RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 GAS2L2Q8NHY3 880 aa8.21□□□□□ -1.1
HIF1A-208ENST00000556237 RTF1Q92541 710 aaKnown RBP8.21□□□□□ -1.1
HIF1A-208ENST00000556237 POM121Q96HA1 1249 aa8.21□□□□□ -1.1
HIF1A-208ENST00000556237 THUMPD2Q9BTF0 503 aaKnown RBP8.21□□□□□ -1.1
HIF1A-208ENST00000556237 CUEDC1Q9NWM3 386 aaPredicted RBP8.21□□□□□ -1.1
HIF1A-208ENST00000556237 MED1Q15648 1581 aaPredicted RBP8.21□□□□□ -1.1
HIF1A-208ENST00000556237 IL16Q14005 1332 aa8.21□□□□□ -1.1
HIF1A-208ENST00000556237 ESPNB1AK53 854 aa8.2□□□□□ -1.1
HIF1A-208ENST00000556237 CELA2BP08218 269 aaPredicted RBP8.2□□□□□ -1.1
HIF1A-208ENST00000556237 IRX6P78412 446 aaPredicted RBP8.2□□□□□ -1.1
HIF1A-208ENST00000556237 IRF5Q13568 498 aa8.2□□□□□ -1.1
HIF1A-208ENST00000556237 GDPD2Q9HCC8 539 aa8.2□□□□□ -1.1
HIF1A-208ENST00000556237 ENAMQ9NRM1 1142 aa8.2□□□□□ -1.1
HIF1A-208ENST00000556237 COG6Q9Y2V7 657 aa8.2□□□□□ -1.1
HIF1A-208ENST00000556237 NDUFB9Q9Y6M9 179 aa8.2□□□□□ -1.1
HIF1A-208ENST00000556237 CPDO75976 1380 aa8.2□□□□□ -1.1
HIF1A-208ENST00000556237 IQSEC2Q5JU85 1478 aa8.19□□□□□ -1.1
HIF1A-208ENST00000556237 HTATSF1O43719 755 aaKnown RBP8.19□□□□□ -1.1
HIF1A-208ENST00000556237 GNAI1P63096 354 aa8.19□□□□□ -1.1
HIF1A-208ENST00000556237 MCM10Q7L590 875 aa8.19□□□□□ -1.1
HIF1A-208ENST00000556237 SEPT12Q8IYM1 358 aa8.19□□□□□ -1.1
HIF1A-208ENST00000556237 GMCL1Q96IK5 515 aa8.19□□□□□ -1.1
HIF1A-208ENST00000556237 STRN4Q9NRL3 753 aa8.19□□□□□ -1.1
HIF1A-208ENST00000556237 KDRP35968 1356 aa8.19□□□□□ -1.1
HIF1A-208ENST00000556237 LTN1O94822 1766 aa8.18□□□□□ -1.1
HIF1A-208ENST00000556237 GNAT3A8MTJ3 354 aa8.18□□□□□ -1.1
HIF1A-208ENST00000556237 TATP17735 454 aaPredicted RBP8.18□□□□□ -1.1
HIF1A-208ENST00000556237 RNF144AP50876 292 aaPredicted RBP8.18□□□□□ -1.1
HIF1A-208ENST00000556237 EXOSC9Q06265 439 aaKnown RBP8.18□□□□□ -1.1
HIF1A-208ENST00000556237 AMOTQ4VCS5 1084 aa8.18□□□□□ -1.1
HIF1A-208ENST00000556237 TOM1L2Q6ZVM7 507 aa8.18□□□□□ -1.1
HIF1A-208ENST00000556237 PRICKLE2Q7Z3G6 844 aa8.18□□□□□ -1.1
HIF1A-208ENST00000556237 RAPGEF4Q8WZA2 1011 aa8.18□□□□□ -1.1
HIF1A-208ENST00000556237 TSR2Q969E8 191 aaKnown RBP8.18□□□□□ -1.1
HIF1A-208ENST00000556237 CYLDQ9NQC7 956 aa8.18□□□□□ -1.1
HIF1A-208ENST00000556237 MBIPQ9NS73 344 aa8.18□□□□□ -1.1
HIF1A-208ENST00000556237 FBXO45P0C2W1 286 aa8.17□□□□□ -1.1
HIF1A-208ENST00000556237 ZNF853P0CG23 659 aa8.17□□□□□ -1.1
HIF1A-208ENST00000556237 ZNF530Q6P9A1 599 aaPredicted RBP8.17□□□□□ -1.1
HIF1A-208ENST00000556237 FOXR1Q6PIV2 292 aa8.17□□□□□ -1.1
HIF1A-208ENST00000556237 TRIM22Q8IYM9 498 aa8.17□□□□□ -1.1
HIF1A-208ENST00000556237 ZNF837Q96EG3 531 aaPredicted RBP8.17□□□□□ -1.1
HIF1A-208ENST00000556237 IFT57Q9NWB7 429 aa8.17□□□□□ -1.1
HIF1A-208ENST00000556237 RNF123Q5XPI4 1314 aa8.17□□□□□ -1.1
HIF1A-208ENST00000556237 ROBO1Q9Y6N7 1651 aa8.17□□□□□ -1.1
HIF1A-208ENST00000556237 PLIN1O60240 522 aa8.16□□□□□ -1.1
HIF1A-208ENST00000556237 BCAR3O75815 825 aa8.16□□□□□ -1.1
HIF1A-208ENST00000556237 RHOQP17081 205 aa8.16□□□□□ -1.1
HIF1A-208ENST00000556237 RRP1P56182 461 aaKnown RBP8.16□□□□□ -1.1
HIF1A-208ENST00000556237 AKAP4Q5JQC9 854 aa8.16□□□□□ -1.1
HIF1A-208ENST00000556237 C1orf141Q5JVX7 400 aa8.16□□□□□ -1.1
HIF1A-208ENST00000556237 NHSL1Q5SYE7 1610 aa8.16□□□□□ -1.1
HIF1A-208ENST00000556237 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.16□□□□□ -1.1
HIF1A-208ENST00000556237 IL17REQ8NFR9 667 aa8.16□□□□□ -1.1
HIF1A-208ENST00000556237 CARD10Q9BWT7 1032 aa8.16□□□□□ -1.1
HIF1A-208ENST00000556237 FANCIQ9NVI1 1328 aa8.16□□□□□ -1.1
HIF1A-208ENST00000556237 BTG4Q9NY30 223 aa8.16□□□□□ -1.1
HIF1A-208ENST00000556237 SPG7Q9UQ90 795 aa8.16□□□□□ -1.1
HIF1A-208ENST00000556237 RGPD1P0DJD0 1748 aa8.15□□□□□ -1.1
HIF1A-208ENST00000556237 WDR17Q8IZU2 1322 aa8.15□□□□□ -1.1
HIF1A-208ENST00000556237 PHF20L1A8MW92 1017 aa8.15□□□□□ -1.1
HIF1A-208ENST00000556237 ATP5J2-PTCD1G3V325 749 aa8.15□□□□□ -1.1
HIF1A-208ENST00000556237 APBB1O00213 710 aa8.15□□□□□ -1.1
HIF1A-208ENST00000556237 CHL1O00533 1208 aa8.15□□□□□ -1.1
HIF1A-208ENST00000556237 GPC1P35052 558 aa8.15□□□□□ -1.1
HIF1A-208ENST00000556237 RARSP54136 660 aaKnown RBP8.15□□□□□ -1.1
HIF1A-208ENST00000556237 TAF7Q15545 349 aaPredicted RBP8.15□□□□□ -1.1
HIF1A-208ENST00000556237 LARP1Q6PKG0 1096 aaKnown RBP8.15□□□□□ -1.1
HIF1A-208ENST00000556237 CLUAP1Q96AJ1 413 aa8.15□□□□□ -1.1
HIF1A-208ENST00000556237 LGR6Q9HBX8 967 aa8.15□□□□□ -1.1
HIF1A-208ENST00000556237 MIS18AQ9NYP9 233 aa8.15□□□□□ -1.1
HIF1A-208ENST00000556237 AHDC1Q5TGY3 1603 aaPredicted RBP8.14□□□□□ -1.11
HIF1A-208ENST00000556237 PHRF1Q9P1Y6 1649 aaKnown RBP8.14□□□□□ -1.11
HIF1A-208ENST00000556237 ZBBXA8MT70 800 aa8.14□□□□□ -1.11
HIF1A-208ENST00000556237 ELL2O00472 640 aaPredicted RBP8.14□□□□□ -1.11
HIF1A-208ENST00000556237 RNMTO43148 476 aaKnown RBP8.14□□□□□ -1.11
HIF1A-208ENST00000556237 VAMP4O75379 141 aa8.14□□□□□ -1.11
HIF1A-208ENST00000556237 CT47B1P0C2W7 299 aaPredicted RBP8.14□□□□□ -1.11
HIF1A-208ENST00000556237 ABL2P42684 1182 aa8.14□□□□□ -1.11
HIF1A-208ENST00000556237 ERICH6BQ5W0A0 696 aa8.14□□□□□ -1.11
HIF1A-208ENST00000556237 MPRIPQ6WCQ1 1025 aa8.14□□□□□ -1.11
HIF1A-208ENST00000556237 USP35Q9P2H5 1018 aa8.14□□□□□ -1.11
HIF1A-208ENST00000556237 COL18A1P39060 1754 aa8.14□□□□□ -1.11
HIF1A-208ENST00000556237 RGPD5Q99666 1765 aa8.14□□□□□ -1.11
HIF1A-208ENST00000556237 CAMTA1Q9Y6Y1 1673 aa8.14□□□□□ -1.11
HIF1A-208ENST00000556237 MAP3K5Q99683 1374 aa8.13□□□□□ -1.11
HIF1A-208ENST00000556237 H7C1W4 665 aa8.13□□□□□ -1.11
HIF1A-208ENST00000556237 GPR25O00155 361 aa8.13□□□□□ -1.11
HIF1A-208ENST00000556237 MEN1O00255 615 aa8.13□□□□□ -1.11
HIF1A-208ENST00000556237 NR1H3Q13133 447 aa8.13□□□□□ -1.11
HIF1A-208ENST00000556237 RIPOR1Q6ZS17 1223 aa8.13□□□□□ -1.11
HIF1A-208ENST00000556237 IFNL2Q8IZJ0 200 aa8.13□□□□□ -1.11
HIF1A-208ENST00000556237 C8orf58Q8NAV2 365 aa8.13□□□□□ -1.11
HIF1A-208ENST00000556237 ZCRB1Q8TBF4 217 aaKnown RBP8.13□□□□□ -1.11
HIF1A-208ENST00000556237 TSPYL4Q9UJ04 414 aa8.13□□□□□ -1.11
HIF1A-208ENST00000556237 RGPD2P0DJD1 1756 aa8.12□□□□□ -1.11
HIF1A-208ENST00000556237 PHLPP1O60346 1717 aa8.12□□□□□ -1.11
HIF1A-208ENST00000556237 BCRP11274 1271 aa8.12□□□□□ -1.11
HIF1A-208ENST00000556237 IL2RBP14784 551 aa8.12□□□□□ -1.11
HIF1A-208ENST00000556237 CANXP27824 592 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms