RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 MCM5P33992 734 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 NOS2P35228 1153 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 EIF5P55010 431 aaKnown RBP7.37□□□□□ -1.23
TDP1-215ENST00000556498 RASA3Q14644 834 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 FILIP1Q7Z7B0 1213 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 RHBDD1Q8TEB9 315 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 ZDHHC1Q8WTX9 485 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 SREK1Q8WXA9 508 aaKnown RBP7.37□□□□□ -1.23
TDP1-215ENST00000556498 ZNF396Q96N95 335 aaPredicted RBP7.37□□□□□ -1.23
TDP1-215ENST00000556498 SPOCK3Q9BQ16 436 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 LZTS2Q9BRK4 669 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 NOL10Q9BSC4 688 aaKnown RBP7.37□□□□□ -1.23
TDP1-215ENST00000556498 MKNK1Q9BUB5 465 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 NIFKQ9BYG3 293 aaKnown RBP7.37□□□□□ -1.23
TDP1-215ENST00000556498 AAASQ9NRG9 546 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 CABP1Q9NZU7 370 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 SEPT3Q9UH03 358 aa7.37□□□□□ -1.23
TDP1-215ENST00000556498 FBXO9Q9UK97 447 aaPredicted RBP7.37□□□□□ -1.23
TDP1-215ENST00000556498 SPATA31C2B4DYI2 1134 aa7.36□□□□□ -1.23
TDP1-215ENST00000556498 EML1O00423 815 aa7.36□□□□□ -1.23
TDP1-215ENST00000556498 WDHD1O75717 1129 aaPredicted RBP7.36□□□□□ -1.23
TDP1-215ENST00000556498 NAT1P18440 290 aa7.36□□□□□ -1.23
TDP1-215ENST00000556498 SERPINB4P48594 390 aa7.36□□□□□ -1.23
TDP1-215ENST00000556498 HIRAP54198 1017 aaPredicted RBP7.36□□□□□ -1.23
TDP1-215ENST00000556498 IFT88Q13099 833 aa7.36□□□□□ -1.23
TDP1-215ENST00000556498 GNASQ5JWF2 1037 aa7.36□□□□□ -1.23
TDP1-215ENST00000556498 SASS6Q6UVJ0 657 aa7.36□□□□□ -1.23
TDP1-215ENST00000556498 ZSCAN30Q86W11 494 aa7.36□□□□□ -1.23
TDP1-215ENST00000556498 NLRP13Q86W25 1043 aa7.36□□□□□ -1.23
TDP1-215ENST00000556498 L3MBTL2Q969R5 705 aa7.36□□□□□ -1.23
TDP1-215ENST00000556498 VTI1AQ96AJ9 217 aa7.36□□□□□ -1.23
TDP1-215ENST00000556498 GNL3LQ9NVN8 582 aaKnown RBP7.36□□□□□ -1.23
TDP1-215ENST00000556498 CHMP3Q9Y3E7 222 aa7.36□□□□□ -1.23
TDP1-215ENST00000556498 SOS2Q07890 1332 aaPredicted RBP7.35□□□□□ -1.23
TDP1-215ENST00000556498 TTLL8A6PVC2 850 aa7.35□□□□□ -1.23
TDP1-215ENST00000556498 NAA30Q147X3 362 aaPredicted RBP7.35□□□□□ -1.23
TDP1-215ENST00000556498 PDCD2Q16342 344 aaPredicted RBP7.35□□□□□ -1.23
TDP1-215ENST00000556498 C4orf46Q504U0 113 aa7.35□□□□□ -1.23
TDP1-215ENST00000556498 C4orf17Q53FE4 359 aa7.35□□□□□ -1.23
TDP1-215ENST00000556498 PRICKLE2Q7Z3G6 844 aa7.35□□□□□ -1.23
TDP1-215ENST00000556498 IQCF2Q8IXL9 164 aa7.35□□□□□ -1.23
TDP1-215ENST00000556498 PDILTQ8N807 584 aa7.35□□□□□ -1.23
TDP1-215ENST00000556498 SMCR8Q8TEV9 937 aaPredicted RBP7.35□□□□□ -1.23
TDP1-215ENST00000556498 GTF3C2Q8WUA4 911 aaPredicted RBP7.35□□□□□ -1.23
TDP1-215ENST00000556498 C17orf50Q8WW18 174 aa7.35□□□□□ -1.23
TDP1-215ENST00000556498 TEKT1Q969V4 418 aa7.35□□□□□ -1.23
TDP1-215ENST00000556498 ZFP42Q96MM3 310 aa7.35□□□□□ -1.23
TDP1-215ENST00000556498 RETREG1Q9H6L5 497 aa7.35□□□□□ -1.23
TDP1-215ENST00000556498 VEZTQ9HBM0 779 aa7.35□□□□□ -1.23
TDP1-215ENST00000556498 PUF60Q9UHX1 559 aaKnown RBP7.35□□□□□ -1.23
TDP1-215ENST00000556498 ZNF232Q9UNY5 417 aa7.35□□□□□ -1.23
TDP1-215ENST00000556498 THRAP3Q9Y2W1 955 aaKnown RBP7.35□□□□□ -1.23
TDP1-215ENST00000556498 PARP3Q9Y6F1 533 aa7.35□□□□□ -1.23
TDP1-215ENST00000556498 UQCRHLA0A096LP55 91 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 CCDC194A0A1B0GVG4 234 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 CFAP69A5D8W1 941 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 ST8SIA5O15466 376 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 UQCRHP07919 91 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 KCNA2P16389 499 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 MSNP26038 577 aaKnown RBP7.34□□□□□ -1.23
TDP1-215ENST00000556498 TRPC1P48995 793 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 GYS2P54840 703 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 POU4F2Q12837 409 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 WDR44Q5JSH3 913 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 SH3PXD2AQ5TCZ1 1133 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 LYSMD3Q7Z3D4 306 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 KIF2CQ99661 725 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 IRX2Q9BZI1 471 aaPredicted RBP7.34□□□□□ -1.23
TDP1-215ENST00000556498 ATP13A2Q9NQ11 1180 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 ETAA1Q9NY74 926 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 OGFRQ9NZT2 677 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 EGFL7Q9UHF1 273 aa7.34□□□□□ -1.23
TDP1-215ENST00000556498 SOWAHDA6NJG2 315 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 ABL1P00519 1130 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 XRCC6P12956 609 aaKnown RBP eCLIP7.33□□□□□ -1.24
TDP1-215ENST00000556498 CHAF1AQ13111 956 aaPredicted RBP7.33□□□□□ -1.24
TDP1-215ENST00000556498 PSMD2Q13200 908 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 DCTN1Q14203 1278 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 BECN1Q14457 450 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 BMS1Q14692 1282 aaKnown RBP7.33□□□□□ -1.24
TDP1-215ENST00000556498 TSNAXIP1Q2TAA8 658 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 NOM1Q5C9Z4 860 aaKnown RBP7.33□□□□□ -1.24
TDP1-215ENST00000556498 SOGA3Q5TF21 947 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 WWC2Q6AWC2 1192 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 C16orf87Q6PH81 154 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 SND1Q7KZF4 910 aaKnown RBP eCLIP7.33□□□□□ -1.24
TDP1-215ENST00000556498 TAX1BP1Q86VP1 789 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 TDRD7Q8NHU6 1098 aaKnown RBP7.33□□□□□ -1.24
TDP1-215ENST00000556498 SCYL1Q96KG9 808 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 MMTAG2Q9BU76 263 aaKnown RBP7.33□□□□□ -1.24
TDP1-215ENST00000556498 RSPH14Q9UHP6 348 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 ODF2LQ9ULJ1 636 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 HCN4Q9Y3Q4 1203 aa7.33□□□□□ -1.24
TDP1-215ENST00000556498 DNMT3AQ9Y6K1 912 aaPredicted RBP7.33□□□□□ -1.24
TDP1-215ENST00000556498 FIGNL2A6NMB9 653 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 NPHP1O15259 732 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 TIMM44O43615 452 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 ICMTO60725 284 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 TPPPO94811 219 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 BAG4O95429 457 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms