RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 ATF7IPQ6VMQ6 1270 aa15.6■□□□□ 0.09
TRAPPC6B-205ENST00000555269 PNMA8AQ86V59 439 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC6B-205ENST00000555269 KIF16BQ96L93 1317 aa15.6■□□□□ 0.09
TRAPPC6B-205ENST00000555269 VIL1P09327 827 aaKnown RBP15.59■□□□□ 0.09
TRAPPC6B-205ENST00000555269 UBTFL1P0CB47 393 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC6B-205ENST00000555269 KCNJ4P48050 445 aa15.59■□□□□ 0.09
TRAPPC6B-205ENST00000555269 APLP1P51693 650 aa15.59■□□□□ 0.09
TRAPPC6B-205ENST00000555269 HIRAP54198 1017 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC6B-205ENST00000555269 LRRC24Q50LG9 513 aa15.59■□□□□ 0.09
TRAPPC6B-205ENST00000555269 MEIS3Q99687 375 aa15.59■□□□□ 0.09
TRAPPC6B-205ENST00000555269 RIPOR2Q9Y4F9 1068 aa15.59■□□□□ 0.09
TRAPPC6B-205ENST00000555269 MYH3P11055 1940 aa15.58■□□□□ 0.09
TRAPPC6B-205ENST00000555269 LTBP1Q14766 1721 aa15.58■□□□□ 0.08
TRAPPC6B-205ENST00000555269 ITGBL1O95965 494 aaPredicted RBP15.58■□□□□ 0.08
TRAPPC6B-205ENST00000555269 RBM26Q5T8P6 1007 aaKnown RBP15.58■□□□□ 0.08
TRAPPC6B-205ENST00000555269 PODNQ7Z5L7 613 aa15.58■□□□□ 0.08
TRAPPC6B-205ENST00000555269 MICALL2Q8IY33 904 aa15.58■□□□□ 0.08
TRAPPC6B-205ENST00000555269 CNTROBQ8N137 903 aa15.58■□□□□ 0.08
TRAPPC6B-205ENST00000555269 MXD3Q9BW11 206 aa15.58■□□□□ 0.08
TRAPPC6B-205ENST00000555269 ADARB2Q9NS39 739 aaKnown RBP15.58■□□□□ 0.08
TRAPPC6B-205ENST00000555269 LRRFIP2Q9Y608 721 aaKnown RBP15.58■□□□□ 0.08
TRAPPC6B-205ENST00000555269 USP17L3A6NCW0 530 aa15.57■□□□□ 0.08
TRAPPC6B-205ENST00000555269 USP17L4A6NCW7 530 aa15.57■□□□□ 0.08
TRAPPC6B-205ENST00000555269 H7C1D1 291 aa15.57■□□□□ 0.08
TRAPPC6B-205ENST00000555269 RFX5P48382 616 aaPredicted RBP15.57■□□□□ 0.08
TRAPPC6B-205ENST00000555269 FMR1Q06787 632 aaKnown RBP eCLIP15.57■□□□□ 0.08
TRAPPC6B-205ENST00000555269 ZKSCAN2Q63HK3 967 aa15.57■□□□□ 0.08
TRAPPC6B-205ENST00000555269 USP50Q70EL3 339 aaPredicted RBP15.57■□□□□ 0.08
TRAPPC6B-205ENST00000555269 USP17L1Q7RTZ2 530 aa15.57■□□□□ 0.08
TRAPPC6B-205ENST00000555269 SAMD7Q7Z3H4 446 aa15.57■□□□□ 0.08
TRAPPC6B-205ENST00000555269 TRPM4Q8TD43 1214 aa15.57■□□□□ 0.08
TRAPPC6B-205ENST00000555269 DPF2Q92785 391 aa15.57■□□□□ 0.08
TRAPPC6B-205ENST00000555269 COA1Q9GZY4 146 aa15.57■□□□□ 0.08
TRAPPC6B-205ENST00000555269 EGFRP00533 1210 aa15.56■□□□□ 0.08
TRAPPC6B-205ENST00000555269 RSBN1LQ6PCB5 846 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC6B-205ENST00000555269 TMEM57Q8N5G2 664 aa15.56■□□□□ 0.08
TRAPPC6B-205ENST00000555269 DNAJC5GQ8N7S2 189 aa15.56■□□□□ 0.08
TRAPPC6B-205ENST00000555269 FBXW7Q969H0 707 aa15.56■□□□□ 0.08
TRAPPC6B-205ENST00000555269 IRS2Q9Y4H2 1338 aa15.56■□□□□ 0.08
TRAPPC6B-205ENST00000555269 MED23Q9ULK4 1368 aa15.56■□□□□ 0.08
TRAPPC6B-205ENST00000555269 PTPN12Q05209 780 aaKnown RBP15.55■□□□□ 0.08
TRAPPC6B-205ENST00000555269 TBC1D10BQ4KMP7 808 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC6B-205ENST00000555269 CD209Q9NNX6 404 aa15.55■□□□□ 0.08
TRAPPC6B-205ENST00000555269 SCN4AP35499 1836 aa15.54■□□□□ 0.08
TRAPPC6B-205ENST00000555269 RLBP1P12271 317 aa15.54■□□□□ 0.08
TRAPPC6B-205ENST00000555269 RPS12P25398 132 aaKnown RBP15.54■□□□□ 0.08
TRAPPC6B-205ENST00000555269 TTLL5Q6EMB2 1281 aa15.54■□□□□ 0.08
TRAPPC6B-205ENST00000555269 C15orf52Q6ZUT6 534 aaKnown RBP15.54■□□□□ 0.08
TRAPPC6B-205ENST00000555269 GMLQ99445 158 aa15.54■□□□□ 0.08
TRAPPC6B-205ENST00000555269 SPEF2Q9C093 1822 aa15.54■□□□□ 0.08
TRAPPC6B-205ENST00000555269 MROH5Q6ZUA9 1318 aa15.53■□□□□ 0.08
TRAPPC6B-205ENST00000555269 PASKQ96RG2 1323 aa15.53■□□□□ 0.08
TRAPPC6B-205ENST00000555269 GNAI3P08754 354 aa15.53■□□□□ 0.08
TRAPPC6B-205ENST00000555269 GYG1P46976 350 aa15.53■□□□□ 0.08
TRAPPC6B-205ENST00000555269 GTF2IP78347 998 aa15.53■□□□□ 0.08
TRAPPC6B-205ENST00000555269 UBE4AQ14139 1066 aa15.53■□□□□ 0.08
TRAPPC6B-205ENST00000555269 METTL24Q5JXM2 366 aa15.53■□□□□ 0.08
TRAPPC6B-205ENST00000555269 DACT2Q5SW24 774 aa15.53■□□□□ 0.08
TRAPPC6B-205ENST00000555269 DLK2Q6UY11 383 aa15.53■□□□□ 0.08
TRAPPC6B-205ENST00000555269 AGBL3Q8NEM8 1001 aa15.53■□□□□ 0.08
TRAPPC6B-205ENST00000555269 SIL1Q9H173 461 aa15.53■□□□□ 0.08
TRAPPC6B-205ENST00000555269 PA2G4Q9UQ80 394 aaKnown RBP15.53■□□□□ 0.08
TRAPPC6B-205ENST00000555269 EYA2O00167 538 aa15.52■□□□□ 0.08
TRAPPC6B-205ENST00000555269 TRAF5O00463 557 aa15.52■□□□□ 0.08
TRAPPC6B-205ENST00000555269 STRIP1Q5VSL9 837 aa15.52■□□□□ 0.08
TRAPPC6B-205ENST00000555269 ATG9AQ7Z3C6 839 aa15.52■□□□□ 0.08
TRAPPC6B-205ENST00000555269 DZIP1LQ8IYY4 767 aaKnown RBP15.52■□□□□ 0.08
TRAPPC6B-205ENST00000555269 FAM84BQ96KN1 310 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC6B-205ENST00000555269 PGAP2Q9UHJ9 254 aa15.52■□□□□ 0.08
TRAPPC6B-205ENST00000555269 JAG2Q9Y219 1238 aa15.52■□□□□ 0.08
TRAPPC6B-205ENST00000555269 SCN9AQ15858 1988 aa15.52■□□□□ 0.07
TRAPPC6B-205ENST00000555269 ASTN2O75129 1339 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC6B-205ENST00000555269 PDE8BO95263 885 aa15.51■□□□□ 0.07
TRAPPC6B-205ENST00000555269 USP17L8P0C7I0 530 aa15.51■□□□□ 0.07
TRAPPC6B-205ENST00000555269 VGLL2Q8N8G2 317 aa15.51■□□□□ 0.07
TRAPPC6B-205ENST00000555269 PANK1Q8TE04 598 aa15.51■□□□□ 0.07
TRAPPC6B-205ENST00000555269 GLIS2Q9BZE0 524 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC6B-205ENST00000555269 HDAC5Q9UQL6 1122 aa15.51■□□□□ 0.07
TRAPPC6B-205ENST00000555269 IL1R1P14778 569 aa15.5■□□□□ 0.07
TRAPPC6B-205ENST00000555269 ZNF280AP59817 542 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC6B-205ENST00000555269 ZNF804AQ7Z570 1209 aa15.5■□□□□ 0.07
TRAPPC6B-205ENST00000555269 USP48Q86UV5 1035 aa15.5■□□□□ 0.07
TRAPPC6B-205ENST00000555269 GNAI2P04899 355 aa15.49■□□□□ 0.07
TRAPPC6B-205ENST00000555269 HIBADHP31937 336 aaKnown RBP15.49■□□□□ 0.07
TRAPPC6B-205ENST00000555269 BCAMP50895 628 aa15.49■□□□□ 0.07
TRAPPC6B-205ENST00000555269 SCARF1Q14162 830 aa15.49■□□□□ 0.07
TRAPPC6B-205ENST00000555269 KIF4BQ2VIQ3 1234 aa15.49■□□□□ 0.07
TRAPPC6B-205ENST00000555269 FBXO33Q7Z6M2 555 aa15.49■□□□□ 0.07
TRAPPC6B-205ENST00000555269 FTSJ3Q8IY81 847 aaKnown RBP15.49■□□□□ 0.07
TRAPPC6B-205ENST00000555269 CERS5Q8N5B7 392 aa15.49■□□□□ 0.07
TRAPPC6B-205ENST00000555269 ZC3H15Q8WU90 426 aaKnown RBP15.49■□□□□ 0.07
TRAPPC6B-205ENST00000555269 SPDYE2BA6NHP3 402 aa15.48■□□□□ 0.07
TRAPPC6B-205ENST00000555269 TMEM88BA6NKF7 163 aa15.48■□□□□ 0.07
TRAPPC6B-205ENST00000555269 ZBTB7BO15156 539 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC6B-205ENST00000555269 SRGAP3O43295 1099 aa15.48■□□□□ 0.07
TRAPPC6B-205ENST00000555269 SPDYE6P0CI01 402 aa15.48■□□□□ 0.07
TRAPPC6B-205ENST00000555269 FGFR2P21802 821 aa15.48■□□□□ 0.07
TRAPPC6B-205ENST00000555269 SPDYE2Q495Y8 402 aa15.48■□□□□ 0.07
TRAPPC6B-205ENST00000555269 CST9Q5W186 159 aa15.48■□□□□ 0.07
TRAPPC6B-205ENST00000555269 KIAA0825Q8IV33 1275 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms