST00000558431 CXCL9Q07325 125 aa12.43□□□□□ -0.42
SEMA6D-209ENST00000558431 KIAA2012Q0VF49 1180 aa12.43□□□□□ -0.42
SEMA6D-209ENST00000558431 NEXNQ0ZGT2 675 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms