RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 RASSF4Q9H2L5 321 aa8.48□□□□□ -1.05
CHD8-207ENST00000554384 DZANK1Q9NVP4 752 aa8.48□□□□□ -1.05
CHD8-207ENST00000554384 NFKBIEO00221 500 aa8.47□□□□□ -1.05
CHD8-207ENST00000554384 USP17L7P0C7H9 530 aa8.47□□□□□ -1.05
CHD8-207ENST00000554384 BCRP11274 1271 aa8.47□□□□□ -1.05
CHD8-207ENST00000554384 SPRED3Q2MJR0 410 aa8.47□□□□□ -1.05
CHD8-207ENST00000554384 TCF12Q99081 682 aa8.47□□□□□ -1.05
CHD8-207ENST00000554384 EFCC1Q9HA90 598 aa8.47□□□□□ -1.05
CHD8-207ENST00000554384 ENAMQ9NRM1 1142 aa8.47□□□□□ -1.05
CHD8-207ENST00000554384 GGA1Q9UJY5 639 aa8.47□□□□□ -1.05
CHD8-207ENST00000554384 NAGPAQ9UK23 515 aa8.47□□□□□ -1.05
CHD8-207ENST00000554384 SIN3BO75182 1162 aa8.46□□□□□ -1.06
CHD8-207ENST00000554384 ITGB2P05107 769 aa8.46□□□□□ -1.06
CHD8-207ENST00000554384 HOXD8P13378 290 aaPredicted RBP8.46□□□□□ -1.06
CHD8-207ENST00000554384 FCGRTP55899 365 aa8.46□□□□□ -1.06
CHD8-207ENST00000554384 HDLBPQ00341 1268 aaKnown RBP8.46□□□□□ -1.06
CHD8-207ENST00000554384 XP32Q5T750 250 aa8.46□□□□□ -1.06
CHD8-207ENST00000554384 FAM35AQ86V20 835 aa8.46□□□□□ -1.06
CHD8-207ENST00000554384 FRMD6Q96NE9 622 aa8.46□□□□□ -1.06
CHD8-207ENST00000554384 LIN7BQ9HAP6 207 aa8.46□□□□□ -1.06
CHD8-207ENST00000554384 SLC6A14Q9UN76 642 aa8.46□□□□□ -1.06
CHD8-207ENST00000554384 EIF2AK2P19525 551 aaKnown RBP8.45□□□□□ -1.06
CHD8-207ENST00000554384 ADH7P40394 386 aa8.45□□□□□ -1.06
CHD8-207ENST00000554384 GRIA4P48058 902 aa8.45□□□□□ -1.06
CHD8-207ENST00000554384 PERM1Q5SV97 790 aa8.45□□□□□ -1.06
CHD8-207ENST00000554384 DCAF5Q96JK2 942 aa8.45□□□□□ -1.06
CHD8-207ENST00000554384 ARAFP10398 606 aa8.44□□□□□ -1.06
CHD8-207ENST00000554384 ADH6P28332 368 aa8.44□□□□□ -1.06
CHD8-207ENST00000554384 PLA2G4EQ3MJ16 856 aa8.44□□□□□ -1.06
CHD8-207ENST00000554384 C1orf229Q6ZS94 237 aaPredicted RBP8.44□□□□□ -1.06
CHD8-207ENST00000554384 CCNJLQ8IV13 435 aa8.44□□□□□ -1.06
CHD8-207ENST00000554384 NXPE3Q969Y0 559 aa8.44□□□□□ -1.06
CHD8-207ENST00000554384 SPACA7Q96KW9 195 aa8.44□□□□□ -1.06
CHD8-207ENST00000554384 POP1Q99575 1024 aaKnown RBP8.44□□□□□ -1.06
CHD8-207ENST00000554384 MDFIQ99750 246 aa8.44□□□□□ -1.06
CHD8-207ENST00000554384 PBX4Q9BYU1 374 aa8.44□□□□□ -1.06
CHD8-207ENST00000554384 BCL11AQ9H165 835 aa8.44□□□□□ -1.06
CHD8-207ENST00000554384 ABCB6Q9NP58 842 aa8.44□□□□□ -1.06
CHD8-207ENST00000554384 TMEM238LA0A1B0GVL6 79 aa8.43□□□□□ -1.06
CHD8-207ENST00000554384 SCAMP3O14828 347 aaKnown RBP8.43□□□□□ -1.06
CHD8-207ENST00000554384 GIPC1O14908 333 aa8.43□□□□□ -1.06
CHD8-207ENST00000554384 GHRHP01286 108 aa8.43□□□□□ -1.06
CHD8-207ENST00000554384 FANCCQ00597 558 aa8.43□□□□□ -1.06
CHD8-207ENST00000554384 C3orf58Q8NDZ4 430 aa8.43□□□□□ -1.06
CHD8-207ENST00000554384 NEDD1Q8NHV4 660 aa8.43□□□□□ -1.06
CHD8-207ENST00000554384 TNFRSF25Q93038 417 aa8.43□□□□□ -1.06
CHD8-207ENST00000554384 CRELD1Q96HD1 420 aa8.43□□□□□ -1.06
CHD8-207ENST00000554384 OXCT2Q9BYC2 517 aaPredicted RBP8.43□□□□□ -1.06
CHD8-207ENST00000554384 FAM8A1Q9UBU6 413 aa8.43□□□□□ -1.06
CHD8-207ENST00000554384 AKAP2Q9Y2D5 859 aa8.43□□□□□ -1.06
CHD8-207ENST00000554384 PDE2AO00408 941 aaPredicted RBP8.42□□□□□ -1.06
CHD8-207ENST00000554384 FBXO24O75426 580 aa8.42□□□□□ -1.06
CHD8-207ENST00000554384 MAP2K3P46734 347 aa8.42□□□□□ -1.06
CHD8-207ENST00000554384 CEP135Q66GS9 1140 aa8.42□□□□□ -1.06
CHD8-207ENST00000554384 METTL16Q86W50 562 aaKnown RBP8.42□□□□□ -1.06
CHD8-207ENST00000554384 BEND7Q8N7W2 519 aaPredicted RBP8.42□□□□□ -1.06
CHD8-207ENST00000554384 ASAP3Q8TDY4 903 aa8.42□□□□□ -1.06
CHD8-207ENST00000554384 NUDT8Q8WV74 236 aa8.42□□□□□ -1.06
CHD8-207ENST00000554384 PLD4Q96BZ4 506 aa8.42□□□□□ -1.06
CHD8-207ENST00000554384 SMG9Q9H0W8 520 aaKnown RBP8.42□□□□□ -1.06
CHD8-207ENST00000554384 LPIN3Q9BQK8 851 aa8.41□□□□□ -1.06
CHD8-207ENST00000554384 LACRTQ9GZZ8 138 aa8.41□□□□□ -1.06
CHD8-207ENST00000554384 NSFL1CQ9UNZ2 370 aaKnown RBP8.41□□□□□ -1.06
CHD8-207ENST00000554384 TRIM33Q9UPN9 1127 aa8.41□□□□□ -1.06
CHD8-207ENST00000554384 TRAK1Q9UPV9 953 aa8.41□□□□□ -1.06
CHD8-207ENST00000554384 STARD13Q9Y3M8 1113 aa8.41□□□□□ -1.06
CHD8-207ENST00000554384 USP31Q70CQ4 1352 aa8.4□□□□□ -1.06
CHD8-207ENST00000554384 ADARB2-AS1A8MUL3 147 aa8.4□□□□□ -1.06
CHD8-207ENST00000554384 F6X3S4 739 aa8.4□□□□□ -1.06
CHD8-207ENST00000554384 OIP5O43482 229 aa8.4□□□□□ -1.06
CHD8-207ENST00000554384 ZNF76P36508 570 aa8.4□□□□□ -1.06
CHD8-207ENST00000554384 TAF1CQ15572 869 aaPredicted RBP8.4□□□□□ -1.06
CHD8-207ENST00000554384 PSAPL1Q6NUJ1 521 aa8.4□□□□□ -1.06
CHD8-207ENST00000554384 PRPF40BQ6NWY9 871 aaKnown RBP8.4□□□□□ -1.06
CHD8-207ENST00000554384 ELMSAN1Q6PJG2 1045 aa8.4□□□□□ -1.06
CHD8-207ENST00000554384 DTHD1Q6ZMT9 781 aa8.4□□□□□ -1.06
CHD8-207ENST00000554384 TMEM102Q8N9M5 508 aaPredicted RBP8.4□□□□□ -1.06
CHD8-207ENST00000554384 MUC3BQ9H195 1237 aa8.4□□□□□ -1.06
CHD8-207ENST00000554384 AVENQ9NQS1 362 aaPredicted RBP8.4□□□□□ -1.06
CHD8-207ENST00000554384 SH2B1Q9NRF2 756 aaPredicted RBP8.4□□□□□ -1.06
CHD8-207ENST00000554384 ELOA3CA0A087WX78 387 aaPredicted RBP8.39□□□□□ -1.07
CHD8-207ENST00000554384 A0A096LPE4 126 aa8.39□□□□□ -1.07
CHD8-207ENST00000554384 A0A1W2PPZ6 126 aa8.39□□□□□ -1.07
CHD8-207ENST00000554384 ELOA3DA6NLF2 546 aaPredicted RBP8.39□□□□□ -1.07
CHD8-207ENST00000554384 GSTT1P30711 240 aa8.39□□□□□ -1.07
CHD8-207ENST00000554384 ZNF157P51786 506 aaPredicted RBP8.39□□□□□ -1.07
CHD8-207ENST00000554384 ELOA3BQ3SY89 546 aa8.39□□□□□ -1.07
CHD8-207ENST00000554384 C8orf86Q6ZUL3 223 aa8.39□□□□□ -1.07
CHD8-207ENST00000554384 NT5DC4Q86YG4 428 aa8.39□□□□□ -1.07
CHD8-207ENST00000554384 ELOA3Q8NG57 546 aa8.39□□□□□ -1.07
CHD8-207ENST00000554384 SPOCK3Q9BQ16 436 aa8.39□□□□□ -1.07
CHD8-207ENST00000554384 TRIM56Q9BRZ2 755 aaKnown RBP8.39□□□□□ -1.07
CHD8-207ENST00000554384 BHLHE41Q9C0J9 482 aaPredicted RBP8.39□□□□□ -1.07
CHD8-207ENST00000554384 PPP4R2Q9NY27 417 aa8.39□□□□□ -1.07
CHD8-207ENST00000554384 TTF2Q9UNY4 1162 aaKnown RBP8.39□□□□□ -1.07
CHD8-207ENST00000554384 MSTNO14793 375 aa8.38□□□□□ -1.07
CHD8-207ENST00000554384 CDC25BP30305 580 aa8.38□□□□□ -1.07
CHD8-207ENST00000554384 SNRPNP63162 240 aaKnown RBP8.38□□□□□ -1.07
CHD8-207ENST00000554384 RAD51AP2Q09MP3 1159 aa8.38□□□□□ -1.07
CHD8-207ENST00000554384 FAAP100Q0VG06 881 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms