RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PHLPP2Q6ZVD8 1323 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 KIF1CO43896 1103 aaKnown RBP18.18■□□□□ 0.5
SYNE3-203ENST00000554873 KCNJ6P48051 423 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 AACSQ86V21 672 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 ZKSCAN1P17029 563 aaPredicted RBP18.18■□□□□ 0.5
SYNE3-203ENST00000554873 TEFQ10587 303 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 GPATCH3Q96I76 525 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 FAM227BQ96M60 508 aa18.18■□□□□ 0.5
SYNE3-203ENST00000554873 SCAND2PQ9GZW5 306 aaPredicted RBP18.18■□□□□ 0.5
SYNE3-203ENST00000554873 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.18■□□□□ 0.5
SYNE3-203ENST00000554873 CORO7P57737 925 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 PROSER3Q2NL68 480 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 LARP1BQ659C4 914 aaKnown RBP18.17■□□□□ 0.5
SYNE3-203ENST00000554873 MPRIPQ6WCQ1 1025 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 MAP4K1Q92918 833 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 OSBPL5Q9H0X9 879 aaPredicted RBP18.17■□□□□ 0.5
SYNE3-203ENST00000554873 DBF4Q9UBU7 674 aaPredicted RBP18.17■□□□□ 0.5
SYNE3-203ENST00000554873 ALDH1L1O75891 902 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 CWF19L2Q2TBE0 894 aaKnown RBP18.17■□□□□ 0.5
SYNE3-203ENST00000554873 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 ERC1Q8IUD2 1116 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 ARFGAP3Q9NP61 516 aa18.17■□□□□ 0.5
SYNE3-203ENST00000554873 ANKARQ7Z5J8 1434 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 CPP00450 1065 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 KCNA6P17658 529 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 ETF1P62495 437 aaKnown RBP18.16■□□□□ 0.5
SYNE3-203ENST00000554873 MMS22LQ6ZRQ5 1243 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 CNPY4Q8N129 248 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 CEP89Q96ST8 783 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 IMPACTQ9P2X3 320 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 MED1Q15648 1581 aaPredicted RBP18.16■□□□□ 0.5
SYNE3-203ENST00000554873 NMIQ13287 307 aaPredicted RBP18.16■□□□□ 0.5
SYNE3-203ENST00000554873 E2F4Q16254 413 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 FAM173BQ6P4H8 233 aa18.16■□□□□ 0.5
SYNE3-203ENST00000554873 KSR2Q6VAB6 950 aa18.15■□□□□ 0.5
SYNE3-203ENST00000554873 FERMT3Q86UX7 667 aa18.15■□□□□ 0.5
SYNE3-203ENST00000554873 SASH1O94885 1247 aa18.15■□□□□ 0.5
SYNE3-203ENST00000554873 LRRFIP1Q32MZ4 808 aaKnown RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 ZNF530Q6P9A1 599 aaPredicted RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 CDC37L1Q7L3B6 337 aa18.15■□□□□ 0.5
SYNE3-203ENST00000554873 GPR161Q8N6U8 529 aaKnown RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 SYTL4Q96C24 671 aaPredicted RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 EAF2Q96CJ1 260 aaPredicted RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 FUT8Q9BYC5 575 aa18.15■□□□□ 0.5
SYNE3-203ENST00000554873 ZSCAN16Q9H4T2 348 aaPredicted RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 MKRN1Q9UHC7 482 aaKnown RBP18.15■□□□□ 0.5
SYNE3-203ENST00000554873 BECN2A8MW95 431 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 SLC27A2O14975 620 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 NR1I2O75469 434 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 EVCP57679 992 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 AKAP4Q5JQC9 854 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 HOMER1Q86YM7 354 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 CCDC150Q8NCX0 1101 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 SPATA32Q96LK8 384 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 CCDC8Q9H0W5 538 aaPredicted RBP18.14■□□□□ 0.5
SYNE3-203ENST00000554873 MED4Q9NPJ6 270 aa18.14■□□□□ 0.5
SYNE3-203ENST00000554873 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.49
SYNE3-203ENST00000554873 DNAI1Q9UI46 699 aa18.14■□□□□ 0.49
SYNE3-203ENST00000554873 KDM3BQ7LBC6 1761 aa18.14■□□□□ 0.49
SYNE3-203ENST00000554873 SLIT1O75093 1534 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 C11orf57Q6ZUT1 292 aaPredicted RBP18.13■□□□□ 0.49
SYNE3-203ENST00000554873 LRRC59Q96AG4 307 aaKnown RBP18.13■□□□□ 0.49
SYNE3-203ENST00000554873 KAZALD1Q96I82 304 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 TCEANC2Q96MN5 208 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 CARD6Q9BX69 1037 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 H3BQF6 201 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 CCP110O43303 1012 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 NRDCO43847 1150 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 GIGYF1O75420 1035 aaPredicted RBP18.13■□□□□ 0.49
SYNE3-203ENST00000554873 SATB1Q01826 763 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 STX1AQ16623 288 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 PRAMEF22A3QJZ6 481 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 PSMA5P28066 241 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 SUCLG2Q96I99 432 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 TAF6LQ9Y6J9 622 aa18.13■□□□□ 0.49
SYNE3-203ENST00000554873 ATP6V1AP38606 617 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 DHX8Q14562 1220 aaKnown RBP18.12■□□□□ 0.49
SYNE3-203ENST00000554873 BICD2Q8TD16 824 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 SUFUQ9UMX1 484 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 A0A0D9SFI3 127 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 HIP1O00291 1037 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 SMC2O95347 1197 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 EFCAB13Q8IY85 973 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 CEP120Q8N960 986 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 LEO1Q8WVC0 666 aaPredicted RBP18.12■□□□□ 0.49
SYNE3-203ENST00000554873 SNRKQ9NRH2 765 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 TLR7Q9NYK1 1049 aaKnown RBP18.12■□□□□ 0.49
SYNE3-203ENST00000554873 USP54Q70EL1 1684 aa18.12■□□□□ 0.49
SYNE3-203ENST00000554873 RNMTO43148 476 aaKnown RBP18.11■□□□□ 0.49
SYNE3-203ENST00000554873 URI1O94763 535 aaPredicted RBP18.11■□□□□ 0.49
SYNE3-203ENST00000554873 MAP2K2P36507 400 aa18.11■□□□□ 0.49
SYNE3-203ENST00000554873 G3BP1Q13283 466 aaKnown RBP eCLIP18.11■□□□□ 0.49
SYNE3-203ENST00000554873 PLEKHO1Q53GL0 409 aaPredicted RBP18.11■□□□□ 0.49
SYNE3-203ENST00000554873 ANKRD20A12PQ8NF67 263 aa18.11■□□□□ 0.49
SYNE3-203ENST00000554873 BOLA2Q9H3K6 86 aa18.11■□□□□ 0.49
SYNE3-203ENST00000554873 FOXR1Q6PIV2 292 aa18.11■□□□□ 0.49
SYNE3-203ENST00000554873 BICC1Q9H694 974 aaKnown RBP18.11■□□□□ 0.49
SYNE3-203ENST00000554873 PHF8Q9UPP1 1060 aa18.11■□□□□ 0.49
SYNE3-203ENST00000554873 LTN1O94822 1766 aa18.11■□□□□ 0.49
SYNE3-203ENST00000554873 GRM8O00222 908 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms