RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 HMGB1P09429 215 aaKnown RBP12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 HSPD1P10809 573 aaKnown RBP12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 GTF2E1P29083 439 aaPredicted RBP12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 ARID4AP29374 1257 aaPredicted RBP12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 WASHC4Q2M389 1173 aa12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 SEPT12Q8IYM1 358 aa12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 NYXQ9GZU5 481 aa12.04□□□□□ -0.48
EFCAB11-209ENST00000556005 ATRNO75882 1429 aa12.03□□□□□ -0.48
EFCAB11-209ENST00000556005 NHSQ6T4R5 1651 aa12.03□□□□□ -0.48
EFCAB11-209ENST00000556005 MAST3O60307 1309 aa12.03□□□□□ -0.48
EFCAB11-209ENST00000556005 SF3B3Q15393 1217 aaKnown RBP12.03□□□□□ -0.48
EFCAB11-209ENST00000556005 ERFEQ4G0M1 354 aa12.03□□□□□ -0.48
EFCAB11-209ENST00000556005 HELBQ8NG08 1087 aaPredicted RBP12.03□□□□□ -0.48
EFCAB11-209ENST00000556005 APPBP2Q92624 585 aa12.03□□□□□ -0.48
EFCAB11-209ENST00000556005 OSBP2Q969R2 916 aa12.03□□□□□ -0.48
EFCAB11-209ENST00000556005 SETDB2Q96T68 719 aa12.03□□□□□ -0.48
EFCAB11-209ENST00000556005 LARP6Q9BRS8 491 aaKnown RBP12.03□□□□□ -0.48
EFCAB11-209ENST00000556005 LRP5O75197 1615 aa12.03□□□□□ -0.48
EFCAB11-209ENST00000556005 BCORQ6W2J9 1755 aa12.03□□□□□ -0.48
EFCAB11-209ENST00000556005 BTAF1O14981 1849 aa12.02□□□□□ -0.48
EFCAB11-209ENST00000556005 SLFNL1Q499Z3 407 aa12.02□□□□□ -0.48
EFCAB11-209ENST00000556005 SLC10A5Q5PT55 438 aa12.02□□□□□ -0.48
EFCAB11-209ENST00000556005 TBC1D9BQ66K14 1250 aa12.02□□□□□ -0.48
EFCAB11-209ENST00000556005 MCTP1Q6DN14 999 aa12.02□□□□□ -0.48
EFCAB11-209ENST00000556005 BICDL1Q6ZP65 573 aa12.02□□□□□ -0.48
EFCAB11-209ENST00000556005 SMC3Q9UQE7 1217 aa12.02□□□□□ -0.48
EFCAB11-209ENST00000556005 WDR33Q9C0J8 1336 aaKnown RBP12.02□□□□□ -0.49
EFCAB11-209ENST00000556005 M0R2C6 588 aa12.02□□□□□ -0.49
EFCAB11-209ENST00000556005 PHKA1P46020 1223 aa12.02□□□□□ -0.49
EFCAB11-209ENST00000556005 PI16Q6UXB8 463 aa12.02□□□□□ -0.49
EFCAB11-209ENST00000556005 ANKRD18AQ8IVF6 992 aa12.02□□□□□ -0.49
EFCAB11-209ENST00000556005 BCL11BQ9C0K0 894 aaPredicted RBP12.02□□□□□ -0.49
EFCAB11-209ENST00000556005 QTRT2Q9H974 415 aaKnown RBP12.02□□□□□ -0.49
EFCAB11-209ENST00000556005 BCL2L12Q9HB09 334 aa12.02□□□□□ -0.49
EFCAB11-209ENST00000556005 CTNNA3Q9UI47 895 aa12.02□□□□□ -0.49
EFCAB11-209ENST00000556005 TAF6LQ9Y6J9 622 aa12.02□□□□□ -0.49
EFCAB11-209ENST00000556005 DDX60Q8IY21 1712 aaKnown RBP12.01□□□□□ -0.49
EFCAB11-209ENST00000556005 PDIA4P13667 645 aaKnown RBP12.01□□□□□ -0.49
EFCAB11-209ENST00000556005 CHRNDQ07001 517 aa12.01□□□□□ -0.49
EFCAB11-209ENST00000556005 ME3Q16798 604 aa12.01□□□□□ -0.49
EFCAB11-209ENST00000556005 TPTE2Q6XPS3 522 aa12.01□□□□□ -0.49
EFCAB11-209ENST00000556005 CCDC83Q8IWF9 413 aa12.01□□□□□ -0.49
EFCAB11-209ENST00000556005 ARHGEF1Q92888 912 aaKnown RBP12.01□□□□□ -0.49
EFCAB11-209ENST00000556005 TPCN1Q9ULQ1 816 aa12.01□□□□□ -0.49
EFCAB11-209ENST00000556005 LARGE1O95461 756 aa12□□□□□ -0.49
EFCAB11-209ENST00000556005 RFC4P35249 363 aa12□□□□□ -0.49
EFCAB11-209ENST00000556005 ADD2P35612 726 aa12□□□□□ -0.49
EFCAB11-209ENST00000556005 UBE3CQ15386 1083 aa12□□□□□ -0.49
EFCAB11-209ENST00000556005 TRAPPC3LQ5T215 181 aa12□□□□□ -0.49
EFCAB11-209ENST00000556005 SLC9C2Q5TAH2 1124 aa12□□□□□ -0.49
EFCAB11-209ENST00000556005 NBPF5PQ86XG9 351 aaPredicted RBP12□□□□□ -0.49
EFCAB11-209ENST00000556005 SPATA5Q8NB90 893 aa12□□□□□ -0.49
EFCAB11-209ENST00000556005 NLRP3Q96P20 1036 aa12□□□□□ -0.49
EFCAB11-209ENST00000556005 BSDC1Q9NW68 430 aaPredicted RBP12□□□□□ -0.49
EFCAB11-209ENST00000556005 LAMB2P55268 1798 aa12□□□□□ -0.49
EFCAB11-209ENST00000556005 TOB2Q14106 344 aaPredicted RBP12□□□□□ -0.49
EFCAB11-209ENST00000556005 DHX32Q7L7V1 743 aaKnown RBP12□□□□□ -0.49
EFCAB11-209ENST00000556005 PUS7LQ9H0K6 701 aaKnown RBP12□□□□□ -0.49
EFCAB11-209ENST00000556005 GZF1Q9H116 711 aaPredicted RBP12□□□□□ -0.49
EFCAB11-209ENST00000556005 SRP68Q9UHB9 627 aaKnown RBP12□□□□□ -0.49
EFCAB11-209ENST00000556005 IDH1O75874 414 aaKnown RBP11.99□□□□□ -0.49
EFCAB11-209ENST00000556005 GJB2P29033 226 aa11.99□□□□□ -0.49
EFCAB11-209ENST00000556005 IMMTQ16891 758 aaKnown RBP11.99□□□□□ -0.49
EFCAB11-209ENST00000556005 FOXD4L5Q5VV16 416 aaPredicted RBP11.99□□□□□ -0.49
EFCAB11-209ENST00000556005 SMIM5Q71RC9 77 aa11.99□□□□□ -0.49
EFCAB11-209ENST00000556005 FOXD4L4Q8WXT5 416 aaPredicted RBP11.99□□□□□ -0.49
EFCAB11-209ENST00000556005 TCEANC2Q96MN5 208 aa11.99□□□□□ -0.49
EFCAB11-209ENST00000556005 DDX49Q9Y6V7 483 aaKnown RBP11.99□□□□□ -0.49
EFCAB11-209ENST00000556005 SCN7AQ01118 1682 aa11.98□□□□□ -0.49
EFCAB11-209ENST00000556005 E7EWF7 191 aa11.98□□□□□ -0.49
EFCAB11-209ENST00000556005 GPAA1O43292 621 aa11.98□□□□□ -0.49
EFCAB11-209ENST00000556005 STX6O43752 255 aa11.98□□□□□ -0.49
EFCAB11-209ENST00000556005 SYT1P21579 422 aa11.98□□□□□ -0.49
EFCAB11-209ENST00000556005 FGD1P98174 961 aa11.98□□□□□ -0.49
EFCAB11-209ENST00000556005 MAP3K12Q12852 859 aa11.98□□□□□ -0.49
EFCAB11-209ENST00000556005 KLHL40Q2TBA0 621 aa11.98□□□□□ -0.49
EFCAB11-209ENST00000556005 FAM196AQ6ZSG2 479 aa11.98□□□□□ -0.49
EFCAB11-209ENST00000556005 Q6ZUG5 572 aa11.98□□□□□ -0.49
EFCAB11-209ENST00000556005 PIH1D3Q9NQM4 214 aaKnown RBP11.98□□□□□ -0.49
EFCAB11-209ENST00000556005 LMBRD1Q9NUN5 540 aa11.98□□□□□ -0.49
EFCAB11-209ENST00000556005 SNAP23O00161 211 aa11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 FGAP02671 866 aa11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 RASGRF1Q13972 1273 aa11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 COL9A3Q14050 684 aaPredicted RBP11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 UBE4AQ14139 1066 aa11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 C3orf67Q6ZVT6 689 aa11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 NECAB1Q8N987 351 aa11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 ATP6V1DQ9Y5K8 247 aa11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 LY75O60449 1722 aa11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 AKAP11Q9UKA4 1901 aa11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 NPHP1O15259 732 aa11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 PRPF40AO75400 957 aaKnown RBP11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 ZSCAN22P10073 491 aaPredicted RBP11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 HMGB2P26583 209 aaKnown RBP11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 BCAMP50895 628 aa11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 STOX1Q6ZVD7 989 aa11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 GNL3LQ9NVN8 582 aaKnown RBP11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 ZNF532Q9HCE3 1301 aa11.97□□□□□ -0.49
EFCAB11-209ENST00000556005 SBF2Q86WG5 1849 aa11.96□□□□□ -0.49
EFCAB11-209ENST00000556005 ARAP2Q8WZ64 1704 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms