RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ANGPTL3Q9Y5C1 460 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 FSIP1Q8NA03 581 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 TRIM4Q9C037 500 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 COPG1Q9Y678 874 aaKnown RBP9.93□□□□□ -0.82
SYNE3-205ENST00000557275 HIP1RO75146 1068 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 ZNF131P52739 623 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 MUM1Q2TAK8 710 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 DUSP27Q5VZP5 1158 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 NONOQ15233 471 aaKnown RBP eCLIP9.93□□□□□ -0.82
SYNE3-205ENST00000557275 MMRN2Q9H8L6 949 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 VPS18Q9P253 973 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 XPCQ01831 940 aaPredicted RBP9.93□□□□□ -0.82
SYNE3-205ENST00000557275 NUTM2FA1L443 756 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 XAB2Q9HCS7 855 aaKnown RBP9.93□□□□□ -0.82
SYNE3-205ENST00000557275 SRGAP3O43295 1099 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 MAN1A2O60476 641 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 P3H4Q92791 437 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 CCDC42Q96M95 316 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 TMOD4Q9NZQ9 345 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 BAG5Q9UL15 447 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 FAF1Q9UNN5 650 aaPredicted RBP9.93□□□□□ -0.82
SYNE3-205ENST00000557275 ABCC11Q96J66 1382 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 ATP2C2O75185 946 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 KIF11P52732 1056 aa9.93□□□□□ -0.82
SYNE3-205ENST00000557275 DACT3Q96B18 629 aaPredicted RBP9.93□□□□□ -0.82
SYNE3-205ENST00000557275 PPP4R1Q8TF05 950 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 PFDN1O60925 122 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 HAUS7Q99871 368 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 FAM8A1Q9UBU6 413 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 STK24Q9Y6E0 443 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.92□□□□□ -0.82
SYNE3-205ENST00000557275 ESRRGP62508 458 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 NKTRP30414 1462 aaKnown RBP9.92□□□□□ -0.82
SYNE3-205ENST00000557275 NLRP2Q9NX02 1062 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 TRMT1Q9NXH9 659 aaKnown RBP9.92□□□□□ -0.82
SYNE3-205ENST00000557275 CTTNBP2NLQ9P2B4 639 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 IFIT1P09914 478 aaKnown RBP9.92□□□□□ -0.82
SYNE3-205ENST00000557275 SMIM24O75264 130 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 ZNF354CQ86Y25 554 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 MYH10P35580 1976 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 RPL13P26373 211 aaKnown RBP9.92□□□□□ -0.82
SYNE3-205ENST00000557275 PPFIA4O75335 1185 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 STAT6P42226 847 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 PLCB3Q01970 1234 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 RASEFQ8IZ41 740 aa9.92□□□□□ -0.82
SYNE3-205ENST00000557275 GCKP35557 465 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 GNAQP50148 359 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 SPTY2D1Q68D10 685 aaPredicted RBP9.91□□□□□ -0.82
SYNE3-205ENST00000557275 ZNF444Q8N0Y2 327 aaPredicted RBP9.91□□□□□ -0.82
SYNE3-205ENST00000557275 TRIML1Q8N9V2 468 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 SYKP43405 635 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 RIOK3O14730 519 aaKnown RBP9.91□□□□□ -0.82
SYNE3-205ENST00000557275 PHACTR2O75167 634 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 MX1P20591 662 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 PODNQ7Z5L7 613 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 CCDC125Q86Z20 511 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 TATP17735 454 aaPredicted RBP9.91□□□□□ -0.82
SYNE3-205ENST00000557275 PDXDC1Q6P996 788 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 PFDN6O15212 129 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 ANKRD20A3Q5VUR7 823 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 GOLGA8CPA6NN73 597 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 BAG3O95817 575 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 KCNK9Q9NPC2 374 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 E7EVH7 732 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 SCINQ9Y6U3 715 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 HS2ST1Q7LGA3 356 aa9.91□□□□□ -0.82
SYNE3-205ENST00000557275 GFAPP14136 432 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 NEK11Q8NG66 645 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 TRERF1Q96PN7 1200 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 STARD3NLO95772 234 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 SYT1P21579 422 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 CNNM2Q9H8M5 875 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 ANKFY1Q9P2R3 1169 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 LRRD1A4D1F6 860 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 ZNF213O14771 459 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 PHEXP78562 749 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 SYCE1Q8N0S2 351 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 NEK1Q96PY6 1258 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 ZNF692Q9BU19 519 aaPredicted RBP9.9□□□□□ -0.82
SYNE3-205ENST00000557275 RNASELQ05823 741 aaKnown RBP9.9□□□□□ -0.82
SYNE3-205ENST00000557275 POLR3DP05423 398 aaPredicted RBP9.9□□□□□ -0.82
SYNE3-205ENST00000557275 NOLC1Q14978 699 aaKnown RBP eCLIP9.9□□□□□ -0.82
SYNE3-205ENST00000557275 MINK1Q8N4C8 1332 aaPredicted RBP9.9□□□□□ -0.82
SYNE3-205ENST00000557275 CALML3P27482 149 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 SLMAPQ14BN4 828 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 SLC4A2P04920 1241 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 EVI5LQ96CN4 794 aa9.9□□□□□ -0.82
SYNE3-205ENST00000557275 SAMM50Q9Y512 469 aa9.9□□□□□ -0.83
SYNE3-205ENST00000557275 FNBP4Q8N3X1 1017 aaPredicted RBP9.9□□□□□ -0.83
SYNE3-205ENST00000557275 HFM1A2PYH4 1435 aa9.9□□□□□ -0.83
SYNE3-205ENST00000557275 CALM1P0DP23 149 aa9.9□□□□□ -0.83
SYNE3-205ENST00000557275 CALM2P0DP24 149 aa9.9□□□□□ -0.83
SYNE3-205ENST00000557275 CALM3P0DP25 149 aa9.9□□□□□ -0.83
SYNE3-205ENST00000557275 MAIP1Q8WWC4 291 aa9.9□□□□□ -0.83
SYNE3-205ENST00000557275 HLA-DOAP06340 250 aa9.89□□□□□ -0.83
SYNE3-205ENST00000557275 TROVE2P10155 538 aaKnown RBP eCLIP9.89□□□□□ -0.83
SYNE3-205ENST00000557275 ALDH1L2Q3SY69 923 aa9.89□□□□□ -0.83
SYNE3-205ENST00000557275 UBLCP1Q8WVY7 318 aaPredicted RBP9.89□□□□□ -0.83
SYNE3-205ENST00000557275 PPP1R9AQ9ULJ8 1098 aa9.89□□□□□ -0.83
SYNE3-205ENST00000557275 HEATR3Q7Z4Q2 680 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms