RNA–Protein interactions for RNA: ENST00000555241.5

SYNE2-218, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-218ENST00000555241 TRAF5O00463 557 aa27.12■■□□□ 1.93
SYNE2-218ENST00000555241 USP44Q9H0E7 712 aa27.12■■□□□ 1.93
SYNE2-218ENST00000555241 BICC1Q9H694 974 aaKnown RBP27.12■■□□□ 1.93
SYNE2-218ENST00000555241 CNNM1Q9NRU3 951 aa27.12■■□□□ 1.93
SYNE2-218ENST00000555241 TAF5LO75529 589 aa27.11■■□□□ 1.93
SYNE2-218ENST00000555241 EGFRP00533 1210 aa27.11■■□□□ 1.93
SYNE2-218ENST00000555241 KLRK1P26718 216 aa27.11■■□□□ 1.93
SYNE2-218ENST00000555241 RARSP54136 660 aaKnown RBP27.11■■□□□ 1.93
SYNE2-218ENST00000555241 FMR1Q06787 632 aaKnown RBP eCLIP27.11■■□□□ 1.93
SYNE2-218ENST00000555241 CDC37L1Q7L3B6 337 aa27.11■■□□□ 1.93
SYNE2-218ENST00000555241 GMLQ99445 158 aa27.11■■□□□ 1.93
SYNE2-218ENST00000555241 GLIS2Q9BZE0 524 aaPredicted RBP27.11■■□□□ 1.93
SYNE2-218ENST00000555241 NOB1Q9ULX3 412 aaKnown RBP27.11■■□□□ 1.93
SYNE2-218ENST00000555241 ZNF280AP59817 542 aaPredicted RBP27.1■■□□□ 1.93
SYNE2-218ENST00000555241 KIF4BQ2VIQ3 1234 aa27.1■■□□□ 1.93
SYNE2-218ENST00000555241 C15orf52Q6ZUT6 534 aaKnown RBP27.1■■□□□ 1.93
SYNE2-218ENST00000555241 HELBQ8NG08 1087 aaPredicted RBP27.1■■□□□ 1.93
SYNE2-218ENST00000555241 API5Q9BZZ5 524 aaKnown RBP27.1■■□□□ 1.93
SYNE2-218ENST00000555241 IRS2Q9Y4H2 1338 aa27.1■■□□□ 1.93
SYNE2-218ENST00000555241 RASSF10A6NK89 507 aa27.09■■□□□ 1.93
SYNE2-218ENST00000555241 DACT2Q5SW24 774 aa27.09■■□□□ 1.93
SYNE2-218ENST00000555241 RBM26Q5T8P6 1007 aaKnown RBP27.09■■□□□ 1.93
SYNE2-218ENST00000555241 STRIP1Q5VSL9 837 aa27.09■■□□□ 1.93
SYNE2-218ENST00000555241 ANKRD44Q8N8A2 993 aa27.09■■□□□ 1.93
SYNE2-218ENST00000555241 MYO3BQ8WXR4 1341 aa27.09■■□□□ 1.93
SYNE2-218ENST00000555241 USP17L8P0C7I0 530 aa27.08■■□□□ 1.93
SYNE2-218ENST00000555241 HNRNPUQ00839 825 aaKnown RBP eCLIP27.08■■□□□ 1.93
SYNE2-218ENST00000555241 ABT1Q9ULW3 272 aaKnown RBP27.08■■□□□ 1.93
SYNE2-218ENST00000555241 KIF16BQ96L93 1317 aa27.08■■□□□ 1.93
SYNE2-218ENST00000555241 SNAP23O00161 211 aa27.07■■□□□ 1.92
SYNE2-218ENST00000555241 CST9Q5W186 159 aa27.07■■□□□ 1.92
SYNE2-218ENST00000555241 DEFB115Q30KQ5 88 aa27.06■■□□□ 1.92
SYNE2-218ENST00000555241 FBXW7Q969H0 707 aa27.06■■□□□ 1.92
SYNE2-218ENST00000555241 CD209Q9NNX6 404 aa27.06■■□□□ 1.92
SYNE2-218ENST00000555241 TTLL5Q6EMB2 1281 aa27.05■■□□□ 1.92
SYNE2-218ENST00000555241 ARHGAP45Q92619 1136 aa27.05■■□□□ 1.92
SYNE2-218ENST00000555241 DCPSQ96C86 337 aaKnown RBP27.05■■□□□ 1.92
SYNE2-218ENST00000555241 PLIN1O60240 522 aa27.04■■□□□ 1.92
SYNE2-218ENST00000555241 CELF2O95319 508 aaKnown RBP27.04■■□□□ 1.92
SYNE2-218ENST00000555241 VEGFBP49765 207 aa27.04■■□□□ 1.92
SYNE2-218ENST00000555241 ZNF804AQ7Z570 1209 aa27.04■■□□□ 1.92
SYNE2-218ENST00000555241 PUS3Q9BZE2 481 aaKnown RBP27.04■■□□□ 1.92
SYNE2-218ENST00000555241 MYOZ2Q9NPC6 264 aa27.04■■□□□ 1.92
SYNE2-218ENST00000555241 MROH5Q6ZUA9 1318 aa27.04■■□□□ 1.92
SYNE2-218ENST00000555241 MMP14P50281 582 aa27.03■■□□□ 1.92
SYNE2-218ENST00000555241 UBE4AQ14139 1066 aa27.03■■□□□ 1.92
SYNE2-218ENST00000555241 KRT26Q7Z3Y9 468 aa27.03■■□□□ 1.92
SYNE2-218ENST00000555241 USP48Q86UV5 1035 aa27.03■■□□□ 1.92
SYNE2-218ENST00000555241 MXD3Q9BW11 206 aa27.03■■□□□ 1.92
SYNE2-218ENST00000555241 RIPOR2Q9Y4F9 1068 aa27.03■■□□□ 1.92
SYNE2-218ENST00000555241 TLL2Q9Y6L7 1015 aa27.03■■□□□ 1.92
SYNE2-218ENST00000555241 GTF2IP78347 998 aa27.02■■□□□ 1.92
SYNE2-218ENST00000555241 OGFOD1Q8N543 542 aa27.02■■□□□ 1.92
SYNE2-218ENST00000555241 GGA3Q9NZ52 723 aa27.02■■□□□ 1.92
SYNE2-218ENST00000555241 THSD7BQ9C0I4 1608 aa27.01■■□□□ 1.92
SYNE2-218ENST00000555241 IL1R1P14778 569 aa27.01■■□□□ 1.91
SYNE2-218ENST00000555241 ECM29Q5VYK3 1845 aa27■■□□□ 1.91
SYNE2-218ENST00000555241 UBTFL1P0CB47 393 aaPredicted RBP27■■□□□ 1.91
SYNE2-218ENST00000555241 HSPA1AP0DMV8 641 aaKnown RBP27■■□□□ 1.91
SYNE2-218ENST00000555241 HSPA1BP0DMV9 641 aaKnown RBP27■■□□□ 1.91
SYNE2-218ENST00000555241 SCARF1Q14162 830 aa27■■□□□ 1.91
SYNE2-218ENST00000555241 ZNF408Q9H9D4 720 aa27■■□□□ 1.91
SYNE2-218ENST00000555241 ARAP2Q8WZ64 1704 aa26.99■■□□□ 1.91
SYNE2-218ENST00000555241 SULF1Q8IWU6 871 aa26.99■■□□□ 1.91
SYNE2-218ENST00000555241 HDAC5Q9UQL6 1122 aa26.99■■□□□ 1.91
SYNE2-218ENST00000555241 ASTN2O75129 1339 aaPredicted RBP26.98■■□□□ 1.91
SYNE2-218ENST00000555241 PITPNM2Q9BZ72 1349 aa26.98■■□□□ 1.91
SYNE2-218ENST00000555241 WDR33Q9C0J8 1336 aaKnown RBP26.98■■□□□ 1.91
SYNE2-218ENST00000555241 IPO8O15397 1037 aaKnown RBP26.98■■□□□ 1.91
SYNE2-218ENST00000555241 LRRC24Q50LG9 513 aa26.98■■□□□ 1.91
SYNE2-218ENST00000555241 SAPCD2Q86UD0 394 aa26.98■■□□□ 1.91
SYNE2-218ENST00000555241 ADM5C9JUS6 153 aa26.97■■□□□ 1.91
SYNE2-218ENST00000555241 ECE1P42892 770 aa26.97■■□□□ 1.91
SYNE2-218ENST00000555241 ANGEL2Q5VTE6 544 aaKnown RBP26.97■■□□□ 1.91
SYNE2-218ENST00000555241 INTS3Q68E01 1043 aaKnown RBP26.97■■□□□ 1.91
SYNE2-218ENST00000555241 HDAC9Q9UKV0 1011 aa26.97■■□□□ 1.91
SYNE2-218ENST00000555241 ZBED9Q6R2W3 1325 aa26.96■■□□□ 1.91
SYNE2-218ENST00000555241 RFX5P48382 616 aaPredicted RBP26.96■■□□□ 1.91
SYNE2-218ENST00000555241 METTL24Q5JXM2 366 aa26.96■■□□□ 1.91
SYNE2-218ENST00000555241 KIAA0825Q8IV33 1275 aa26.96■■□□□ 1.91
SYNE2-218ENST00000555241 KLHDC4Q8TBB5 520 aa26.96■■□□□ 1.91
SYNE2-218ENST00000555241 HHIPL1Q96JK4 782 aa26.96■■□□□ 1.91
SYNE2-218ENST00000555241 MYH13Q9UKX3 1938 aa26.96■■□□□ 1.91
SYNE2-218ENST00000555241 BCAR3O75815 825 aa26.95■■□□□ 1.9
SYNE2-218ENST00000555241 FKBP1AP62942 108 aaKnown RBP26.95■■□□□ 1.9
SYNE2-218ENST00000555241 DLK2Q6UY11 383 aa26.95■■□□□ 1.9
SYNE2-218ENST00000555241 PAXIP1Q6ZW49 1069 aaPredicted RBP26.95■■□□□ 1.9
SYNE2-218ENST00000555241 VGLL2Q8N8G2 317 aa26.95■■□□□ 1.9
SYNE2-218ENST00000555241 CAPNS2Q96L46 248 aa26.95■■□□□ 1.9
SYNE2-218ENST00000555241 PDE8BO95263 885 aa26.94■■□□□ 1.9
SYNE2-218ENST00000555241 HIBADHP31937 336 aaKnown RBP26.94■■□□□ 1.9
SYNE2-218ENST00000555241 WNT10BO00744 389 aa26.93■■□□□ 1.9
SYNE2-218ENST00000555241 SASH1O94885 1247 aa26.93■■□□□ 1.9
SYNE2-218ENST00000555241 TRIM27P14373 513 aa26.93■■□□□ 1.9
SYNE2-218ENST00000555241 GYG1P46976 350 aa26.93■■□□□ 1.9
SYNE2-218ENST00000555241 PTPN12Q05209 780 aaKnown RBP26.93■■□□□ 1.9
SYNE2-218ENST00000555241 NBPF9Q3BBW0 867 aa26.93■■□□□ 1.9
SYNE2-218ENST00000555241 CYP4F22Q6NT55 531 aa26.93■■□□□ 1.9
SYNE2-218ENST00000555241 ATF7IPQ6VMQ6 1270 aa26.93■■□□□ 1.9
SYNE2-218ENST00000555241 CERS5Q8N5B7 392 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms