RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 SPRYD7Q5W111 196 aa17.13■□□□□ 0.33
TUBB3-207ENST00000554927 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
TUBB3-207ENST00000554927 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-207ENST00000554927 ANGEL1Q9UNK9 670 aaKnown RBP17.13■□□□□ 0.33
TUBB3-207ENST00000554927 PDE8AO60658 829 aa17.12■□□□□ 0.33
TUBB3-207ENST00000554927 HOXB7P09629 217 aa17.12■□□□□ 0.33
TUBB3-207ENST00000554927 MYD88Q99836 296 aa17.12■□□□□ 0.33
TUBB3-207ENST00000554927 DACT2Q5SW24 774 aa17.11■□□□□ 0.33
TUBB3-207ENST00000554927 OTOP1Q7RTM1 612 aa17.11■□□□□ 0.33
TUBB3-207ENST00000554927 CCDC146Q8IYE0 955 aa17.11■□□□□ 0.33
TUBB3-207ENST00000554927 MYO3BQ8WXR4 1341 aa17.11■□□□□ 0.33
TUBB3-207ENST00000554927 MANSC4A6NHS7 340 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-207ENST00000554927 PCCAP05165 728 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-207ENST00000554927 DUSP27Q5VZP5 1158 aa17.1■□□□□ 0.33
TUBB3-207ENST00000554927 APOBEC3FQ8IUX4 373 aaKnown RBP17.1■□□□□ 0.33
TUBB3-207ENST00000554927 SLC10A4Q96EP9 437 aa17.1■□□□□ 0.33
TUBB3-207ENST00000554927 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
TUBB3-207ENST00000554927 WTIPA6NIX2 430 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-207ENST00000554927 INHBEP58166 350 aa17.09■□□□□ 0.33
TUBB3-207ENST00000554927 IFNL1Q8IU54 200 aa17.09■□□□□ 0.33
TUBB3-207ENST00000554927 CCDC191Q8NCU4 936 aa17.09■□□□□ 0.33
TUBB3-207ENST00000554927 CWC25Q9NXE8 425 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-207ENST00000554927 FZD1Q9UP38 647 aa17.09■□□□□ 0.33
TUBB3-207ENST00000554927 MED23Q9ULK4 1368 aa17.08■□□□□ 0.32
TUBB3-207ENST00000554927 LDLRAD1Q5T700 205 aa17.08■□□□□ 0.32
TUBB3-207ENST00000554927 STRIP1Q5VSL9 837 aa17.08■□□□□ 0.32
TUBB3-207ENST00000554927 KIAA0825Q8IV33 1275 aa17.08■□□□□ 0.32
TUBB3-207ENST00000554927 RUNDC1Q96C34 613 aa17.08■□□□□ 0.32
TUBB3-207ENST00000554927 ERO1AQ96HE7 468 aa17.08■□□□□ 0.32
TUBB3-207ENST00000554927 PHAXQ9H814 394 aaKnown RBP17.08■□□□□ 0.32
TUBB3-207ENST00000554927 PSME4Q14997 1843 aa17.07■□□□□ 0.32
TUBB3-207ENST00000554927 EN2P19622 333 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-207ENST00000554927 ZEB1P37275 1124 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-207ENST00000554927 FXR1P51114 621 aaKnown RBP eCLIP17.07■□□□□ 0.32
TUBB3-207ENST00000554927 CD99L2Q8TCZ2 262 aa17.07■□□□□ 0.32
TUBB3-207ENST00000554927 COA1Q9GZY4 146 aa17.07■□□□□ 0.32
TUBB3-207ENST00000554927 PTPN22Q9Y2R2 807 aa17.07■□□□□ 0.32
TUBB3-207ENST00000554927 CCT4P50991 539 aaKnown RBP17.06■□□□□ 0.32
TUBB3-207ENST00000554927 CTSWP56202 376 aa17.06■□□□□ 0.32
TUBB3-207ENST00000554927 TTLL5Q6EMB2 1281 aa17.06■□□□□ 0.32
TUBB3-207ENST00000554927 MINPP1Q9UNW1 487 aa17.06■□□□□ 0.32
TUBB3-207ENST00000554927 IGF2BP3O00425 579 aaKnown RBP eCLIP17.05■□□□□ 0.32
TUBB3-207ENST00000554927 PPP1R12BO60237 982 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-207ENST00000554927 ZBTB48P10074 688 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-207ENST00000554927 MMP14P50281 582 aa17.05■□□□□ 0.32
TUBB3-207ENST00000554927 OTUD7BQ6GQQ9 843 aa17.05■□□□□ 0.32
TUBB3-207ENST00000554927 WNK4Q96J92 1243 aa17.05■□□□□ 0.32
TUBB3-207ENST00000554927 CLMNQ96JQ2 1002 aa17.05■□□□□ 0.32
TUBB3-207ENST00000554927 TMEM106CQ9BVX2 250 aa17.05■□□□□ 0.32
TUBB3-207ENST00000554927 DEFB129Q9H1M3 183 aa17.05■□□□□ 0.32
TUBB3-207ENST00000554927 PRKRIP1Q9H875 184 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-207ENST00000554927 EFCC1Q9HA90 598 aa17.05■□□□□ 0.32
TUBB3-207ENST00000554927 BSDC1Q9NW68 430 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-207ENST00000554927 TRIM35Q9UPQ4 493 aa17.05■□□□□ 0.32
TUBB3-207ENST00000554927 ADAMTS8Q9UP79 889 aa17.04■□□□□ 0.32
TUBB3-207ENST00000554927 ELL2O00472 640 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-207ENST00000554927 DDX58O95786 925 aaKnown RBP17.03■□□□□ 0.32
TUBB3-207ENST00000554927 GTF2IP78347 998 aa17.03■□□□□ 0.32
TUBB3-207ENST00000554927 CRHR2Q13324 411 aa17.03■□□□□ 0.32
TUBB3-207ENST00000554927 DLGAP5Q15398 846 aa17.03■□□□□ 0.32
TUBB3-207ENST00000554927 ARMC5Q96C12 935 aa17.03■□□□□ 0.32
TUBB3-207ENST00000554927 METTL22Q9BUU2 404 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-207ENST00000554927 MBIPQ9NS73 344 aa17.03■□□□□ 0.32
TUBB3-207ENST00000554927 IGHMBP2P38935 993 aaKnown RBP17.02■□□□□ 0.32
TUBB3-207ENST00000554927 SP3Q02447 781 aa17.02■□□□□ 0.32
TUBB3-207ENST00000554927 TXNRD3Q86VQ6 643 aa17.02■□□□□ 0.32
TUBB3-207ENST00000554927 GREM2Q9H772 168 aa17.02■□□□□ 0.32
TUBB3-207ENST00000554927 COLQQ9Y215 455 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-207ENST00000554927 LEMD3Q9Y2U8 911 aa17.02■□□□□ 0.32
TUBB3-207ENST00000554927 COL1A1P02452 1464 aaPredicted RBP17.01■□□□□ 0.31
TUBB3-207ENST00000554927 KCNJ4P48050 445 aa17.01■□□□□ 0.31
TUBB3-207ENST00000554927 TTLL11Q8NHH1 800 aa17.01■□□□□ 0.31
TUBB3-207ENST00000554927 ZNF804BA4D1E1 1349 aa17■□□□□ 0.31
TUBB3-207ENST00000554927 MYO1BO43795 1136 aa17■□□□□ 0.31
TUBB3-207ENST00000554927 KLRK1P26718 216 aa17■□□□□ 0.31
TUBB3-207ENST00000554927 IREB2P48200 963 aaKnown RBP17■□□□□ 0.31
TUBB3-207ENST00000554927 MAP3K11Q16584 847 aa17■□□□□ 0.31
TUBB3-207ENST00000554927 SLC4A8Q2Y0W8 1093 aa17■□□□□ 0.31
TUBB3-207ENST00000554927 SUPT20HL1Q3ZLR7 823 aa17■□□□□ 0.31
TUBB3-207ENST00000554927 ZBED3Q96IU2 234 aaPredicted RBP17■□□□□ 0.31
TUBB3-207ENST00000554927 VEZTQ9HBM0 779 aa17■□□□□ 0.31
TUBB3-207ENST00000554927 MAP3K2Q9Y2U5 619 aa17■□□□□ 0.31
TUBB3-207ENST00000554927 PPP2R3BQ9Y5P8 575 aa17■□□□□ 0.31
TUBB3-207ENST00000554927 CLRN2A0PK11 232 aa16.99■□□□□ 0.31
TUBB3-207ENST00000554927 MYCP01106 439 aaPredicted RBP16.99■□□□□ 0.31
TUBB3-207ENST00000554927 CALD1Q05682 793 aaKnown RBP16.99■□□□□ 0.31
TUBB3-207ENST00000554927 SLC9C1Q4G0N8 1177 aa16.99■□□□□ 0.31
TUBB3-207ENST00000554927 NBPF11Q86T75 865 aa16.99■□□□□ 0.31
TUBB3-207ENST00000554927 ANKRD2Q9GZV1 360 aa16.99■□□□□ 0.31
TUBB3-207ENST00000554927 HTTP42858 3142 aa16.99■□□□□ 0.31
TUBB3-207ENST00000554927 KIAA0100Q14667 2235 aaKnown RBP16.98■□□□□ 0.31
TUBB3-207ENST00000554927 F8W031 263 aaPredicted RBP16.98■□□□□ 0.31
TUBB3-207ENST00000554927 ARHGEF6Q15052 776 aa16.98■□□□□ 0.31
TUBB3-207ENST00000554927 ZNF333Q96JL9 665 aa16.98■□□□□ 0.31
TUBB3-207ENST00000554927 MPHOSPH8Q99549 860 aa16.98■□□□□ 0.31
TUBB3-207ENST00000554927 SSC5DA1L4H1 1573 aa16.98■□□□□ 0.31
TUBB3-207ENST00000554927 UNCXA6NJT0 531 aa16.97■□□□□ 0.31
TUBB3-207ENST00000554927 GJA5P36382 358 aa16.97■□□□□ 0.31
TUBB3-207ENST00000554927 NEXNQ0ZGT2 675 aa16.97■□□□□ 0.31
TUBB3-207ENST00000554927 NBPF12Q5TAG4 269 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms