RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 WASHC4Q2M389 1173 aa5.82□□□□□ -1.48
ATXN3-242ENST00000556644 SUSD4Q5VX71 490 aa5.82□□□□□ -1.48
ATXN3-242ENST00000556644 OTUD7BQ6GQQ9 843 aa5.82□□□□□ -1.48
ATXN3-242ENST00000556644 FAM109BQ6ICB4 259 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-242ENST00000556644 NBPF10Q6P3W6 841 aaKnown RBP5.82□□□□□ -1.48
ATXN3-242ENST00000556644 POTEGQ6S5H5 508 aa5.82□□□□□ -1.48
ATXN3-242ENST00000556644 SP8Q8IXZ3 490 aa5.82□□□□□ -1.48
ATXN3-242ENST00000556644 PAWRQ96IZ0 340 aaKnown RBP5.82□□□□□ -1.48
ATXN3-242ENST00000556644 NECAB3Q96P71 396 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-242ENST00000556644 FMNL2Q96PY5 1086 aa5.82□□□□□ -1.48
ATXN3-242ENST00000556644 MYOZ2Q9NPC6 264 aa5.82□□□□□ -1.48
ATXN3-242ENST00000556644 ZNF646O15015 1829 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-242ENST00000556644 SCN9AQ15858 1988 aa5.82□□□□□ -1.48
ATXN3-242ENST00000556644 C6orf229H3BNL8 230 aa5.81□□□□□ -1.48
ATXN3-242ENST00000556644 SASH1O94885 1247 aa5.81□□□□□ -1.48
ATXN3-242ENST00000556644 TFRCP02786 760 aaKnown RBP5.81□□□□□ -1.48
ATXN3-242ENST00000556644 ZBTB48P10074 688 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-242ENST00000556644 GRK4P32298 578 aa5.81□□□□□ -1.48
ATXN3-242ENST00000556644 MRE11P49959 708 aa5.81□□□□□ -1.48
ATXN3-242ENST00000556644 MDM2Q00987 491 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-242ENST00000556644 RAET1EQ8TD07 263 aa5.81□□□□□ -1.48
ATXN3-242ENST00000556644 SIN3AQ96ST3 1273 aa5.81□□□□□ -1.48
ATXN3-242ENST00000556644 UHRF1Q96T88 793 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-242ENST00000556644 P2RX7Q99572 595 aaKnown RBP5.81□□□□□ -1.48
ATXN3-242ENST00000556644 LRFN3Q9BTN0 628 aa5.81□□□□□ -1.48
ATXN3-242ENST00000556644 RIPOR2Q9Y4F9 1068 aa5.81□□□□□ -1.48
ATXN3-242ENST00000556644 CACNA1GO43497 2377 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 SGPL1O95470 568 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 NTSR2O95665 410 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 VIL1P09327 827 aaKnown RBP5.8□□□□□ -1.48
ATXN3-242ENST00000556644 HMOX1P09601 288 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 USP17L8P0C7I0 530 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 CTGFP29279 349 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 LACTBP83111 547 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-242ENST00000556644 TEFQ10587 303 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 NEUROD1Q13562 356 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 POLA2Q14181 598 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 KIF22Q14807 665 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 MTHFSDQ2M296 383 aaKnown RBP5.8□□□□□ -1.48
ATXN3-242ENST00000556644 BRI3BPQ8WY22 251 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 PPM1EQ8WY54 764 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 ZNF428Q96B54 188 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 NLRP3Q96P20 1036 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 DEFB118Q96PH6 123 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 C1QTNF1Q9BXJ1 281 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 SEMA6BQ9H3T3 888 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 ZFYVE28Q9HCC9 887 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 POLLQ9UGP5 575 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 NSFL1CQ9UNZ2 370 aaKnown RBP5.8□□□□□ -1.48
ATXN3-242ENST00000556644 NCOR1O75376 2440 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 SSC5DA1L4H1 1573 aa5.8□□□□□ -1.48
ATXN3-242ENST00000556644 BDP1A6H8Y1 2624 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 CCL15-CCL14A0A0B4J2E2 113 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 FAM86C2PA6NEL3 165 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 BBOX1O75936 387 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 HCLS1P14317 486 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-242ENST00000556644 OSBPP22059 807 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 UBXN2AP68543 259 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 GPSM2P81274 684 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 CCL15Q16663 113 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 RSBN1LQ6PCB5 846 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-242ENST00000556644 PODNQ7Z5L7 613 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 FAM43AQ8N2R8 423 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 TRIM47Q96LD4 638 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 MXD3Q9BW11 206 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 TTYH1Q9H313 450 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-242ENST00000556644 ZBTB3Q9H5J0 574 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 ELP3Q9H9T3 547 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 SRRDQ9UH36 339 aa5.79□□□□□ -1.48
ATXN3-242ENST00000556644 MYPNQ86TC9 1320 aa5.78□□□□□ -1.48
ATXN3-242ENST00000556644 COL2A1P02458 1487 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-242ENST00000556644 G3V3G9 751 aa5.78□□□□□ -1.48
ATXN3-242ENST00000556644 NPM3O75607 178 aaKnown RBP5.78□□□□□ -1.48
ATXN3-242ENST00000556644 ELNP15502 786 aa5.78□□□□□ -1.48
ATXN3-242ENST00000556644 PSMC4P43686 418 aa5.78□□□□□ -1.48
ATXN3-242ENST00000556644 GRAPQ13588 217 aa5.78□□□□□ -1.48
ATXN3-242ENST00000556644 DCAF8Q5TAQ9 597 aa5.78□□□□□ -1.48
ATXN3-242ENST00000556644 TTLL7Q6ZT98 887 aa5.78□□□□□ -1.48
ATXN3-242ENST00000556644 DDX46Q7L014 1031 aaKnown RBP5.78□□□□□ -1.48
ATXN3-242ENST00000556644 NECAB2Q7Z6G3 386 aa5.78□□□□□ -1.48
ATXN3-242ENST00000556644 DDX60Q8IY21 1712 aaKnown RBP5.78□□□□□ -1.48
ATXN3-242ENST00000556644 AGBL3Q8NEM8 1001 aa5.78□□□□□ -1.48
ATXN3-242ENST00000556644 GRAPLQ8TC17 118 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-242ENST00000556644 EPHX3Q9H6B9 360 aa5.78□□□□□ -1.48
ATXN3-242ENST00000556644 ARIH1Q9Y4X5 557 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-242ENST00000556644 COL4A1P02462 1669 aa5.78□□□□□ -1.48
ATXN3-242ENST00000556644 IBTKQ9P2D0 1353 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-242ENST00000556644 TESPA1A2RU30 521 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-242ENST00000556644 WNT10BO00744 389 aa5.77□□□□□ -1.49
ATXN3-242ENST00000556644 FMNL1O95466 1100 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-242ENST00000556644 PRMT2P55345 433 aa5.77□□□□□ -1.49
ATXN3-242ENST00000556644 PRKCZQ05513 592 aa5.77□□□□□ -1.49
ATXN3-242ENST00000556644 IL17REQ8NFR9 667 aa5.77□□□□□ -1.49
ATXN3-242ENST00000556644 FBXW7Q969H0 707 aa5.77□□□□□ -1.49
ATXN3-242ENST00000556644 OPTNQ96CV9 577 aa5.77□□□□□ -1.49
ATXN3-242ENST00000556644 MS4A4AQ96JQ5 239 aa5.77□□□□□ -1.49
ATXN3-242ENST00000556644 ASB2Q96Q27 587 aa5.77□□□□□ -1.49
ATXN3-242ENST00000556644 GMLQ99445 158 aa5.77□□□□□ -1.49
ATXN3-242ENST00000556644 CPA4Q9UI42 421 aa5.77□□□□□ -1.49
ATXN3-242ENST00000556644 LRRC37AA6NMS7 1700 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms