RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 SUPT20HQ8NEM7 779 aa12.13□□□□□ -0.47
PRKCH-218ENST00000555628 RTL9Q8NET4 1388 aa12.13□□□□□ -0.47
PRKCH-218ENST00000555628 ERBB4Q15303 1308 aa12.12□□□□□ -0.47
PRKCH-218ENST00000555628 ZNF609O15014 1411 aa12.12□□□□□ -0.47
PRKCH-218ENST00000555628 EVI5O60447 810 aa12.12□□□□□ -0.47
PRKCH-218ENST00000555628 PARP10Q53GL7 1025 aa12.12□□□□□ -0.47
PRKCH-218ENST00000555628 DPP8Q6V1X1 898 aaPredicted RBP12.12□□□□□ -0.47
PRKCH-218ENST00000555628 KIF6Q6ZMV9 814 aa12.12□□□□□ -0.47
PRKCH-218ENST00000555628 NGEFQ8N5V2 710 aa12.12□□□□□ -0.47
PRKCH-218ENST00000555628 RTF1Q92541 710 aaKnown RBP12.12□□□□□ -0.47
PRKCH-218ENST00000555628 DPF2Q92785 391 aa12.12□□□□□ -0.47
PRKCH-218ENST00000555628 CSRNP1Q96S65 589 aa12.12□□□□□ -0.47
PRKCH-218ENST00000555628 GBA2Q9HCG7 927 aaPredicted RBP12.12□□□□□ -0.47
PRKCH-218ENST00000555628 PSME4Q14997 1843 aa12.11□□□□□ -0.47
PRKCH-218ENST00000555628 PAPPA2Q9BXP8 1791 aa12.11□□□□□ -0.47
PRKCH-218ENST00000555628 ADM5C9JUS6 153 aa12.11□□□□□ -0.47
PRKCH-218ENST00000555628 BBOX1O75936 387 aa12.11□□□□□ -0.47
PRKCH-218ENST00000555628 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
PRKCH-218ENST00000555628 TNIP1Q15025 636 aa12.11□□□□□ -0.47
PRKCH-218ENST00000555628 POTEEQ6S8J3 1075 aa12.11□□□□□ -0.47
PRKCH-218ENST00000555628 SAMD7Q7Z3H4 446 aa12.11□□□□□ -0.47
PRKCH-218ENST00000555628 CTU1Q7Z7A3 348 aaKnown RBP12.11□□□□□ -0.47
PRKCH-218ENST00000555628 NLRP3Q96P20 1036 aa12.11□□□□□ -0.47
PRKCH-218ENST00000555628 PLSCR2Q9NRY7 297 aa12.11□□□□□ -0.47
PRKCH-218ENST00000555628 ZNF646O15015 1829 aaPredicted RBP12.1□□□□□ -0.47
PRKCH-218ENST00000555628 TRPA1O75762 1119 aa12.1□□□□□ -0.47
PRKCH-218ENST00000555628 MYL6BP14649 208 aa12.1□□□□□ -0.47
PRKCH-218ENST00000555628 KRT26Q7Z3Y9 468 aa12.1□□□□□ -0.47
PRKCH-218ENST00000555628 PPP1R42Q7Z4L9 355 aa12.1□□□□□ -0.47
PRKCH-218ENST00000555628 MPNDQ8N594 471 aa12.1□□□□□ -0.47
PRKCH-218ENST00000555628 CCDC102AQ96A19 550 aa12.1□□□□□ -0.47
PRKCH-218ENST00000555628 BCL2L13Q9BXK5 485 aa12.1□□□□□ -0.47
PRKCH-218ENST00000555628 HPS5Q9UPZ3 1129 aa12.1□□□□□ -0.47
PRKCH-218ENST00000555628 RRP7AQ9Y3A4 280 aaKnown RBP12.1□□□□□ -0.47
PRKCH-218ENST00000555628 H7C1D1 291 aa12.09□□□□□ -0.47
PRKCH-218ENST00000555628 PSMD14O00487 310 aa12.09□□□□□ -0.47
PRKCH-218ENST00000555628 DPYSL4O14531 572 aa12.09□□□□□ -0.47
PRKCH-218ENST00000555628 GRAPQ13588 217 aa12.09□□□□□ -0.47
PRKCH-218ENST00000555628 PROSER3Q2NL68 480 aa12.09□□□□□ -0.47
PRKCH-218ENST00000555628 RASAL3Q86YV0 1011 aa12.09□□□□□ -0.47
PRKCH-218ENST00000555628 GRAPLQ8TC17 118 aaPredicted RBP12.09□□□□□ -0.47
PRKCH-218ENST00000555628 UTP14AQ9BVJ6 771 aaKnown RBP12.09□□□□□ -0.47
PRKCH-218ENST00000555628 WDR70Q9NW82 654 aa12.09□□□□□ -0.47
PRKCH-218ENST00000555628 RANBP2P49792 3224 aaKnown RBP12.09□□□□□ -0.47
PRKCH-218ENST00000555628 ASTN2O75129 1339 aaPredicted RBP12.09□□□□□ -0.47
PRKCH-218ENST00000555628 U2AF1L5P0DN76 240 aaPredicted RBP12.08□□□□□ -0.48
PRKCH-218ENST00000555628 ZNF157P51786 506 aaPredicted RBP12.08□□□□□ -0.48
PRKCH-218ENST00000555628 U2AF1Q01081 240 aaKnown RBP eCLIP12.08□□□□□ -0.48
PRKCH-218ENST00000555628 TBC1D10BQ4KMP7 808 aaPredicted RBP12.08□□□□□ -0.48
PRKCH-218ENST00000555628 NLRP10Q86W26 655 aa12.08□□□□□ -0.48
PRKCH-218ENST00000555628 KCNQ5Q9NR82 932 aa12.08□□□□□ -0.48
PRKCH-218ENST00000555628 RBBP6Q7Z6E9 1792 aaKnown RBP12.07□□□□□ -0.48
PRKCH-218ENST00000555628 HCLS1P14317 486 aaPredicted RBP12.07□□□□□ -0.48
PRKCH-218ENST00000555628 RPS12P25398 132 aaKnown RBP12.07□□□□□ -0.48
PRKCH-218ENST00000555628 E2F4Q16254 413 aa12.07□□□□□ -0.48
PRKCH-218ENST00000555628 PNISRQ8TF01 805 aaKnown RBP12.07□□□□□ -0.48
PRKCH-218ENST00000555628 PLEKHF1Q96S99 279 aa12.07□□□□□ -0.48
PRKCH-218ENST00000555628 LAMB1P07942 1786 aa12.07□□□□□ -0.48
PRKCH-218ENST00000555628 PPP2R1AP30153 589 aa12.06□□□□□ -0.48
PRKCH-218ENST00000555628 TMC4Q7Z404 712 aa12.06□□□□□ -0.48
PRKCH-218ENST00000555628 C2orf69Q8N8R5 385 aa12.06□□□□□ -0.48
PRKCH-218ENST00000555628 CDCA5Q96FF9 252 aa12.06□□□□□ -0.48
PRKCH-218ENST00000555628 CFAP53Q96M91 514 aa12.06□□□□□ -0.48
PRKCH-218ENST00000555628 THUMPD2Q9BTF0 503 aaKnown RBP12.06□□□□□ -0.48
PRKCH-218ENST00000555628 GGA3Q9NZ52 723 aa12.06□□□□□ -0.48
PRKCH-218ENST00000555628 POLLQ9UGP5 575 aa12.06□□□□□ -0.48
PRKCH-218ENST00000555628 ZNF280AP59817 542 aaPredicted RBP12.05□□□□□ -0.48
PRKCH-218ENST00000555628 NOM1Q5C9Z4 860 aaKnown RBP12.05□□□□□ -0.48
PRKCH-218ENST00000555628 DBNDD1Q9H9R9 158 aa12.05□□□□□ -0.48
PRKCH-218ENST00000555628 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
PRKCH-218ENST00000555628 ANXA1P04083 346 aa12.04□□□□□ -0.48
PRKCH-218ENST00000555628 VIL1P09327 827 aaKnown RBP12.04□□□□□ -0.48
PRKCH-218ENST00000555628 PKN2Q16513 984 aaKnown RBP12.04□□□□□ -0.48
PRKCH-218ENST00000555628 KIF4BQ2VIQ3 1234 aa12.04□□□□□ -0.48
PRKCH-218ENST00000555628 DDX46Q7L014 1031 aaKnown RBP12.04□□□□□ -0.48
PRKCH-218ENST00000555628 SPNS2Q8IVW8 549 aa12.04□□□□□ -0.48
PRKCH-218ENST00000555628 ZNF296Q8WUU4 475 aaPredicted RBP12.04□□□□□ -0.48
PRKCH-218ENST00000555628 CELF1Q92879 486 aaKnown RBP12.04□□□□□ -0.48
PRKCH-218ENST00000555628 TMX4Q9H1E5 349 aaPredicted RBP12.04□□□□□ -0.48
PRKCH-218ENST00000555628 SH3TC1Q8TE82 1336 aa12.04□□□□□ -0.48
PRKCH-218ENST00000555628 ECE2O60344 883 aa12.03□□□□□ -0.48
PRKCH-218ENST00000555628 FKBP1BP68106 108 aa12.03□□□□□ -0.48
PRKCH-218ENST00000555628 GPSM2P81274 684 aa12.03□□□□□ -0.48
PRKCH-218ENST00000555628 WASHC4Q2M389 1173 aa12.03□□□□□ -0.48
PRKCH-218ENST00000555628 DCPSQ96C86 337 aaKnown RBP12.03□□□□□ -0.48
PRKCH-218ENST00000555628 GMLQ99445 158 aa12.03□□□□□ -0.48
PRKCH-218ENST00000555628 CFHR5Q9BXR6 569 aa12.03□□□□□ -0.48
PRKCH-218ENST00000555628 TCIRG1Q13488 830 aa12.02□□□□□ -0.49
PRKCH-218ENST00000555628 CNGB1Q14028 1251 aaPredicted RBP12.02□□□□□ -0.49
PRKCH-218ENST00000555628 SF3B3Q15393 1217 aaKnown RBP12.02□□□□□ -0.49
PRKCH-218ENST00000555628 NFE2L2Q16236 605 aa12.02□□□□□ -0.49
PRKCH-218ENST00000555628 HABP4Q5JVS0 413 aaKnown RBP12.02□□□□□ -0.49
PRKCH-218ENST00000555628 ZNF454Q8N9F8 522 aa12.02□□□□□ -0.49
PRKCH-218ENST00000555628 KIAA0100Q14667 2235 aaKnown RBP12.02□□□□□ -0.49
PRKCH-218ENST00000555628 FOSBP53539 338 aa12.01□□□□□ -0.49
PRKCH-218ENST00000555628 MOB2Q70IA6 237 aa12.01□□□□□ -0.49
PRKCH-218ENST00000555628 SULF1Q8IWU6 871 aa12.01□□□□□ -0.49
PRKCH-218ENST00000555628 TBC1D16Q8TBP0 767 aa12.01□□□□□ -0.49
PRKCH-218ENST00000555628 PITPNM2Q9BZ72 1349 aa12.01□□□□□ -0.49
PRKCH-218ENST00000555628 CEP290O15078 2479 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms