RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 FGFR2P21802 821 aa28.94■■■□□ 2.22
SIX4-203ENST00000556952 CCDC88AQ3V6T2 1871 aa28.94■■■□□ 2.22
SIX4-203ENST00000556952 MINPP1Q9UNW1 487 aa28.93■■■□□ 2.22
SIX4-203ENST00000556952 LRRC37AA6NMS7 1700 aa28.93■■■□□ 2.22
SIX4-203ENST00000556952 TRIM6-TRIM34B2RNG4 842 aa28.92■■■□□ 2.22
SIX4-203ENST00000556952 XAGE2Q96GT9 111 aa28.92■■■□□ 2.22
SIX4-203ENST00000556952 SLC5A1P13866 664 aa28.92■■■□□ 2.22
SIX4-203ENST00000556952 CNTROBQ8N137 903 aa28.92■■■□□ 2.22
SIX4-203ENST00000556952 CCDC158Q5M9N0 1113 aa28.91■■■□□ 2.22
SIX4-203ENST00000556952 HELBQ8NG08 1087 aaPredicted RBP28.91■■■□□ 2.22
SIX4-203ENST00000556952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.91■■■□□ 2.22
SIX4-203ENST00000556952 ANKRD2Q9GZV1 360 aa28.91■■■□□ 2.22
SIX4-203ENST00000556952 PPEF1O14829 653 aaPredicted RBP28.9■■■□□ 2.22
SIX4-203ENST00000556952 GORABQ5T7V8 394 aa28.9■■■□□ 2.22
SIX4-203ENST00000556952 SNED1Q8TER0 1413 aa28.9■■■□□ 2.22
SIX4-203ENST00000556952 NFKBIEO00221 500 aa28.89■■■□□ 2.22
SIX4-203ENST00000556952 TAF5LO75529 589 aa28.89■■■□□ 2.22
SIX4-203ENST00000556952 RASSF7Q02833 373 aa28.89■■■□□ 2.22
SIX4-203ENST00000556952 CASC1Q6TDU7 716 aa28.89■■■□□ 2.22
SIX4-203ENST00000556952 TMC4Q7Z404 712 aa28.89■■■□□ 2.22
SIX4-203ENST00000556952 RILPL2Q969X0 211 aa28.89■■■□□ 2.22
SIX4-203ENST00000556952 BBOX1O75936 387 aa28.88■■■□□ 2.21
SIX4-203ENST00000556952 IFIT1P09914 478 aaKnown RBP28.88■■■□□ 2.21
SIX4-203ENST00000556952 ADORA1P30542 326 aa28.88■■■□□ 2.21
SIX4-203ENST00000556952 TBC1D9Q6ZT07 1266 aa28.88■■■□□ 2.21
SIX4-203ENST00000556952 EIF5BO60841 1220 aaKnown RBP28.88■■■□□ 2.21
SIX4-203ENST00000556952 UBE4AQ14139 1066 aa28.88■■■□□ 2.21
SIX4-203ENST00000556952 BOLA2Q9H3K6 86 aa28.88■■■□□ 2.21
SIX4-203ENST00000556952 EVI5LQ96CN4 794 aa28.87■■■□□ 2.21
SIX4-203ENST00000556952 HAUS7Q99871 368 aa28.87■■■□□ 2.21
SIX4-203ENST00000556952 CCDC93Q567U6 631 aa28.86■■■□□ 2.21
SIX4-203ENST00000556952 TTC39AQ5SRH9 613 aa28.86■■■□□ 2.21
SIX4-203ENST00000556952 ZNF512BQ96KM6 892 aaPredicted RBP28.86■■■□□ 2.21
SIX4-203ENST00000556952 PRELPP51888 382 aa28.85■■■□□ 2.21
SIX4-203ENST00000556952 MAP4K4O95819 1239 aaPredicted RBP28.84■■■□□ 2.21
SIX4-203ENST00000556952 SOGA3Q5TF21 947 aa28.84■■■□□ 2.21
SIX4-203ENST00000556952 ATP6V0A2Q9Y487 856 aa28.84■■■□□ 2.21
SIX4-203ENST00000556952 AKAP11Q9UKA4 1901 aa28.84■■■□□ 2.21
SIX4-203ENST00000556952 DICER1Q9UPY3 1922 aaKnown RBP28.82■■■□□ 2.2
SIX4-203ENST00000556952 LTBP1Q14766 1721 aa28.82■■■□□ 2.2
SIX4-203ENST00000556952 UQCRFS1P1P0C7P4 283 aa28.82■■■□□ 2.2
SIX4-203ENST00000556952 RFX7Q2KHR2 1363 aa28.82■■■□□ 2.2
SIX4-203ENST00000556952 XDHP47989 1333 aa28.81■■■□□ 2.2
SIX4-203ENST00000556952 KCNJ4P48050 445 aa28.81■■■□□ 2.2
SIX4-203ENST00000556952 CCDC102BQ68D86 513 aa28.81■■■□□ 2.2
SIX4-203ENST00000556952 TIAM2Q8IVF5 1701 aa28.81■■■□□ 2.2
SIX4-203ENST00000556952 ARID4AP29374 1257 aaPredicted RBP28.8■■■□□ 2.2
SIX4-203ENST00000556952 SP8Q8IXZ3 490 aa28.8■■■□□ 2.2
SIX4-203ENST00000556952 TAOK3Q9H2K8 898 aa28.8■■■□□ 2.2
SIX4-203ENST00000556952 LEMD3Q9Y2U8 911 aa28.8■■■□□ 2.2
SIX4-203ENST00000556952 DUOX1Q9NRD9 1551 aa28.8■■■□□ 2.2
SIX4-203ENST00000556952 SNAP23O00161 211 aa28.79■■■□□ 2.2
SIX4-203ENST00000556952 TICAM2Q86XR7 235 aa28.79■■■□□ 2.2
SIX4-203ENST00000556952 DNAJC2Q99543 621 aaKnown RBP28.79■■■□□ 2.2
SIX4-203ENST00000556952 UPF2Q9HAU5 1272 aaKnown RBP28.79■■■□□ 2.2
SIX4-203ENST00000556952 LTBP3Q9NS15 1303 aa28.79■■■□□ 2.2
SIX4-203ENST00000556952 SEC24BO95487 1268 aa28.79■■■□□ 2.2
SIX4-203ENST00000556952 CHMLP26374 656 aa28.79■■■□□ 2.2
SIX4-203ENST00000556952 CC2D2BQ6DHV5 1058 aa28.79■■■□□ 2.2
SIX4-203ENST00000556952 RTKN2Q8IZC4 609 aa28.79■■■□□ 2.2
SIX4-203ENST00000556952 ANKIB1Q9P2G1 1089 aa28.79■■■□□ 2.2
SIX4-203ENST00000556952 ZNF804BA4D1E1 1349 aa28.78■■■□□ 2.2
SIX4-203ENST00000556952 HIP1O00291 1037 aa28.78■■■□□ 2.2
SIX4-203ENST00000556952 PHKA1P46020 1223 aa28.78■■■□□ 2.2
SIX4-203ENST00000556952 FKBP4Q02790 459 aaKnown RBP eCLIP28.78■■■□□ 2.2
SIX4-203ENST00000556952 C9orf131Q5VYM1 1079 aa28.78■■■□□ 2.2
SIX4-203ENST00000556952 PAG1Q9NWQ8 432 aa28.78■■■□□ 2.2
SIX4-203ENST00000556952 MYH13Q9UKX3 1938 aa28.78■■■□□ 2.2
SIX4-203ENST00000556952 CAVIN4Q5BKX8 364 aa28.76■■■□□ 2.19
SIX4-203ENST00000556952 FSD1Q9BTV5 496 aa28.76■■■□□ 2.19
SIX4-203ENST00000556952 PODXL2Q9NZ53 605 aa28.76■■■□□ 2.19
SIX4-203ENST00000556952 RNF181Q9P0P0 153 aa28.76■■■□□ 2.19
SIX4-203ENST00000556952 MYH7P12883 1935 aa28.76■■■□□ 2.19
SIX4-203ENST00000556952 LMNB1P20700 586 aa28.75■■■□□ 2.19
SIX4-203ENST00000556952 YY1P25490 414 aa28.75■■■□□ 2.19
SIX4-203ENST00000556952 MCAMP43121 646 aa28.75■■■□□ 2.19
SIX4-203ENST00000556952 ZNF277Q9NRM2 450 aaPredicted RBP28.75■■■□□ 2.19
SIX4-203ENST00000556952 RBM19Q9Y4C8 960 aaKnown RBP28.75■■■□□ 2.19
SIX4-203ENST00000556952 GOLIM4O00461 696 aa28.74■■■□□ 2.19
SIX4-203ENST00000556952 ATP2B4P23634 1241 aa28.74■■■□□ 2.19
SIX4-203ENST00000556952 MFAP1P55081 439 aaKnown RBP28.74■■■□□ 2.19
SIX4-203ENST00000556952 GPSM2P81274 684 aa28.74■■■□□ 2.19
SIX4-203ENST00000556952 SCARF1Q14162 830 aa28.74■■■□□ 2.19
SIX4-203ENST00000556952 KBTBD3Q8NAB2 608 aa28.74■■■□□ 2.19
SIX4-203ENST00000556952 PSMD1Q99460 953 aa28.74■■■□□ 2.19
SIX4-203ENST00000556952 TMX4Q9H1E5 349 aaPredicted RBP28.74■■■□□ 2.19
SIX4-203ENST00000556952 GNL3LQ9NVN8 582 aaKnown RBP28.74■■■□□ 2.19
SIX4-203ENST00000556952 DOCK2Q92608 1830 aa28.73■■■□□ 2.19
SIX4-203ENST00000556952 MPNDQ8N594 471 aa28.73■■■□□ 2.19
SIX4-203ENST00000556952 EDC3Q96F86 508 aaKnown RBP28.73■■■□□ 2.19
SIX4-203ENST00000556952 ESYT1Q9BSJ8 1104 aa28.73■■■□□ 2.19
SIX4-203ENST00000556952 DIAPH3Q9NSV4 1193 aa28.73■■■□□ 2.19
SIX4-203ENST00000556952 NDUFB9Q9Y6M9 179 aa28.73■■■□□ 2.19
SIX4-203ENST00000556952 ZBTB22O15209 634 aa28.72■■■□□ 2.19
SIX4-203ENST00000556952 BCAMP50895 628 aa28.72■■■□□ 2.19
SIX4-203ENST00000556952 C15orf52Q6ZUT6 534 aaKnown RBP28.72■■■□□ 2.19
SIX4-203ENST00000556952 GGA1Q9UJY5 639 aa28.72■■■□□ 2.19
SIX4-203ENST00000556952 NSFL1CQ9UNZ2 370 aaKnown RBP28.72■■■□□ 2.19
SIX4-203ENST00000556952 COL4A5P29400 1685 aa28.72■■■□□ 2.19
SIX4-203ENST00000556952 IRS2Q9Y4H2 1338 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms