RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 FBXO24O75426 580 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 THBS1P07996 1170 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 NFKB1P19838 968 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 ITPKAP23677 461 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 LIG3P49916 1009 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 SPEM2Q0P670 501 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 NFX1Q12986 1120 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 COL9A2Q14055 689 aaPredicted RBP4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 UBAP2LQ14157 1087 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 NFE2L2Q16236 605 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 MAP3K11Q16584 847 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 COL13A1Q5TAT6 717 aaPredicted RBP4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 TPTE2Q6XPS3 522 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 CEP120Q8N960 986 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 PHC3Q8NDX5 983 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 EAF1Q96JC9 268 aaPredicted RBP4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 RHOVQ96L33 236 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 NT5C1AQ9BXI3 368 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 STRN4Q9NRL3 753 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 MARK1Q9P0L2 795 aa4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 SUPT16HQ9Y5B9 1047 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-212ENST00000555858 ANKRD62A6NC57 917 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 AXIN1O15169 862 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 GREM1O60565 184 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 ACPPP15309 386 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 GRIA4P48058 902 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 SOX9P48436 509 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 NRLP54845 237 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 LMNB2Q03252 620 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 RPS26P11Q5JNZ5 115 aaPredicted RBP4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 ZNF746Q6NUN9 644 aaPredicted RBP4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 FBXL19Q6PCT2 694 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 DHX32Q7L7V1 743 aaKnown RBP4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 TMEM102Q8N9M5 508 aaPredicted RBP4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 BHMTQ93088 406 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 SPACA7Q96KW9 195 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 BHLHE41Q9C0J9 482 aaPredicted RBP4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 ZNF408Q9H9D4 720 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 GINM1Q9NU53 330 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 NDFIP2Q9NV92 336 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 DZANK1Q9NVP4 752 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 EFR3BQ9Y2G0 817 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 TBX22Q9Y458 520 aa4.44□□□□□ -1.7
MTHFD1-212ENST00000555858 A0A096LPE4 126 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 A0A1W2PPZ6 126 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 SLC35F4A4IF30 521 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 PPM1GO15355 546 aaPredicted RBP4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 BNIP3LO60238 219 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 DGAT1O75907 488 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 RGS20O76081 388 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 PF4P02776 101 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 CELA3AP09093 270 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 GARTP22102 1010 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 RPS26P62854 115 aaKnown RBP4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 FAM160A1Q05DH4 1040 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 CAMK2GQ13555 558 aaPredicted RBP4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 NEUROD1Q13562 356 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 BMS1Q14692 1282 aaKnown RBP4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 SNAP47Q5SQN1 464 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 SDE2Q6IQ49 451 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 AGMOQ6ZNB7 445 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 TRIM22Q8IYM9 498 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 CRIPAKQ8N1N5 446 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 MKL1Q969V6 931 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 NXPE3Q969Y0 559 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 MRFAP1L1Q96HT8 127 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 GMCL1Q96IK5 515 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 NSUN5Q96P11 429 aaKnown RBP4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 NECAB3Q96P71 396 aaPredicted RBP4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 SLC30A3Q99726 388 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 TLR6Q9Y2C9 796 aa4.43□□□□□ -1.7
MTHFD1-212ENST00000555858 METTL12A8MUP2 240 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 K7ELQ4 463 aaPredicted RBP4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 NFKBIEO00221 500 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 ENC1O14682 589 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 TRPA1O75762 1119 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 CD33P20138 364 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 GPLD1P80108 840 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 PTSQ03393 145 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 APOBRQ0VD83 1088 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 SERINC3Q13530 473 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 GRIN2CQ14957 1233 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 SPRED3Q2MJR0 410 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 PKDCCQ504Y2 493 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 FAM182BQ5T319 152 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 TTBK2Q6IQ55 1244 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 GOLM1Q8NBJ4 401 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 TRPM4Q8TD43 1214 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 CPLX3Q8WVH0 158 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 NKD1Q969G9 470 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 ABHD17AQ96GS6 310 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 ZNF576Q9H609 170 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 SEC31BQ9NQW1 1179 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 UBP1Q9NZI7 540 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 SIRPGQ9P1W8 387 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 HCN2Q9UL51 889 aa4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 ATXN7L1Q9ULK2 861 aaPredicted RBP4.42□□□□□ -1.7
MTHFD1-212ENST00000555858 ROBO2Q9HCK4 1378 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 LOC102724428A0A0B4J2F2 783 aa4.41□□□□□ -1.7
MTHFD1-212ENST00000555858 PDE2AO00408 941 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms