RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 CFAP45Q9UL16 551 aa18■□□□□ 0.47
TMEM55B-207ENST00000557041 JAG2Q9Y219 1238 aa18■□□□□ 0.47
TMEM55B-207ENST00000557041 TDO2P48775 406 aa18■□□□□ 0.47
TMEM55B-207ENST00000557041 SMIM5Q71RC9 77 aa18■□□□□ 0.47
TMEM55B-207ENST00000557041 ZKSCAN3Q9BRR0 538 aa18■□□□□ 0.47
TMEM55B-207ENST00000557041 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18■□□□□ 0.47
TMEM55B-207ENST00000557041 M0R2C6 588 aa17.99■□□□□ 0.47
TMEM55B-207ENST00000557041 ATG9AQ7Z3C6 839 aa17.99■□□□□ 0.47
TMEM55B-207ENST00000557041 PPP1R9BQ96SB3 815 aa17.99■□□□□ 0.47
TMEM55B-207ENST00000557041 NCAPD2Q15021 1401 aa17.99■□□□□ 0.47
TMEM55B-207ENST00000557041 GOLGA6L6A8MZA4 724 aa17.99■□□□□ 0.47
TMEM55B-207ENST00000557041 CPLX2Q6PUV4 134 aaKnown RBP17.99■□□□□ 0.47
TMEM55B-207ENST00000557041 LEO1Q8WVC0 666 aaPredicted RBP17.99■□□□□ 0.47
TMEM55B-207ENST00000557041 ZKSCAN5Q9Y2L8 839 aa17.99■□□□□ 0.47
TMEM55B-207ENST00000557041 GPAA1O43292 621 aa17.99■□□□□ 0.47
TMEM55B-207ENST00000557041 NR1I2O75469 434 aa17.99■□□□□ 0.47
TMEM55B-207ENST00000557041 CCAR1Q8IX12 1150 aaKnown RBP17.99■□□□□ 0.47
TMEM55B-207ENST00000557041 GTF3C6Q969F1 213 aa17.99■□□□□ 0.47
TMEM55B-207ENST00000557041 ZNF165P49910 485 aa17.98■□□□□ 0.47
TMEM55B-207ENST00000557041 STOX1Q6ZVD7 989 aa17.98■□□□□ 0.47
TMEM55B-207ENST00000557041 CREBRFQ8IUR6 639 aa17.98■□□□□ 0.47
TMEM55B-207ENST00000557041 FSIP1Q8NA03 581 aa17.98■□□□□ 0.47
TMEM55B-207ENST00000557041 CARD10Q9BWT7 1032 aa17.98■□□□□ 0.47
TMEM55B-207ENST00000557041 NWD1Q149M9 1564 aa17.98■□□□□ 0.47
TMEM55B-207ENST00000557041 MAST3O60307 1309 aa17.98■□□□□ 0.47
TMEM55B-207ENST00000557041 HMGB1P09429 215 aaKnown RBP17.98■□□□□ 0.47
TMEM55B-207ENST00000557041 TYRO3Q06418 890 aa17.98■□□□□ 0.47
TMEM55B-207ENST00000557041 FGAP02671 866 aa17.97■□□□□ 0.47
TMEM55B-207ENST00000557041 MARCKSP29966 332 aaPredicted RBP17.97■□□□□ 0.47
TMEM55B-207ENST00000557041 CHAF1AQ13111 956 aaPredicted RBP17.97■□□□□ 0.47
TMEM55B-207ENST00000557041 TRIM29Q14134 588 aa17.97■□□□□ 0.47
TMEM55B-207ENST00000557041 PUS7LQ9H0K6 701 aaKnown RBP17.97■□□□□ 0.47
TMEM55B-207ENST00000557041 RAI14Q9P0K7 980 aa17.97■□□□□ 0.47
TMEM55B-207ENST00000557041 UQCRHLA0A096LP55 91 aa17.97■□□□□ 0.47
TMEM55B-207ENST00000557041 UQCRHP07919 91 aa17.97■□□□□ 0.47
TMEM55B-207ENST00000557041 NAPBQ9H115 298 aa17.97■□□□□ 0.47
TMEM55B-207ENST00000557041 INCENPQ9NQS7 918 aa17.97■□□□□ 0.47
TMEM55B-207ENST00000557041 PXDNLA1KZ92 1463 aa17.97■□□□□ 0.47
TMEM55B-207ENST00000557041 ST3GAL1Q11201 340 aa17.97■□□□□ 0.47
TMEM55B-207ENST00000557041 NIP7Q9Y221 180 aaKnown RBP eCLIP17.97■□□□□ 0.47
TMEM55B-207ENST00000557041 B4E1Z4 1266 aa17.96■□□□□ 0.47
TMEM55B-207ENST00000557041 USP42Q9H9J4 1324 aaKnown RBP17.96■□□□□ 0.47
TMEM55B-207ENST00000557041 EPB41L2O43491 1005 aaKnown RBP17.96■□□□□ 0.47
TMEM55B-207ENST00000557041 PHKA1P46020 1223 aa17.96■□□□□ 0.47
TMEM55B-207ENST00000557041 A0A1B0GVL5 298 aa17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 MCM5P33992 734 aa17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 ZNF396Q96N95 335 aaPredicted RBP17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 TEX13AQ9BXU3 409 aaPredicted RBP17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 TNS3Q68CZ2 1445 aa17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 DDB1Q16531 1140 aa17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 MAGEB6Q8N7X4 407 aa17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 SEC31BQ9NQW1 1179 aa17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 RABL6Q3YEC7 729 aaPredicted RBP17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 FAM182BQ5T319 152 aa17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 NCOA7Q8NI08 942 aa17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 TSC1Q92574 1164 aa17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 PHKBQ93100 1093 aa17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 HELLSQ9NRZ9 838 aa17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 ATG3Q9NT62 314 aa17.95■□□□□ 0.46
TMEM55B-207ENST00000557041 ZNF609O15014 1411 aa17.94■□□□□ 0.46
TMEM55B-207ENST00000557041 DHX16O60231 1041 aaKnown RBP17.94■□□□□ 0.46
TMEM55B-207ENST00000557041 NOL7Q9UMY1 257 aaKnown RBP17.94■□□□□ 0.46
TMEM55B-207ENST00000557041 IFIT3O14879 490 aaKnown RBP17.94■□□□□ 0.46
TMEM55B-207ENST00000557041 IGHMBP2P38935 993 aaKnown RBP17.94■□□□□ 0.46
TMEM55B-207ENST00000557041 HMGN5P82970 282 aaKnown RBP17.94■□□□□ 0.46
TMEM55B-207ENST00000557041 HSP90AA4PQ58FG1 418 aa17.94■□□□□ 0.46
TMEM55B-207ENST00000557041 UTYO14607 1347 aa17.94■□□□□ 0.46
TMEM55B-207ENST00000557041 USP28Q96RU2 1077 aa17.93■□□□□ 0.46
TMEM55B-207ENST00000557041 NFAT5O94916 1531 aa17.93■□□□□ 0.46
TMEM55B-207ENST00000557041 ADD1P35611 737 aaKnown RBP17.93■□□□□ 0.46
TMEM55B-207ENST00000557041 ZMYM1Q5SVZ6 1142 aa17.93■□□□□ 0.46
TMEM55B-207ENST00000557041 CMTR1Q8N1G2 835 aaKnown RBP17.93■□□□□ 0.46
TMEM55B-207ENST00000557041 ZBTB38Q8NAP3 1195 aaPredicted RBP17.93■□□□□ 0.46
TMEM55B-207ENST00000557041 ERICH2A1L162 156 aa17.92■□□□□ 0.46
TMEM55B-207ENST00000557041 ARMT1Q9H993 441 aa17.92■□□□□ 0.46
TMEM55B-207ENST00000557041 DENND2AQ9ULE3 1009 aa17.92■□□□□ 0.46
TMEM55B-207ENST00000557041 TOPAZ1Q8N9V7 1692 aa17.92■□□□□ 0.46
TMEM55B-207ENST00000557041 TMEM67Q5HYA8 995 aa17.92■□□□□ 0.46
TMEM55B-207ENST00000557041 CCDC186Q7Z3E2 898 aa17.92■□□□□ 0.46
TMEM55B-207ENST00000557041 ZNF532Q9HCE3 1301 aa17.92■□□□□ 0.46
TMEM55B-207ENST00000557041 CCDC69A6NI79 296 aa17.92■□□□□ 0.46
TMEM55B-207ENST00000557041 SMC2O95347 1197 aa17.92■□□□□ 0.46
TMEM55B-207ENST00000557041 CTDSPL2Q05D32 466 aa17.92■□□□□ 0.46
TMEM55B-207ENST00000557041 AIFM3Q96NN9 605 aa17.92■□□□□ 0.46
TMEM55B-207ENST00000557041 PTGS1P23219 599 aa17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 METAP2P50579 478 aaKnown RBP eCLIP17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 AKAP17AQ02040 695 aaKnown RBP17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 MAP3K12Q12852 859 aa17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 GIGYF2Q6Y7W6 1299 aaKnown RBP17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 NLRP10Q86W26 655 aa17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 MST1RQ04912 1400 aa17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 LTN1O94822 1766 aa17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 FMN2Q9NZ56 1722 aa17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 MBD4O95243 580 aa17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 PDIA3P30101 505 aaKnown RBP17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 CTSWP56202 376 aa17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 ZSCAN25Q6NSZ9 544 aa17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 FAM200AQ8TCP9 573 aa17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 APPBP2Q92624 585 aa17.91■□□□□ 0.46
TMEM55B-207ENST00000557041 DDX19AQ9NUU7 478 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms