RNA–Protein interactions for RNA: ENST00000555587.5

RPGRIP1-209, Transcript of RPGR interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene RPGRIP1, Length 2,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-209ENST00000555587 RFC4P35249 363 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 NEK4P51957 841 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 ANKRD1Q15327 319 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 ANKRD18AQ8IVF6 992 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 ARHGEF1Q92888 912 aaKnown RBP10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 ZSCAN31Q96LW9 406 aaPredicted RBP10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 ZMYM6O95789 1325 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 GOLIM4O00461 696 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 SEMA3EO15041 775 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 HMGB1P09429 215 aaKnown RBP10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 NFKBIBQ15653 356 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 ERFEQ4G0M1 354 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 CREB3L3Q68CJ9 461 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 FLAD1Q8NFF5 587 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 APPBP2Q92624 585 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 NLRP3Q96P20 1036 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 ANKRD2Q9GZV1 360 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 SH2B1Q9NRF2 756 aaPredicted RBP10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 TIAM2Q8IVF5 1701 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 ZNF804BA4D1E1 1349 aa10.03□□□□□ -0.8
RPGRIP1-209ENST00000555587 TRIM37O94972 964 aa10.02□□□□□ -0.8
RPGRIP1-209ENST00000555587 PTH1RQ03431 593 aa10.02□□□□□ -0.8
RPGRIP1-209ENST00000555587 RAB3GAP1Q15042 981 aa10.02□□□□□ -0.8
RPGRIP1-209ENST00000555587 NBPF5PQ86XG9 351 aaPredicted RBP10.02□□□□□ -0.8
RPGRIP1-209ENST00000555587 CYP46A1Q9Y6A2 500 aa10.02□□□□□ -0.8
RPGRIP1-209ENST00000555587 SLC27A2O14975 620 aa10.02□□□□□ -0.81
RPGRIP1-209ENST00000555587 ADORA1P30542 326 aa10.02□□□□□ -0.81
RPGRIP1-209ENST00000555587 DEKP35659 375 aaKnown RBP10.02□□□□□ -0.81
RPGRIP1-209ENST00000555587 UBE3CQ15386 1083 aa10.02□□□□□ -0.81
RPGRIP1-209ENST00000555587 DDX46Q7L014 1031 aaKnown RBP10.02□□□□□ -0.81
RPGRIP1-209ENST00000555587 SLKQ9H2G2 1235 aaPredicted RBP10.02□□□□□ -0.81
RPGRIP1-209ENST00000555587 CTNNA3Q9UI47 895 aa10.02□□□□□ -0.81
RPGRIP1-209ENST00000555587 DDX11L8A8MPP1 907 aa10.01□□□□□ -0.81
RPGRIP1-209ENST00000555587 PRKCSHP14314 528 aaPredicted RBP10.01□□□□□ -0.81
RPGRIP1-209ENST00000555587 KCNJ4P48050 445 aa10.01□□□□□ -0.81
RPGRIP1-209ENST00000555587 CCDC102BQ68D86 513 aa10.01□□□□□ -0.81
RPGRIP1-209ENST00000555587 ILDR2Q71H61 639 aa10.01□□□□□ -0.81
RPGRIP1-209ENST00000555587 CHMP4CQ96CF2 233 aa10.01□□□□□ -0.81
RPGRIP1-209ENST00000555587 RUFY3Q7L099 469 aa10.01□□□□□ -0.81
RPGRIP1-209ENST00000555587 TMC4Q7Z404 712 aa10.01□□□□□ -0.81
RPGRIP1-209ENST00000555587 TMX3Q96JJ7 454 aa10.01□□□□□ -0.81
RPGRIP1-209ENST00000555587 GBP4Q96PP9 640 aa10.01□□□□□ -0.81
RPGRIP1-209ENST00000555587 GNL3LQ9NVN8 582 aaKnown RBP10.01□□□□□ -0.81
RPGRIP1-209ENST00000555587 LIMCH1Q9UPQ0 1083 aa10.01□□□□□ -0.81
RPGRIP1-209ENST00000555587 MAST3O60307 1309 aa10.01□□□□□ -0.81
RPGRIP1-209ENST00000555587 GTF2E1P29083 439 aaPredicted RBP10□□□□□ -0.81
RPGRIP1-209ENST00000555587 MCAMP43121 646 aa10□□□□□ -0.81
RPGRIP1-209ENST00000555587 CHRNDQ07001 517 aa10□□□□□ -0.81
RPGRIP1-209ENST00000555587 PRPF40BQ6NWY9 871 aaKnown RBP10□□□□□ -0.81
RPGRIP1-209ENST00000555587 ZNF589Q86UQ0 364 aaPredicted RBP10□□□□□ -0.81
RPGRIP1-209ENST00000555587 LRRC4BQ9NT99 713 aa10□□□□□ -0.81
RPGRIP1-209ENST00000555587 WDR19Q8NEZ3 1342 aa10□□□□□ -0.81
RPGRIP1-209ENST00000555587 CCDC88AQ3V6T2 1871 aa10□□□□□ -0.81
RPGRIP1-209ENST00000555587 CYP2E1P05181 493 aaPredicted RBP10□□□□□ -0.81
RPGRIP1-209ENST00000555587 ADD2P35612 726 aa10□□□□□ -0.81
RPGRIP1-209ENST00000555587 C15orf52Q6ZUT6 534 aaKnown RBP10□□□□□ -0.81
RPGRIP1-209ENST00000555587 RASEFQ8IZ41 740 aa10□□□□□ -0.81
RPGRIP1-209ENST00000555587 FBXL16Q8N461 479 aa10□□□□□ -0.81
RPGRIP1-209ENST00000555587 CCDC85AQ96PX6 553 aaPredicted RBP10□□□□□ -0.81
RPGRIP1-209ENST00000555587 SRP68Q9UHB9 627 aaKnown RBP10□□□□□ -0.81
RPGRIP1-209ENST00000555587 COL4A1P02462 1669 aa10□□□□□ -0.81
RPGRIP1-209ENST00000555587 LTBP1Q14766 1721 aa10□□□□□ -0.81
RPGRIP1-209ENST00000555587 MYO5AQ9Y4I1 1855 aaKnown RBP10□□□□□ -0.81
RPGRIP1-209ENST00000555587 CHD4Q14839 1912 aa10□□□□□ -0.81
RPGRIP1-209ENST00000555587 ZAP70P43403 619 aa9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 EDC3Q96F86 508 aaKnown RBP9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 JAKMIP1Q96N16 626 aaKnown RBP9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 SEC31BQ9NQW1 1179 aa9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 CASTP20810 708 aaKnown RBP9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 RPS6KB1P23443 525 aa9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 TM4SF1P30408 202 aa9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 RPS8P62241 208 aaKnown RBP9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 ST5P78524 1137 aa9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 NFIXQ14938 502 aa9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 ALX1Q15699 326 aa9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 TXNRD1Q16881 649 aa9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 CRY2Q49AN0 593 aa9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 BLOC1S2Q6QNY1 142 aa9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 CNBD1Q8NA66 436 aa9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 SPATA5Q8NB90 893 aa9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 PDRG1Q9NUG6 133 aa9.99□□□□□ -0.81
RPGRIP1-209ENST00000555587 ANKRD31Q8N7Z5 1873 aa9.98□□□□□ -0.81
RPGRIP1-209ENST00000555587 GYS1P13807 737 aa9.98□□□□□ -0.81
RPGRIP1-209ENST00000555587 PHKA1P46020 1223 aa9.98□□□□□ -0.81
RPGRIP1-209ENST00000555587 FKBP4Q02790 459 aaKnown RBP eCLIP9.98□□□□□ -0.81
RPGRIP1-209ENST00000555587 MAP3K12Q12852 859 aa9.98□□□□□ -0.81
RPGRIP1-209ENST00000555587 TAF1P21675 1872 aa9.98□□□□□ -0.81
RPGRIP1-209ENST00000555587 PNPLA7Q6ZV29 1317 aa9.98□□□□□ -0.81
RPGRIP1-209ENST00000555587 KLRG2A4D1S0 409 aaPredicted RBP9.97□□□□□ -0.81
RPGRIP1-209ENST00000555587 GNAT2P19087 354 aa9.97□□□□□ -0.81
RPGRIP1-209ENST00000555587 GRAPQ13588 217 aa9.97□□□□□ -0.81
RPGRIP1-209ENST00000555587 SCARF1Q14162 830 aa9.97□□□□□ -0.81
RPGRIP1-209ENST00000555587 CAVIN4Q5BKX8 364 aa9.97□□□□□ -0.81
RPGRIP1-209ENST00000555587 GRAPLQ8TC17 118 aaPredicted RBP9.97□□□□□ -0.81
RPGRIP1-209ENST00000555587 DENND2AQ9ULE3 1009 aa9.97□□□□□ -0.81
RPGRIP1-209ENST00000555587 CACNA1SQ13698 1873 aa9.97□□□□□ -0.81
RPGRIP1-209ENST00000555587 FAM177BA6PVY3 158 aa9.97□□□□□ -0.81
RPGRIP1-209ENST00000555587 HSPD1P10809 573 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms