RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 GDF6Q6KF10 455 aaPredicted RBP6.37□□□□□ -1.39
LRRC28-205ENST00000558248 XKR5Q6UX68 686 aa6.37□□□□□ -1.39
LRRC28-205ENST00000558248 CD163Q86VB7 1156 aa6.37□□□□□ -1.39
LRRC28-205ENST00000558248 MUC3BQ9H195 1237 aa6.37□□□□□ -1.39
LRRC28-205ENST00000558248 TMEM63CQ9P1W3 806 aa6.37□□□□□ -1.39
LRRC28-205ENST00000558248 POLIQ9UNA4 740 aa6.37□□□□□ -1.39
LRRC28-205ENST00000558248 C9orf172C9J069 976 aa6.36□□□□□ -1.39
LRRC28-205ENST00000558248 CHRNA4P43681 627 aa6.36□□□□□ -1.39
LRRC28-205ENST00000558248 NRG1Q02297 640 aaPredicted RBP6.36□□□□□ -1.39
LRRC28-205ENST00000558248 FMR1NBQ8N0W7 255 aaPredicted RBP6.36□□□□□ -1.39
LRRC28-205ENST00000558248 BRPF3Q9ULD4 1205 aa6.36□□□□□ -1.39
LRRC28-205ENST00000558248 IFT140Q96RY7 1462 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 NDUFB5O43674 189 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 PHACTR2O75167 634 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 KIF4AO95239 1232 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 PROCP04070 461 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 GATA4P43694 442 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 SERPINB4P48594 390 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 GRIK4Q16099 956 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 GRIK5Q16478 980 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 MAP4K3Q8IVH8 894 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 IL22RA1Q8N6P7 574 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 RGS22Q8NE09 1264 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 SNX29Q8TEQ0 813 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 SRA1Q9HD15 236 aaKnown RBP6.35□□□□□ -1.39
LRRC28-205ENST00000558248 USP21Q9UK80 565 aa6.35□□□□□ -1.39
LRRC28-205ENST00000558248 CFTRP13569 1480 aa6.34□□□□□ -1.39
LRRC28-205ENST00000558248 CHD1O14646 1710 aa6.34□□□□□ -1.39
LRRC28-205ENST00000558248 ITGB2P05107 769 aa6.34□□□□□ -1.39
LRRC28-205ENST00000558248 SUZ12Q15022 739 aaKnown RBP6.34□□□□□ -1.39
LRRC28-205ENST00000558248 CEP135Q66GS9 1140 aa6.34□□□□□ -1.39
LRRC28-205ENST00000558248 GGNBP2Q9H3C7 697 aa6.34□□□□□ -1.39
LRRC28-205ENST00000558248 KANSL3Q9P2N6 904 aa6.34□□□□□ -1.39
LRRC28-205ENST00000558248 A6NHS1 94 aa6.33□□□□□ -1.4
LRRC28-205ENST00000558248 FZD6O60353 706 aa6.33□□□□□ -1.4
LRRC28-205ENST00000558248 BRD1O95696 1058 aa6.33□□□□□ -1.4
LRRC28-205ENST00000558248 CYP2E1P05181 493 aaPredicted RBP6.33□□□□□ -1.4
LRRC28-205ENST00000558248 EDN3P14138 238 aa6.33□□□□□ -1.4
LRRC28-205ENST00000558248 BAG6P46379 1132 aa6.33□□□□□ -1.4
LRRC28-205ENST00000558248 ATP11AP98196 1134 aa6.33□□□□□ -1.4
LRRC28-205ENST00000558248 PDE3BQ13370 1112 aa6.33□□□□□ -1.4
LRRC28-205ENST00000558248 COL13A1Q5TAT6 717 aaPredicted RBP6.33□□□□□ -1.4
LRRC28-205ENST00000558248 FAM117BQ6P1L5 589 aa6.33□□□□□ -1.4
LRRC28-205ENST00000558248 FBXO11Q86XK2 927 aa6.33□□□□□ -1.4
LRRC28-205ENST00000558248 PBX4Q9BYU1 374 aa6.33□□□□□ -1.4
LRRC28-205ENST00000558248 TRIM33Q9UPN9 1127 aa6.33□□□□□ -1.4
LRRC28-205ENST00000558248 PPME1Q9Y570 386 aa6.33□□□□□ -1.4
LRRC28-205ENST00000558248 AQRO60306 1485 aaKnown RBP eCLIP6.33□□□□□ -1.4
LRRC28-205ENST00000558248 TNFRSF21O75509 655 aa6.32□□□□□ -1.4
LRRC28-205ENST00000558248 NEFLP07196 543 aa6.32□□□□□ -1.4
LRRC28-205ENST00000558248 PTPRAP18433 802 aa6.32□□□□□ -1.4
LRRC28-205ENST00000558248 TXNDC2Q86VQ3 553 aa6.32□□□□□ -1.4
LRRC28-205ENST00000558248 AEBP1Q8IUX7 1158 aa6.32□□□□□ -1.4
LRRC28-205ENST00000558248 GJD3Q8N144 294 aa6.32□□□□□ -1.4
LRRC28-205ENST00000558248 C1orf127Q8N9H9 656 aa6.32□□□□□ -1.4
LRRC28-205ENST00000558248 LENG1Q96BZ8 264 aaPredicted RBP6.32□□□□□ -1.4
LRRC28-205ENST00000558248 LACRTQ9GZZ8 138 aa6.32□□□□□ -1.4
LRRC28-205ENST00000558248 RASSF4Q9H2L5 321 aa6.32□□□□□ -1.4
LRRC28-205ENST00000558248 CCDC87Q9NVE4 849 aa6.32□□□□□ -1.4
LRRC28-205ENST00000558248 CNTN3Q9P232 1028 aa6.32□□□□□ -1.4
LRRC28-205ENST00000558248 CDC27P30260 824 aa6.31□□□□□ -1.4
LRRC28-205ENST00000558248 MFAP1P55081 439 aaKnown RBP6.31□□□□□ -1.4
LRRC28-205ENST00000558248 CABP4P57796 275 aa6.31□□□□□ -1.4
LRRC28-205ENST00000558248 IGF2-ASQ6U949 168 aa6.31□□□□□ -1.4
LRRC28-205ENST00000558248 CEP120Q8N960 986 aa6.31□□□□□ -1.4
LRRC28-205ENST00000558248 TMC1Q8TDI8 760 aa6.31□□□□□ -1.4
LRRC28-205ENST00000558248 AMOTL2Q9Y2J4 779 aa6.31□□□□□ -1.4
LRRC28-205ENST00000558248 SELPP16109 830 aa6.3□□□□□ -1.4
LRRC28-205ENST00000558248 RBM25P49756 843 aaKnown RBP6.3□□□□□ -1.4
LRRC28-205ENST00000558248 TXNRD3Q86VQ6 643 aa6.3□□□□□ -1.4
LRRC28-205ENST00000558248 CITED4Q96RK1 184 aa6.3□□□□□ -1.4
LRRC28-205ENST00000558248 SALL4Q9UJQ4 1053 aa6.3□□□□□ -1.4
LRRC28-205ENST00000558248 EIF4G3O43432 1585 aaKnown RBP6.3□□□□□ -1.4
LRRC28-205ENST00000558248 PDE2AO00408 941 aaPredicted RBP6.29□□□□□ -1.4
LRRC28-205ENST00000558248 ADGRE1Q14246 886 aa6.29□□□□□ -1.4
LRRC28-205ENST00000558248 MBTPS1Q14703 1052 aa6.29□□□□□ -1.4
LRRC28-205ENST00000558248 SHISA2Q6UWI4 295 aa6.29□□□□□ -1.4
LRRC28-205ENST00000558248 PUS7Q96PZ0 661 aaKnown RBP6.29□□□□□ -1.4
LRRC28-205ENST00000558248 CHRDQ9H2X0 955 aa6.29□□□□□ -1.4
LRRC28-205ENST00000558248 BIN2Q9UBW5 565 aaPredicted RBP6.29□□□□□ -1.4
LRRC28-205ENST00000558248 FOXD3Q9UJU5 478 aaPredicted RBP6.29□□□□□ -1.4
LRRC28-205ENST00000558248 PATL2C9JE40 543 aaKnown RBP6.28□□□□□ -1.4
LRRC28-205ENST00000558248 K7ELQ4 463 aaPredicted RBP6.28□□□□□ -1.4
LRRC28-205ENST00000558248 EREGO14944 169 aa6.28□□□□□ -1.4
LRRC28-205ENST00000558248 DEAF1O75398 565 aaPredicted RBP6.28□□□□□ -1.4
LRRC28-205ENST00000558248 ARHGAP4P98171 946 aa6.28□□□□□ -1.4
LRRC28-205ENST00000558248 ILDR2Q71H61 639 aa6.28□□□□□ -1.4
LRRC28-205ENST00000558248 OSMRQ99650 979 aa6.28□□□□□ -1.4
LRRC28-205ENST00000558248 MRPL18Q9H0U6 180 aaKnown RBP6.28□□□□□ -1.4
LRRC28-205ENST00000558248 DZANK1Q9NVP4 752 aa6.28□□□□□ -1.4
LRRC28-205ENST00000558248 GNEQ9Y223 722 aaKnown RBP6.28□□□□□ -1.4
LRRC28-205ENST00000558248 WIZO95785 1651 aa6.27□□□□□ -1.41
LRRC28-205ENST00000558248 TOPBP1Q92547 1522 aa6.27□□□□□ -1.41
LRRC28-205ENST00000558248 SOWAHDA6NJG2 315 aa6.27□□□□□ -1.41
LRRC28-205ENST00000558248 LINC01387J3KSC0 135 aa6.27□□□□□ -1.41
LRRC28-205ENST00000558248 DLL1O00548 723 aa6.27□□□□□ -1.41
LRRC28-205ENST00000558248 FURINP09958 794 aa6.27□□□□□ -1.41
LRRC28-205ENST00000558248 CDC25BP30305 580 aa6.27□□□□□ -1.41
LRRC28-205ENST00000558248 DOC2BQ14184 412 aa6.27□□□□□ -1.41
LRRC28-205ENST00000558248 TMEM102Q8N9M5 508 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms