RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 CCDC24Q8N4L8 307 aa22.04■■□□□ 1.12
GABRB3-209ENST00000555632 RTCBQ9Y3I0 505 aaKnown RBP22.04■■□□□ 1.12
GABRB3-209ENST00000555632 ABCC12Q96J65 1359 aa22.04■■□□□ 1.12
GABRB3-209ENST00000555632 BAG4O95429 457 aaKnown RBP22.04■■□□□ 1.12
GABRB3-209ENST00000555632 TSGA10IPQ3SY00 556 aa22.04■■□□□ 1.12
GABRB3-209ENST00000555632 LPIN2Q92539 896 aa22.04■■□□□ 1.12
GABRB3-209ENST00000555632 TRAK2O60296 914 aa22.03■■□□□ 1.12
GABRB3-209ENST00000555632 PHF14O94880 888 aa22.03■■□□□ 1.12
GABRB3-209ENST00000555632 HSPD1P10809 573 aaKnown RBP22.03■■□□□ 1.12
GABRB3-209ENST00000555632 RTL9Q8NET4 1388 aa22.03■■□□□ 1.12
GABRB3-209ENST00000555632 WTIPA6NIX2 430 aaPredicted RBP22.03■■□□□ 1.12
GABRB3-209ENST00000555632 DDX11L8A8MPP1 907 aa22.03■■□□□ 1.12
GABRB3-209ENST00000555632 CLEC17AQ6ZS10 378 aa22.03■■□□□ 1.12
GABRB3-209ENST00000555632 HMG20BQ9P0W2 317 aa22.03■■□□□ 1.12
GABRB3-209ENST00000555632 U3KPZ7 1027 aaPredicted RBP22.03■■□□□ 1.12
GABRB3-209ENST00000555632 MYO5AQ9Y4I1 1855 aaKnown RBP22.02■■□□□ 1.12
GABRB3-209ENST00000555632 ZPR1O75312 459 aa22.02■■□□□ 1.12
GABRB3-209ENST00000555632 IGHMBP2P38935 993 aaKnown RBP22.02■■□□□ 1.12
GABRB3-209ENST00000555632 PUS7LQ9H0K6 701 aaKnown RBP22.02■■□□□ 1.12
GABRB3-209ENST00000555632 PSMA5P28066 241 aa22.01■■□□□ 1.11
GABRB3-209ENST00000555632 ST3GAL1Q11201 340 aa22.01■■□□□ 1.11
GABRB3-209ENST00000555632 WASHC4Q2M389 1173 aa22.01■■□□□ 1.11
GABRB3-209ENST00000555632 BLOC1S2Q6QNY1 142 aa22.01■■□□□ 1.11
GABRB3-209ENST00000555632 ZNF512BQ96KM6 892 aaPredicted RBP22.01■■□□□ 1.11
GABRB3-209ENST00000555632 PIH1D3Q9NQM4 214 aaKnown RBP22.01■■□□□ 1.11
GABRB3-209ENST00000555632 TPCN1Q9ULQ1 816 aa22.01■■□□□ 1.11
GABRB3-209ENST00000555632 FOXP2O15409 715 aa22.01■■□□□ 1.11
GABRB3-209ENST00000555632 RPS6KB1P23443 525 aa22.01■■□□□ 1.11
GABRB3-209ENST00000555632 ARID4AP29374 1257 aaPredicted RBP22.01■■□□□ 1.11
GABRB3-209ENST00000555632 CHRNDQ07001 517 aa22.01■■□□□ 1.11
GABRB3-209ENST00000555632 ME3Q16798 604 aa22.01■■□□□ 1.11
GABRB3-209ENST00000555632 STOX1Q6ZVD7 989 aa22.01■■□□□ 1.11
GABRB3-209ENST00000555632 IL27Q8NEV9 243 aa22.01■■□□□ 1.11
GABRB3-209ENST00000555632 CASZ1Q86V15 1759 aa22.01■■□□□ 1.11
GABRB3-209ENST00000555632 HSP90B1P14625 803 aaKnown RBP22■■□□□ 1.11
GABRB3-209ENST00000555632 GTF2E1P29083 439 aaPredicted RBP22■■□□□ 1.11
GABRB3-209ENST00000555632 FAM196AQ6ZSG2 479 aa22■■□□□ 1.11
GABRB3-209ENST00000555632 SETDB2Q96T68 719 aa22■■□□□ 1.11
GABRB3-209ENST00000555632 DSCC1Q9BVC3 393 aa22■■□□□ 1.11
GABRB3-209ENST00000555632 BCL11BQ9C0K0 894 aaPredicted RBP22■■□□□ 1.11
GABRB3-209ENST00000555632 GZF1Q9H116 711 aaPredicted RBP22■■□□□ 1.11
GABRB3-209ENST00000555632 SF3B3Q15393 1217 aaKnown RBP22■■□□□ 1.11
GABRB3-209ENST00000555632 TICAM2Q86XR7 235 aa22■■□□□ 1.11
GABRB3-209ENST00000555632 CCDC83Q8IWF9 413 aa22■■□□□ 1.11
GABRB3-209ENST00000555632 C4BP0C0L5 1744 aa21.99■■□□□ 1.11
GABRB3-209ENST00000555632 TOB2Q14106 344 aaPredicted RBP21.99■■□□□ 1.11
GABRB3-209ENST00000555632 TTLL5Q6EMB2 1281 aa21.99■■□□□ 1.11
GABRB3-209ENST00000555632 NECAB1Q8N987 351 aa21.99■■□□□ 1.11
GABRB3-209ENST00000555632 SLC5A1P13866 664 aa21.98■■□□□ 1.11
GABRB3-209ENST00000555632 BCAMP50895 628 aa21.98■■□□□ 1.11
GABRB3-209ENST00000555632 RASGRF1Q13972 1273 aa21.98■■□□□ 1.11
GABRB3-209ENST00000555632 ARAP2Q8WZ64 1704 aa21.98■■□□□ 1.11
GABRB3-209ENST00000555632 BRD1O95696 1058 aa21.98■■□□□ 1.11
GABRB3-209ENST00000555632 NBPF5PQ86XG9 351 aaPredicted RBP21.98■■□□□ 1.11
GABRB3-209ENST00000555632 CELF1Q92879 486 aaKnown RBP21.98■■□□□ 1.11
GABRB3-209ENST00000555632 NEK1Q96PY6 1258 aa21.98■■□□□ 1.11
GABRB3-209ENST00000555632 MYH7P12883 1935 aa21.97■■□□□ 1.11
GABRB3-209ENST00000555632 IDH1O75874 414 aaKnown RBP21.97■■□□□ 1.11
GABRB3-209ENST00000555632 ZFYP08048 801 aaPredicted RBP21.97■■□□□ 1.11
GABRB3-209ENST00000555632 SLC10A5Q5PT55 438 aa21.97■■□□□ 1.11
GABRB3-209ENST00000555632 MCTP1Q6DN14 999 aa21.97■■□□□ 1.11
GABRB3-209ENST00000555632 APPBP2Q92624 585 aa21.97■■□□□ 1.11
GABRB3-209ENST00000555632 CDC5LQ99459 802 aaKnown RBP21.97■■□□□ 1.11
GABRB3-209ENST00000555632 RGL2O15211 777 aa21.97■■□□□ 1.11
GABRB3-209ENST00000555632 SLC9C2Q5TAH2 1124 aa21.97■■□□□ 1.11
GABRB3-209ENST00000555632 C4AP0C0L4 1744 aa21.97■■□□□ 1.11
GABRB3-209ENST00000555632 BRWD3Q6RI45 1802 aa21.96■■□□□ 1.11
GABRB3-209ENST00000555632 RFC4P35249 363 aa21.96■■□□□ 1.11
GABRB3-209ENST00000555632 ADD2P35612 726 aa21.96■■□□□ 1.11
GABRB3-209ENST00000555632 ANKRD18AQ8IVF6 992 aa21.96■■□□□ 1.11
GABRB3-209ENST00000555632 SPATA5Q8NB90 893 aa21.96■■□□□ 1.11
GABRB3-209ENST00000555632 TRIM37O94972 964 aa21.95■■□□□ 1.11
GABRB3-209ENST00000555632 UQCRFS1P1P0C7P4 283 aa21.95■■□□□ 1.11
GABRB3-209ENST00000555632 KRT32Q14532 448 aa21.95■■□□□ 1.11
GABRB3-209ENST00000555632 TRAPPC3LQ5T215 181 aa21.95■■□□□ 1.11
GABRB3-209ENST00000555632 LRRC2Q9BYS8 371 aa21.95■■□□□ 1.11
GABRB3-209ENST00000555632 WWC3Q9ULE0 1092 aa21.95■■□□□ 1.11
GABRB3-209ENST00000555632 LRRFIP1Q32MZ4 808 aaKnown RBP21.95■■□□□ 1.1
GABRB3-209ENST00000555632 COL24A1Q17RW2 1714 aa21.95■■□□□ 1.1
GABRB3-209ENST00000555632 GPAA1O43292 621 aa21.94■■□□□ 1.1
GABRB3-209ENST00000555632 KRT27Q7Z3Y8 459 aa21.94■■□□□ 1.1
GABRB3-209ENST00000555632 ZSCAN31Q96LW9 406 aaPredicted RBP21.94■■□□□ 1.1
GABRB3-209ENST00000555632 NYXQ9GZU5 481 aa21.94■■□□□ 1.1
GABRB3-209ENST00000555632 SH2B1Q9NRF2 756 aaPredicted RBP21.94■■□□□ 1.1
GABRB3-209ENST00000555632 IQSEC3Q9UPP2 1182 aaPredicted RBP21.94■■□□□ 1.1
GABRB3-209ENST00000555632 LAMA4Q16363 1823 aa21.93■■□□□ 1.1
GABRB3-209ENST00000555632 TTF1Q15361 905 aaPredicted RBP21.93■■□□□ 1.1
GABRB3-209ENST00000555632 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.93■■□□□ 1.1
GABRB3-209ENST00000555632 BSDC1Q9NW68 430 aaPredicted RBP21.93■■□□□ 1.1
GABRB3-209ENST00000555632 MINPP1Q9UNW1 487 aa21.93■■□□□ 1.1
GABRB3-209ENST00000555632 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.93■■□□□ 1.1
GABRB3-209ENST00000555632 ZNF532Q9HCE3 1301 aa21.93■■□□□ 1.1
GABRB3-209ENST00000555632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.92■■□□□ 1.1
GABRB3-209ENST00000555632 E7EWF7 191 aa21.92■■□□□ 1.1
GABRB3-209ENST00000555632 FGAP02671 866 aa21.92■■□□□ 1.1
GABRB3-209ENST00000555632 FOXD4L6Q3SYB3 417 aaPredicted RBP21.92■■□□□ 1.1
GABRB3-209ENST00000555632 FOXD4L3Q6VB84 417 aaPredicted RBP21.92■■□□□ 1.1
GABRB3-209ENST00000555632 TPTE2Q6XPS3 522 aa21.92■■□□□ 1.1
GABRB3-209ENST00000555632 NLRP3Q96P20 1036 aa21.92■■□□□ 1.1
GABRB3-209ENST00000555632 ALDH8A1Q9H2A2 487 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms