RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 EAPPQ56P03 285 aaPredicted RBP28.48■■■□□ 2.15
CDKN3-208ENST00000555837 CHADLQ6NUI6 762 aa28.48■■■□□ 2.15
CDKN3-208ENST00000555837 AGBL3Q8NEM8 1001 aa28.48■■■□□ 2.15
CDKN3-208ENST00000555837 CLEC11AQ9Y240 323 aa28.48■■■□□ 2.15
CDKN3-208ENST00000555837 CIAO1O76071 339 aa28.47■■■□□ 2.15
CDKN3-208ENST00000555837 VIL1P09327 827 aaKnown RBP28.47■■■□□ 2.15
CDKN3-208ENST00000555837 HELBQ8NG08 1087 aaPredicted RBP28.47■■■□□ 2.15
CDKN3-208ENST00000555837 PDE8BO95263 885 aa28.46■■■□□ 2.15
CDKN3-208ENST00000555837 SRGAP3O43295 1099 aa28.45■■■□□ 2.14
CDKN3-208ENST00000555837 HSPA6P17066 643 aa28.45■■■□□ 2.14
CDKN3-208ENST00000555837 PTPN12Q05209 780 aaKnown RBP28.45■■■□□ 2.14
CDKN3-208ENST00000555837 CAVIN4Q5BKX8 364 aa28.45■■■□□ 2.14
CDKN3-208ENST00000555837 STRIP1Q5VSL9 837 aa28.45■■■□□ 2.14
CDKN3-208ENST00000555837 CNOT7Q9UIV1 285 aaKnown RBP28.45■■■□□ 2.14
CDKN3-208ENST00000555837 IL15P40933 162 aaPredicted RBP28.44■■■□□ 2.14
CDKN3-208ENST00000555837 RSBN1LQ6PCB5 846 aaPredicted RBP28.44■■■□□ 2.14
CDKN3-208ENST00000555837 VPS37DQ86XT2 251 aa28.44■■■□□ 2.14
CDKN3-208ENST00000555837 YTHDC1Q96MU7 727 aaKnown RBP28.44■■■□□ 2.14
CDKN3-208ENST00000555837 COPRSQ9NQ92 184 aa28.44■■■□□ 2.14
CDKN3-208ENST00000555837 ZNF609O15014 1411 aa28.43■■■□□ 2.14
CDKN3-208ENST00000555837 IFIT1P09914 478 aaKnown RBP28.43■■■□□ 2.14
CDKN3-208ENST00000555837 RFX5P48382 616 aaPredicted RBP28.43■■■□□ 2.14
CDKN3-208ENST00000555837 PUM3Q15397 648 aaKnown RBP28.43■■■□□ 2.14
CDKN3-208ENST00000555837 PUS3Q9BZE2 481 aaKnown RBP28.43■■■□□ 2.14
CDKN3-208ENST00000555837 CEP126Q9P2H0 1117 aa28.43■■■□□ 2.14
CDKN3-208ENST00000555837 DDX19BQ9UMR2 479 aa28.43■■■□□ 2.14
CDKN3-208ENST00000555837 EPS15P42566 896 aa28.42■■■□□ 2.14
CDKN3-208ENST00000555837 APLP1P51693 650 aa28.42■■■□□ 2.14
CDKN3-208ENST00000555837 PDE3AQ14432 1141 aa28.42■■■□□ 2.14
CDKN3-208ENST00000555837 LRRC24Q50LG9 513 aa28.42■■■□□ 2.14
CDKN3-208ENST00000555837 OGFOD1Q8N543 542 aa28.42■■■□□ 2.14
CDKN3-208ENST00000555837 ZC3H15Q8WU90 426 aaKnown RBP28.42■■■□□ 2.14
CDKN3-208ENST00000555837 CD209Q9NNX6 404 aa28.42■■■□□ 2.14
CDKN3-208ENST00000555837 TTLL5Q6EMB2 1281 aa28.41■■■□□ 2.14
CDKN3-208ENST00000555837 TNNQ9UQP3 1299 aa28.41■■■□□ 2.14
CDKN3-208ENST00000555837 ZBTB7BO15156 539 aaPredicted RBP28.4■■■□□ 2.14
CDKN3-208ENST00000555837 HIBADHP31937 336 aaKnown RBP28.4■■■□□ 2.14
CDKN3-208ENST00000555837 MICALL2Q8IY33 904 aa28.4■■■□□ 2.14
CDKN3-208ENST00000555837 FBXW7Q969H0 707 aa28.4■■■□□ 2.14
CDKN3-208ENST00000555837 SLC5A1P13866 664 aa28.39■■■□□ 2.14
CDKN3-208ENST00000555837 IL1R1P14778 569 aa28.39■■■□□ 2.14
CDKN3-208ENST00000555837 KLHDC4Q8TBB5 520 aa28.39■■■□□ 2.14
CDKN3-208ENST00000555837 ZBTB12Q9Y330 459 aaPredicted RBP28.39■■■□□ 2.14
CDKN3-208ENST00000555837 MVPQ14764 893 aaKnown RBP28.38■■■□□ 2.13
CDKN3-208ENST00000555837 TXNRD3Q86VQ6 643 aa28.38■■■□□ 2.13
CDKN3-208ENST00000555837 LPIN2Q92539 896 aa28.38■■■□□ 2.13
CDKN3-208ENST00000555837 HDAC9Q9UKV0 1011 aa28.38■■■□□ 2.13
CDKN3-208ENST00000555837 AKAP2Q9Y2D5 859 aa28.38■■■□□ 2.13
CDKN3-208ENST00000555837 USP17L8P0C7I0 530 aa28.37■■■□□ 2.13
CDKN3-208ENST00000555837 RLBP1P12271 317 aa28.37■■■□□ 2.13
CDKN3-208ENST00000555837 FKBP1AP62942 108 aaKnown RBP28.37■■■□□ 2.13
CDKN3-208ENST00000555837 G3BP1Q13283 466 aaKnown RBP eCLIP28.37■■■□□ 2.13
CDKN3-208ENST00000555837 SIL1Q9H173 461 aa28.37■■■□□ 2.13
CDKN3-208ENST00000555837 KCNQ5Q9NR82 932 aa28.37■■■□□ 2.13
CDKN3-208ENST00000555837 A0A1B0GUL6 1792 aa28.37■■■□□ 2.13
CDKN3-208ENST00000555837 WTIPA6NIX2 430 aaPredicted RBP28.36■■■□□ 2.13
CDKN3-208ENST00000555837 FRAT2O75474 233 aaPredicted RBP28.36■■■□□ 2.13
CDKN3-208ENST00000555837 SASH1O94885 1247 aa28.36■■■□□ 2.13
CDKN3-208ENST00000555837 VGLL2Q8N8G2 317 aa28.36■■■□□ 2.13
CDKN3-208ENST00000555837 PANK1Q8TE04 598 aa28.36■■■□□ 2.13
CDKN3-208ENST00000555837 PSME4Q14997 1843 aa28.35■■■□□ 2.13
CDKN3-208ENST00000555837 GTF2IP78347 998 aa28.35■■■□□ 2.13
CDKN3-208ENST00000555837 DACT2Q5SW24 774 aa28.35■■■□□ 2.13
CDKN3-208ENST00000555837 IRS2Q9Y4H2 1338 aa28.35■■■□□ 2.13
CDKN3-208ENST00000555837 KLRK1P26718 216 aa28.34■■■□□ 2.13
CDKN3-208ENST00000555837 ATP8B2P98198 1209 aa28.34■■■□□ 2.13
CDKN3-208ENST00000555837 ATG9AQ7Z3C6 839 aa28.34■■■□□ 2.13
CDKN3-208ENST00000555837 GNL3LQ9NVN8 582 aaKnown RBP28.34■■■□□ 2.13
CDKN3-208ENST00000555837 SNAP23O00161 211 aa28.33■■■□□ 2.13
CDKN3-208ENST00000555837 ATP2B3Q16720 1220 aa28.33■■■□□ 2.13
CDKN3-208ENST00000555837 CNTROBQ8N137 903 aa28.33■■■□□ 2.13
CDKN3-208ENST00000555837 FAM84BQ96KN1 310 aaPredicted RBP28.33■■■□□ 2.13
CDKN3-208ENST00000555837 ZNF280AP59817 542 aaPredicted RBP28.32■■■□□ 2.12
CDKN3-208ENST00000555837 TDRD7Q8NHU6 1098 aaKnown RBP28.32■■■□□ 2.12
CDKN3-208ENST00000555837 TBC1D22AQ8WUA7 517 aa28.32■■■□□ 2.12
CDKN3-208ENST00000555837 GMLQ99445 158 aa28.32■■■□□ 2.12
CDKN3-208ENST00000555837 SCN9AQ15858 1988 aa28.31■■■□□ 2.12
CDKN3-208ENST00000555837 HMMRO75330 724 aa28.31■■■□□ 2.12
CDKN3-208ENST00000555837 KIF4BQ2VIQ3 1234 aa28.31■■■□□ 2.12
CDKN3-208ENST00000555837 FBXO33Q7Z6M2 555 aa28.31■■■□□ 2.12
CDKN3-208ENST00000555837 PGAP2Q9UHJ9 254 aa28.31■■■□□ 2.12
CDKN3-208ENST00000555837 FAM205AQ6ZU69 1335 aa28.3■■■□□ 2.12
CDKN3-208ENST00000555837 POTEIP0CG38 1075 aa28.3■■■□□ 2.12
CDKN3-208ENST00000555837 POTEJP0CG39 1038 aa28.3■■■□□ 2.12
CDKN3-208ENST00000555837 FGFR2P21802 821 aa28.3■■■□□ 2.12
CDKN3-208ENST00000555837 GYG1P46976 350 aa28.3■■■□□ 2.12
CDKN3-208ENST00000555837 OS9Q13438 667 aaPredicted RBP28.3■■■□□ 2.12
CDKN3-208ENST00000555837 SSH3Q8TE77 659 aa28.3■■■□□ 2.12
CDKN3-208ENST00000555837 PA2G4Q9UQ80 394 aaKnown RBP28.3■■■□□ 2.12
CDKN3-208ENST00000555837 HSP90AB4PQ58FF6 505 aa28.29■■■□□ 2.12
CDKN3-208ENST00000555837 CDC37L1Q7L3B6 337 aa28.29■■■□□ 2.12
CDKN3-208ENST00000555837 RPAP2Q8IXW5 612 aaPredicted RBP28.29■■■□□ 2.12
CDKN3-208ENST00000555837 DCPSQ96C86 337 aaKnown RBP28.29■■■□□ 2.12
CDKN3-208ENST00000555837 MYOZ2Q9NPC6 264 aa28.29■■■□□ 2.12
CDKN3-208ENST00000555837 COG6Q9Y2V7 657 aa28.29■■■□□ 2.12
CDKN3-208ENST00000555837 ADAMTSL1Q8N6G6 1762 aa28.29■■■□□ 2.12
CDKN3-208ENST00000555837 POLA2Q14181 598 aa28.28■■■□□ 2.12
CDKN3-208ENST00000555837 TBC1D10BQ4KMP7 808 aaPredicted RBP28.28■■■□□ 2.12
CDKN3-208ENST00000555837 MAP1SQ66K74 1059 aaPredicted RBP28.28■■■□□ 2.12
CDKN3-208ENST00000555837 PNMA6EA0A0J9YXQ4 647 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms