RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 ARID4AP29374 1257 aaPredicted RBP24.64■■□□□ 1.53
SNRPA1-205ENST00000558036 ILDR1Q86SU0 546 aaPredicted RBP24.64■■□□□ 1.53
SNRPA1-205ENST00000558036 ZNF512BQ96KM6 892 aaPredicted RBP24.64■■□□□ 1.53
SNRPA1-205ENST00000558036 PDGFDQ9GZP0 370 aaPredicted RBP24.64■■□□□ 1.53
SNRPA1-205ENST00000558036 RAD50Q92878 1312 aa24.64■■□□□ 1.53
SNRPA1-205ENST00000558036 GYG1P46976 350 aa24.62■■□□□ 1.53
SNRPA1-205ENST00000558036 RASGRF1Q13972 1273 aa24.62■■□□□ 1.53
SNRPA1-205ENST00000558036 CCDC129Q6ZRS4 1044 aa24.62■■□□□ 1.53
SNRPA1-205ENST00000558036 CYP2E1P05181 493 aaPredicted RBP24.62■■□□□ 1.53
SNRPA1-205ENST00000558036 KLRK1P26718 216 aa24.62■■□□□ 1.53
SNRPA1-205ENST00000558036 BECN1Q14457 450 aa24.62■■□□□ 1.53
SNRPA1-205ENST00000558036 HMG20BQ9P0W2 317 aa24.62■■□□□ 1.53
SNRPA1-205ENST00000558036 IQSEC3Q9UPP2 1182 aaPredicted RBP24.62■■□□□ 1.53
SNRPA1-205ENST00000558036 PARP3Q9Y6F1 533 aa24.62■■□□□ 1.53
SNRPA1-205ENST00000558036 ARAP2Q8WZ64 1704 aa24.62■■□□□ 1.53
SNRPA1-205ENST00000558036 CD2BP2O95400 341 aaKnown RBP24.61■■□□□ 1.53
SNRPA1-205ENST00000558036 UBE4AQ14139 1066 aa24.61■■□□□ 1.53
SNRPA1-205ENST00000558036 RFX7Q2KHR2 1363 aa24.61■■□□□ 1.53
SNRPA1-205ENST00000558036 MED23Q9ULK4 1368 aa24.61■■□□□ 1.53
SNRPA1-205ENST00000558036 UQCRFS1P1P0C7P4 283 aa24.61■■□□□ 1.53
SNRPA1-205ENST00000558036 MCCP23508 829 aa24.61■■□□□ 1.53
SNRPA1-205ENST00000558036 KCNJ4P48050 445 aa24.6■■□□□ 1.53
SNRPA1-205ENST00000558036 SPATA5Q8NB90 893 aa24.6■■□□□ 1.53
SNRPA1-205ENST00000558036 CCDC171Q6TFL3 1326 aa24.6■■□□□ 1.53
SNRPA1-205ENST00000558036 HSPA4P34932 840 aa24.59■■□□□ 1.53
SNRPA1-205ENST00000558036 PIH1D3Q9NQM4 214 aaKnown RBP24.59■■□□□ 1.53
SNRPA1-205ENST00000558036 A0A1B0GUL6 1792 aa24.59■■□□□ 1.53
SNRPA1-205ENST00000558036 RBM17Q96I25 401 aaKnown RBP24.59■■□□□ 1.53
SNRPA1-205ENST00000558036 RNF113AO15541 343 aaKnown RBP24.58■■□□□ 1.53
SNRPA1-205ENST00000558036 BRIP1Q9BX63 1249 aa24.58■■□□□ 1.53
SNRPA1-205ENST00000558036 ANKRD2Q9GZV1 360 aa24.58■■□□□ 1.53
SNRPA1-205ENST00000558036 ANKIB1Q9P2G1 1089 aa24.58■■□□□ 1.53
SNRPA1-205ENST00000558036 KLRG2A4D1S0 409 aaPredicted RBP24.58■■□□□ 1.52
SNRPA1-205ENST00000558036 MCMDC2Q4G0Z9 681 aa24.58■■□□□ 1.52
SNRPA1-205ENST00000558036 AKAP11Q9UKA4 1901 aa24.58■■□□□ 1.52
SNRPA1-205ENST00000558036 RABEP1Q15276 862 aa24.57■■□□□ 1.52
SNRPA1-205ENST00000558036 ZMYM1Q5SVZ6 1142 aa24.56■■□□□ 1.52
SNRPA1-205ENST00000558036 FAM84BQ96KN1 310 aaPredicted RBP24.56■■□□□ 1.52
SNRPA1-205ENST00000558036 ZNF804BA4D1E1 1349 aa24.56■■□□□ 1.52
SNRPA1-205ENST00000558036 EPB41L2O43491 1005 aaKnown RBP24.56■■□□□ 1.52
SNRPA1-205ENST00000558036 IDH1O75874 414 aaKnown RBP24.56■■□□□ 1.52
SNRPA1-205ENST00000558036 HOXA10P31260 410 aaPredicted RBP24.56■■□□□ 1.52
SNRPA1-205ENST00000558036 RASEFQ8IZ41 740 aa24.56■■□□□ 1.52
SNRPA1-205ENST00000558036 PRPF40BQ6NWY9 871 aaKnown RBP24.55■■□□□ 1.52
SNRPA1-205ENST00000558036 TXNRD3Q86VQ6 643 aa24.55■■□□□ 1.52
SNRPA1-205ENST00000558036 VPS37DQ86XT2 251 aa24.55■■□□□ 1.52
SNRPA1-205ENST00000558036 SPRYD3Q8NCJ5 442 aa24.55■■□□□ 1.52
SNRPA1-205ENST00000558036 MAP4K1Q92918 833 aa24.55■■□□□ 1.52
SNRPA1-205ENST00000558036 NRXN2Q9P2S2 1712 aa24.55■■□□□ 1.52
SNRPA1-205ENST00000558036 CAVIN4Q5BKX8 364 aa24.55■■□□□ 1.52
SNRPA1-205ENST00000558036 HSCBQ8IWL3 235 aa24.55■■□□□ 1.52
SNRPA1-205ENST00000558036 OSBP2Q969R2 916 aa24.55■■□□□ 1.52
SNRPA1-205ENST00000558036 RBM8AQ9Y5S9 174 aaKnown RBP24.55■■□□□ 1.52
SNRPA1-205ENST00000558036 MAST3O60307 1309 aa24.54■■□□□ 1.52
SNRPA1-205ENST00000558036 ANKRD31Q8N7Z5 1873 aa24.54■■□□□ 1.52
SNRPA1-205ENST00000558036 M0R2C6 588 aa24.54■■□□□ 1.52
SNRPA1-205ENST00000558036 WASHC4Q2M389 1173 aa24.54■■□□□ 1.52
SNRPA1-205ENST00000558036 SRGNP10124 158 aa24.53■■□□□ 1.52
SNRPA1-205ENST00000558036 TTF1Q15361 905 aaPredicted RBP24.53■■□□□ 1.52
SNRPA1-205ENST00000558036 SNX21Q969T3 373 aa24.53■■□□□ 1.52
SNRPA1-205ENST00000558036 GPR101Q96P66 508 aaPredicted RBP24.53■■□□□ 1.52
SNRPA1-205ENST00000558036 HELLSQ9NRZ9 838 aa24.53■■□□□ 1.52
SNRPA1-205ENST00000558036 SNX14Q9Y5W7 946 aa24.53■■□□□ 1.52
SNRPA1-205ENST00000558036 ANAPC15P60006 121 aa24.53■■□□□ 1.52
SNRPA1-205ENST00000558036 GPSM2P81274 684 aa24.53■■□□□ 1.52
SNRPA1-205ENST00000558036 SLC9C2Q5TAH2 1124 aa24.53■■□□□ 1.52
SNRPA1-205ENST00000558036 VPS53Q5VIR6 699 aa24.53■■□□□ 1.52
SNRPA1-205ENST00000558036 CRAMP1Q96RY5 1269 aa24.52■■□□□ 1.52
SNRPA1-205ENST00000558036 WWC3Q9ULE0 1092 aa24.52■■□□□ 1.52
SNRPA1-205ENST00000558036 NSFL1CQ9UNZ2 370 aaKnown RBP24.52■■□□□ 1.52
SNRPA1-205ENST00000558036 NECTIN1Q15223 517 aa24.52■■□□□ 1.52
SNRPA1-205ENST00000558036 UPF3BQ9BZI7 483 aaKnown RBP24.52■■□□□ 1.52
SNRPA1-205ENST00000558036 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.52■■□□□ 1.52
SNRPA1-205ENST00000558036 PUS7LQ9H0K6 701 aaKnown RBP24.52■■□□□ 1.52
SNRPA1-205ENST00000558036 XDHP47989 1333 aa24.51■■□□□ 1.51
SNRPA1-205ENST00000558036 COL1A1P02452 1464 aaPredicted RBP24.51■■□□□ 1.51
SNRPA1-205ENST00000558036 BBOX1O75936 387 aa24.51■■□□□ 1.51
SNRPA1-205ENST00000558036 ZFYP08048 801 aaPredicted RBP24.51■■□□□ 1.51
SNRPA1-205ENST00000558036 LRRFIP1Q32MZ4 808 aaKnown RBP24.51■■□□□ 1.51
SNRPA1-205ENST00000558036 ERICH6Q7L0X2 663 aa24.51■■□□□ 1.51
SNRPA1-205ENST00000558036 FBXO33Q7Z6M2 555 aa24.51■■□□□ 1.51
SNRPA1-205ENST00000558036 GNL3LQ9NVN8 582 aaKnown RBP24.51■■□□□ 1.51
SNRPA1-205ENST00000558036 PDE6BP35913 854 aa24.5■■□□□ 1.51
SNRPA1-205ENST00000558036 NEK4P51957 841 aa24.5■■□□□ 1.51
SNRPA1-205ENST00000558036 TICAM2Q86XR7 235 aa24.5■■□□□ 1.51
SNRPA1-205ENST00000558036 ADD2P35612 726 aa24.5■■□□□ 1.51
SNRPA1-205ENST00000558036 CREB3L3Q68CJ9 461 aa24.5■■□□□ 1.51
SNRPA1-205ENST00000558036 HIBADHP31937 336 aaKnown RBP24.49■■□□□ 1.51
SNRPA1-205ENST00000558036 TAF6LQ9Y6J9 622 aa24.49■■□□□ 1.51
SNRPA1-205ENST00000558036 IRS2Q9Y4H2 1338 aa24.49■■□□□ 1.51
SNRPA1-205ENST00000558036 PPEF1O14829 653 aaPredicted RBP24.49■■□□□ 1.51
SNRPA1-205ENST00000558036 FRAT2O75474 233 aaPredicted RBP24.49■■□□□ 1.51
SNRPA1-205ENST00000558036 NPR1P16066 1061 aa24.49■■□□□ 1.51
SNRPA1-205ENST00000558036 PDE6AP16499 860 aa24.49■■□□□ 1.51
SNRPA1-205ENST00000558036 OLFM4Q6UX06 510 aa24.49■■□□□ 1.51
SNRPA1-205ENST00000558036 APPBP2Q92624 585 aa24.49■■□□□ 1.51
SNRPA1-205ENST00000558036 SLC27A2O14975 620 aa24.48■■□□□ 1.51
SNRPA1-205ENST00000558036 SLKQ9H2G2 1235 aaPredicted RBP24.48■■□□□ 1.51
SNRPA1-205ENST00000558036 ZNF532Q9HCE3 1301 aa24.48■■□□□ 1.51
SNRPA1-205ENST00000558036 LEMD3Q9Y2U8 911 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms