RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 FPGT-TNNI3KV9GXZ4 949 aa14.16□□□□□ -0.14
GABRB3-210ENST00000556166 KDM2BQ8NHM5 1336 aa14.15□□□□□ -0.14
GABRB3-210ENST00000556166 A0A1B0GUL7 405 aa14.15□□□□□ -0.14
GABRB3-210ENST00000556166 GYG1P46976 350 aa14.15□□□□□ -0.14
GABRB3-210ENST00000556166 DOK7Q18PE1 504 aa14.15□□□□□ -0.14
GABRB3-210ENST00000556166 C16orf71Q8IYS4 520 aaPredicted RBP14.15□□□□□ -0.14
GABRB3-210ENST00000556166 SUPT20HQ8NEM7 779 aa14.15□□□□□ -0.14
GABRB3-210ENST00000556166 LRRCC1Q9C099 1032 aa14.15□□□□□ -0.14
GABRB3-210ENST00000556166 BCL11AQ9H165 835 aa14.15□□□□□ -0.14
GABRB3-210ENST00000556166 PPP4R2Q9NY27 417 aa14.15□□□□□ -0.14
GABRB3-210ENST00000556166 TLR7Q9NYK1 1049 aaKnown RBP14.15□□□□□ -0.14
GABRB3-210ENST00000556166 ARFGEF1Q9Y6D6 1849 aa14.15□□□□□ -0.14
GABRB3-210ENST00000556166 IARSP41252 1262 aaKnown RBP14.14□□□□□ -0.15
GABRB3-210ENST00000556166 BCAMP50895 628 aa14.14□□□□□ -0.15
GABRB3-210ENST00000556166 ANKRD45Q5TZF3 282 aa14.14□□□□□ -0.15
GABRB3-210ENST00000556166 FBXO33Q7Z6M2 555 aa14.14□□□□□ -0.15
GABRB3-210ENST00000556166 XAGE2Q96GT9 111 aa14.14□□□□□ -0.15
GABRB3-210ENST00000556166 ZC3H12CQ9C0D7 883 aaKnown RBP14.14□□□□□ -0.15
GABRB3-210ENST00000556166 CCDC8Q9H0W5 538 aaPredicted RBP14.14□□□□□ -0.15
GABRB3-210ENST00000556166 AKAP2Q9Y2D5 859 aa14.14□□□□□ -0.15
GABRB3-210ENST00000556166 COL4A5P29400 1685 aa14.14□□□□□ -0.15
GABRB3-210ENST00000556166 PPIP5K2O43314 1243 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 SLC5A1P13866 664 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 NUCB1Q02818 461 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 AACSQ86V21 672 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 CCDC136Q96JN2 1154 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 NEUROD6Q96NK8 337 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 EYA3Q99504 573 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 DBNDD2Q9BQY9 259 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 KCNQ5Q9NR82 932 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 DBNLQ9UJU6 430 aaKnown RBP14.13□□□□□ -0.15
GABRB3-210ENST00000556166 FER1L6Q2WGJ9 1857 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 MED23Q9ULK4 1368 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 IFIT1P09914 478 aaKnown RBP14.13□□□□□ -0.15
GABRB3-210ENST00000556166 LMNB1P20700 586 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 C9orf131Q5VYM1 1079 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 LARGE2Q8N3Y3 721 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 OTUD7AQ8TE49 926 aaPredicted RBP14.13□□□□□ -0.15
GABRB3-210ENST00000556166 VPS33BQ9H267 617 aa14.13□□□□□ -0.15
GABRB3-210ENST00000556166 ZNF609O15014 1411 aa14.12□□□□□ -0.15
GABRB3-210ENST00000556166 YDJCA8MPS7 323 aa14.12□□□□□ -0.15
GABRB3-210ENST00000556166 PHKA1P46020 1223 aa14.12□□□□□ -0.15
GABRB3-210ENST00000556166 CLASRPQ8N2M8 674 aaKnown RBP14.12□□□□□ -0.15
GABRB3-210ENST00000556166 DBNDD1Q9H9R9 158 aa14.12□□□□□ -0.15
GABRB3-210ENST00000556166 HIBADHP31937 336 aaKnown RBP14.11□□□□□ -0.15
GABRB3-210ENST00000556166 LNPKQ9C0E8 428 aa14.11□□□□□ -0.15
GABRB3-210ENST00000556166 CD209Q9NNX6 404 aa14.11□□□□□ -0.15
GABRB3-210ENST00000556166 RNF181Q9P0P0 153 aa14.11□□□□□ -0.15
GABRB3-210ENST00000556166 A0A1B0GUL6 1792 aa14.11□□□□□ -0.15
GABRB3-210ENST00000556166 ECE2O60344 883 aa14.1□□□□□ -0.15
GABRB3-210ENST00000556166 CCDC102BQ68D86 513 aa14.1□□□□□ -0.15
GABRB3-210ENST00000556166 CHD1LQ86WJ1 897 aa14.1□□□□□ -0.15
GABRB3-210ENST00000556166 TDRD7Q8NHU6 1098 aaKnown RBP14.1□□□□□ -0.15
GABRB3-210ENST00000556166 COA1Q9GZY4 146 aa14.1□□□□□ -0.15
GABRB3-210ENST00000556166 IQSEC3Q9UPP2 1182 aaPredicted RBP14.1□□□□□ -0.15
GABRB3-210ENST00000556166 FZD9O00144 591 aa14.09□□□□□ -0.15
GABRB3-210ENST00000556166 IL1R1P14778 569 aa14.09□□□□□ -0.15
GABRB3-210ENST00000556166 CENPQQ7L2Z9 268 aaPredicted RBP14.09□□□□□ -0.15
GABRB3-210ENST00000556166 SKAP1Q86WV1 359 aa14.09□□□□□ -0.15
GABRB3-210ENST00000556166 ZNRF3Q9ULT6 936 aa14.09□□□□□ -0.15
GABRB3-210ENST00000556166 DCAF8L1A6NGE4 600 aa14.09□□□□□ -0.15
GABRB3-210ENST00000556166 IFIT2P09913 472 aaKnown RBP14.09□□□□□ -0.15
GABRB3-210ENST00000556166 PDE4AP27815 886 aa14.09□□□□□ -0.15
GABRB3-210ENST00000556166 SCARF1Q14162 830 aa14.09□□□□□ -0.15
GABRB3-210ENST00000556166 CAVIN4Q5BKX8 364 aa14.09□□□□□ -0.15
GABRB3-210ENST00000556166 ZNF804AQ7Z570 1209 aa14.09□□□□□ -0.15
GABRB3-210ENST00000556166 NIM1KQ8IY84 436 aa14.09□□□□□ -0.15
GABRB3-210ENST00000556166 SALL3Q9BXA9 1300 aa14.08□□□□□ -0.15
GABRB3-210ENST00000556166 CXCL9Q07325 125 aa14.08□□□□□ -0.16
GABRB3-210ENST00000556166 TSHZ3Q63HK5 1081 aa14.08□□□□□ -0.16
GABRB3-210ENST00000556166 PODNQ7Z5L7 613 aa14.08□□□□□ -0.16
GABRB3-210ENST00000556166 JDP2Q8WYK2 163 aa14.08□□□□□ -0.16
GABRB3-210ENST00000556166 RAD17O75943 681 aa14.07□□□□□ -0.16
GABRB3-210ENST00000556166 GORABQ5T7V8 394 aa14.07□□□□□ -0.16
GABRB3-210ENST00000556166 PI16Q6UXB8 463 aa14.07□□□□□ -0.16
GABRB3-210ENST00000556166 VPS37DQ86XT2 251 aa14.07□□□□□ -0.16
GABRB3-210ENST00000556166 MXD3Q9BW11 206 aa14.07□□□□□ -0.16
GABRB3-210ENST00000556166 JAG2Q9Y219 1238 aa14.07□□□□□ -0.16
GABRB3-210ENST00000556166 ZNF541Q9H0D2 1346 aa14.07□□□□□ -0.16
GABRB3-210ENST00000556166 G3V3G9 751 aa14.06□□□□□ -0.16
GABRB3-210ENST00000556166 ARID4AP29374 1257 aaPredicted RBP14.06□□□□□ -0.16
GABRB3-210ENST00000556166 RASGRF1Q13972 1273 aa14.06□□□□□ -0.16
GABRB3-210ENST00000556166 DCAF8Q5TAQ9 597 aa14.06□□□□□ -0.16
GABRB3-210ENST00000556166 ZBTB22O15209 634 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 MCAMP43121 646 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 GTF2IP78347 998 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 PLEKHM2Q8IWE5 1019 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 ZNF512BQ96KM6 892 aaPredicted RBP14.05□□□□□ -0.16
GABRB3-210ENST00000556166 SNRKQ9NRH2 765 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 HMG20BQ9P0W2 317 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 STAP2Q9UGK3 403 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 NDUFB9Q9Y6M9 179 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 COL1A1P02452 1464 aaPredicted RBP14.05□□□□□ -0.16
GABRB3-210ENST00000556166 SBF1O95248 1867 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 PSMD14O00487 310 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 VIL1P09327 827 aaKnown RBP14.05□□□□□ -0.16
GABRB3-210ENST00000556166 ATP5JP18859 108 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 CCDC158Q5M9N0 1113 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 TTC39AQ5SRH9 613 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 DACT2Q5SW24 774 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms