RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 ZNRF3Q9ULT6 936 aa13.18□□□□□ -0.3
TMEM260-206ENST00000555046 ANKRD31Q8N7Z5 1873 aa13.18□□□□□ -0.3
TMEM260-206ENST00000555046 FZD9O00144 591 aa13.17□□□□□ -0.3
TMEM260-206ENST00000555046 SRGAP3O43295 1099 aa13.17□□□□□ -0.3
TMEM260-206ENST00000555046 TNIP1Q15025 636 aa13.17□□□□□ -0.3
TMEM260-206ENST00000555046 AOC3Q16853 763 aa13.17□□□□□ -0.3
TMEM260-206ENST00000555046 TNNQ9UQP3 1299 aa13.17□□□□□ -0.3
TMEM260-206ENST00000555046 RIPOR2Q9Y4F9 1068 aa13.17□□□□□ -0.3
TMEM260-206ENST00000555046 ADAMTSL1Q8N6G6 1762 aa13.17□□□□□ -0.3
TMEM260-206ENST00000555046 MKI67P46013 3256 aaKnown RBP13.17□□□□□ -0.3
TMEM260-206ENST00000555046 ZNF804BA4D1E1 1349 aa13.16□□□□□ -0.3
TMEM260-206ENST00000555046 EYA2O00167 538 aa13.16□□□□□ -0.3
TMEM260-206ENST00000555046 CIAO1O76071 339 aa13.16□□□□□ -0.3
TMEM260-206ENST00000555046 ATP8B2P98198 1209 aa13.16□□□□□ -0.3
TMEM260-206ENST00000555046 UBE4AQ14139 1066 aa13.16□□□□□ -0.3
TMEM260-206ENST00000555046 PODNQ7Z5L7 613 aa13.16□□□□□ -0.3
TMEM260-206ENST00000555046 ZNF594Q96JF6 807 aaPredicted RBP13.16□□□□□ -0.3
TMEM260-206ENST00000555046 COPRSQ9NQ92 184 aa13.16□□□□□ -0.3
TMEM260-206ENST00000555046 CEP126Q9P2H0 1117 aa13.16□□□□□ -0.3
TMEM260-206ENST00000555046 COG6Q9Y2V7 657 aa13.16□□□□□ -0.3
TMEM260-206ENST00000555046 SLX4Q8IY92 1834 aa13.16□□□□□ -0.3
TMEM260-206ENST00000555046 DLL1O00548 723 aa13.15□□□□□ -0.3
TMEM260-206ENST00000555046 RIMBP2O15034 1052 aa13.15□□□□□ -0.3
TMEM260-206ENST00000555046 IL15P40933 162 aaPredicted RBP13.15□□□□□ -0.3
TMEM260-206ENST00000555046 PTPN12Q05209 780 aaKnown RBP13.15□□□□□ -0.3
TMEM260-206ENST00000555046 G3BP1Q13283 466 aaKnown RBP eCLIP13.15□□□□□ -0.3
TMEM260-206ENST00000555046 HABP4Q5JVS0 413 aaKnown RBP13.15□□□□□ -0.3
TMEM260-206ENST00000555046 METTL24Q5JXM2 366 aa13.15□□□□□ -0.3
TMEM260-206ENST00000555046 C15orf52Q6ZUT6 534 aaKnown RBP13.15□□□□□ -0.3
TMEM260-206ENST00000555046 RPAP2Q8IXW5 612 aaPredicted RBP13.15□□□□□ -0.3
TMEM260-206ENST00000555046 GPC2Q8N158 579 aa13.15□□□□□ -0.3
TMEM260-206ENST00000555046 GCC1Q96CN9 775 aa13.15□□□□□ -0.3
TMEM260-206ENST00000555046 COA1Q9GZY4 146 aa13.15□□□□□ -0.3
TMEM260-206ENST00000555046 SCN4AP35499 1836 aa13.15□□□□□ -0.3
TMEM260-206ENST00000555046 IQCA1LA6NCM1 817 aa13.14□□□□□ -0.31
TMEM260-206ENST00000555046 HMMRO75330 724 aa13.14□□□□□ -0.31
TMEM260-206ENST00000555046 PDE8BO95263 885 aa13.14□□□□□ -0.31
TMEM260-206ENST00000555046 RFX5P48382 616 aaPredicted RBP13.14□□□□□ -0.31
TMEM260-206ENST00000555046 RRP1P56182 461 aaKnown RBP13.14□□□□□ -0.31
TMEM260-206ENST00000555046 DGKZQ13574 1117 aa13.14□□□□□ -0.31
TMEM260-206ENST00000555046 AAMPQ13685 434 aa13.14□□□□□ -0.31
TMEM260-206ENST00000555046 DEFB115Q30KQ5 88 aa13.14□□□□□ -0.31
TMEM260-206ENST00000555046 ZBTB40Q9NUA8 1239 aa13.14□□□□□ -0.31
TMEM260-206ENST00000555046 TAF5LO75529 589 aa13.13□□□□□ -0.31
TMEM260-206ENST00000555046 HSP90AB4PQ58FF6 505 aa13.13□□□□□ -0.31
TMEM260-206ENST00000555046 CAVIN4Q5BKX8 364 aa13.13□□□□□ -0.31
TMEM260-206ENST00000555046 CIAPIN1Q6FI81 312 aa13.13□□□□□ -0.31
TMEM260-206ENST00000555046 HELBQ8NG08 1087 aaPredicted RBP13.13□□□□□ -0.31
TMEM260-206ENST00000555046 PUS3Q9BZE2 481 aaKnown RBP13.13□□□□□ -0.31
TMEM260-206ENST00000555046 AKAP2Q9Y2D5 859 aa13.13□□□□□ -0.31
TMEM260-206ENST00000555046 SNED1Q8TER0 1413 aa13.13□□□□□ -0.31
TMEM260-206ENST00000555046 ITGBL1O95965 494 aaPredicted RBP13.12□□□□□ -0.31
TMEM260-206ENST00000555046 IFIT1P09914 478 aaKnown RBP13.12□□□□□ -0.31
TMEM260-206ENST00000555046 MMP14P50281 582 aa13.12□□□□□ -0.31
TMEM260-206ENST00000555046 PUM3Q15397 648 aaKnown RBP13.12□□□□□ -0.31
TMEM260-206ENST00000555046 LRRC24Q50LG9 513 aa13.12□□□□□ -0.31
TMEM260-206ENST00000555046 ZNF804AQ7Z570 1209 aa13.12□□□□□ -0.31
TMEM260-206ENST00000555046 VPS37DQ86XT2 251 aa13.12□□□□□ -0.31
TMEM260-206ENST00000555046 SSH3Q8TE77 659 aa13.12□□□□□ -0.31
TMEM260-206ENST00000555046 COL11A2P13942 1736 aaPredicted RBP13.11□□□□□ -0.31
TMEM260-206ENST00000555046 MED23Q9ULK4 1368 aa13.11□□□□□ -0.31
TMEM260-206ENST00000555046 COL6A3P12111 3177 aa13.11□□□□□ -0.31
TMEM260-206ENST00000555046 FER1L6Q2WGJ9 1857 aa13.11□□□□□ -0.31
TMEM260-206ENST00000555046 ECE2O60344 883 aa13.11□□□□□ -0.31
TMEM260-206ENST00000555046 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
TMEM260-206ENST00000555046 LMOD1P29536 600 aaPredicted RBP13.11□□□□□ -0.31
TMEM260-206ENST00000555046 CXCL9Q07325 125 aa13.11□□□□□ -0.31
TMEM260-206ENST00000555046 POLA2Q14181 598 aa13.11□□□□□ -0.31
TMEM260-206ENST00000555046 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
TMEM260-206ENST00000555046 LDHDQ86WU2 507 aa13.11□□□□□ -0.31
TMEM260-206ENST00000555046 LPIN2Q92539 896 aa13.11□□□□□ -0.31
TMEM260-206ENST00000555046 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
TMEM260-206ENST00000555046 BEGAINQ9BUH8 593 aa13.11□□□□□ -0.31
TMEM260-206ENST00000555046 SIL1Q9H173 461 aa13.11□□□□□ -0.31
TMEM260-206ENST00000555046 GJA3Q9Y6H8 435 aa13.11□□□□□ -0.31
TMEM260-206ENST00000555046 USP17L3A6NCW0 530 aa13.1□□□□□ -0.31
TMEM260-206ENST00000555046 USP17L4A6NCW7 530 aa13.1□□□□□ -0.31
TMEM260-206ENST00000555046 SURF6O75683 361 aaKnown RBP13.1□□□□□ -0.31
TMEM260-206ENST00000555046 SLC5A1P13866 664 aa13.1□□□□□ -0.31
TMEM260-206ENST00000555046 RPS12P25398 132 aaKnown RBP13.1□□□□□ -0.31
TMEM260-206ENST00000555046 HIBADHP31937 336 aaKnown RBP13.1□□□□□ -0.31
TMEM260-206ENST00000555046 OS9Q13438 667 aaPredicted RBP13.1□□□□□ -0.31
TMEM260-206ENST00000555046 C20orf194Q5TEA3 1177 aa13.1□□□□□ -0.31
TMEM260-206ENST00000555046 CEP85Q6P2H3 762 aa13.1□□□□□ -0.31
TMEM260-206ENST00000555046 USP17L1Q7RTZ2 530 aa13.1□□□□□ -0.31
TMEM260-206ENST00000555046 KLHDC4Q8TBB5 520 aa13.1□□□□□ -0.31
TMEM260-206ENST00000555046 DBNDD1Q9H9R9 158 aa13.1□□□□□ -0.31
TMEM260-206ENST00000555046 GNL3LQ9NVN8 582 aaKnown RBP13.1□□□□□ -0.31
TMEM260-206ENST00000555046 DDX60Q8IY21 1712 aaKnown RBP13.1□□□□□ -0.31
TMEM260-206ENST00000555046 TRIOBPQ9H2D6 2365 aa13.09□□□□□ -0.31
TMEM260-206ENST00000555046 PNMA6EA0A0J9YXQ4 647 aa13.09□□□□□ -0.31
TMEM260-206ENST00000555046 RAD17O75943 681 aa13.09□□□□□ -0.31
TMEM260-206ENST00000555046 VIL1P09327 827 aaKnown RBP13.09□□□□□ -0.31
TMEM260-206ENST00000555046 FXR1P51114 621 aaKnown RBP eCLIP13.09□□□□□ -0.31
TMEM260-206ENST00000555046 ATG9AQ7Z3C6 839 aa13.09□□□□□ -0.31
TMEM260-206ENST00000555046 PNMA8AQ86V59 439 aaPredicted RBP13.09□□□□□ -0.31
TMEM260-206ENST00000555046 ERC1Q8IUD2 1116 aa13.09□□□□□ -0.31
TMEM260-206ENST00000555046 DPF2Q92785 391 aa13.09□□□□□ -0.31
TMEM260-206ENST00000555046 C1orf115Q9H7X2 142 aa13.09□□□□□ -0.31
TMEM260-206ENST00000555046 CD209Q9NNX6 404 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms