RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 CDK11BP21127 795 aaKnown RBP13.36□□□□□ -0.27
PTPN21-205ENST00000554270 ZSCAN25Q6NSZ9 544 aa13.36□□□□□ -0.27
PTPN21-205ENST00000554270 HMG20BQ9P0W2 317 aa13.36□□□□□ -0.27
PTPN21-205ENST00000554270 METTL24Q5JXM2 366 aa13.36□□□□□ -0.27
PTPN21-205ENST00000554270 CLSTN2Q9H4D0 955 aa13.36□□□□□ -0.27
PTPN21-205ENST00000554270 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
PTPN21-205ENST00000554270 KLF18A0A0U1RQI7 1052 aa13.35□□□□□ -0.27
PTPN21-205ENST00000554270 ATP5JP18859 108 aa13.35□□□□□ -0.27
PTPN21-205ENST00000554270 ADORA1P30542 326 aa13.35□□□□□ -0.27
PTPN21-205ENST00000554270 GTF3C6Q969F1 213 aa13.35□□□□□ -0.27
PTPN21-205ENST00000554270 IQSEC3Q9UPP2 1182 aaPredicted RBP13.35□□□□□ -0.27
PTPN21-205ENST00000554270 DHX32Q7L7V1 743 aaKnown RBP13.35□□□□□ -0.27
PTPN21-205ENST00000554270 MICU3Q86XE3 530 aa13.35□□□□□ -0.27
PTPN21-205ENST00000554270 DCAF5Q96JK2 942 aa13.35□□□□□ -0.27
PTPN21-205ENST00000554270 NAT10Q9H0A0 1025 aaKnown RBP13.35□□□□□ -0.27
PTPN21-205ENST00000554270 KBTBD3Q8NAB2 608 aa13.34□□□□□ -0.27
PTPN21-205ENST00000554270 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
PTPN21-205ENST00000554270 STX1AQ16623 288 aa13.34□□□□□ -0.27
PTPN21-205ENST00000554270 CFAP100Q494V2 611 aa13.34□□□□□ -0.27
PTPN21-205ENST00000554270 STOX1Q6ZVD7 989 aa13.34□□□□□ -0.27
PTPN21-205ENST00000554270 ANO10Q9NW15 660 aa13.34□□□□□ -0.27
PTPN21-205ENST00000554270 CCDC144BQ3MJ40 725 aa13.34□□□□□ -0.27
PTPN21-205ENST00000554270 LDHAL6AQ6ZMR3 332 aa13.34□□□□□ -0.27
PTPN21-205ENST00000554270 SPECC1Q5M775 1068 aa13.33□□□□□ -0.28
PTPN21-205ENST00000554270 ZNF710Q8N1W2 664 aa13.33□□□□□ -0.28
PTPN21-205ENST00000554270 TMEM87AQ8NBN3 555 aa13.33□□□□□ -0.28
PTPN21-205ENST00000554270 MYL10Q9BUA6 226 aa13.33□□□□□ -0.28
PTPN21-205ENST00000554270 IFNKQ9P0W0 207 aa13.33□□□□□ -0.28
PTPN21-205ENST00000554270 MON2Q7Z3U7 1717 aa13.33□□□□□ -0.28
PTPN21-205ENST00000554270 RGPD8O14715 1765 aaPredicted RBP13.33□□□□□ -0.28
PTPN21-205ENST00000554270 IMMTQ16891 758 aaKnown RBP13.33□□□□□ -0.28
PTPN21-205ENST00000554270 ZCRB1Q8TBF4 217 aaKnown RBP13.33□□□□□ -0.28
PTPN21-205ENST00000554270 COPRSQ9NQ92 184 aa13.33□□□□□ -0.28
PTPN21-205ENST00000554270 E7EWF7 191 aa13.32□□□□□ -0.28
PTPN21-205ENST00000554270 SNAP23O00161 211 aa13.32□□□□□ -0.28
PTPN21-205ENST00000554270 PES1O00541 588 aaKnown RBP13.32□□□□□ -0.28
PTPN21-205ENST00000554270 MNS1Q8NEH6 495 aa13.32□□□□□ -0.28
PTPN21-205ENST00000554270 USP27XA6NNY8 438 aa13.32□□□□□ -0.28
PTPN21-205ENST00000554270 HSPD1P10809 573 aaKnown RBP13.32□□□□□ -0.28
PTPN21-205ENST00000554270 SFPQP23246 707 aaKnown RBP eCLIP13.32□□□□□ -0.28
PTPN21-205ENST00000554270 IFIT5Q13325 482 aaKnown RBP13.32□□□□□ -0.28
PTPN21-205ENST00000554270 TRIM29Q14134 588 aa13.32□□□□□ -0.28
PTPN21-205ENST00000554270 MTMR7Q9Y216 660 aa13.32□□□□□ -0.28
PTPN21-205ENST00000554270 SLC3A2P08195 630 aaKnown RBP13.32□□□□□ -0.28
PTPN21-205ENST00000554270 PLBD2Q8NHP8 589 aa13.32□□□□□ -0.28
PTPN21-205ENST00000554270 ZSWIM4Q9H7M6 989 aa13.32□□□□□ -0.28
PTPN21-205ENST00000554270 TBC1D2BQ9UPU7 963 aa13.32□□□□□ -0.28
PTPN21-205ENST00000554270 ZAP70P43403 619 aa13.31□□□□□ -0.28
PTPN21-205ENST00000554270 GOLGA8FQ08AF8 430 aa13.31□□□□□ -0.28
PTPN21-205ENST00000554270 GOLGA8DPQ0D2H9 430 aa13.31□□□□□ -0.28
PTPN21-205ENST00000554270 CGNQ9P2M7 1197 aaKnown RBP13.31□□□□□ -0.28
PTPN21-205ENST00000554270 ZNF213O14771 459 aa13.31□□□□□ -0.28
PTPN21-205ENST00000554270 PRC1O43663 620 aa13.31□□□□□ -0.28
PTPN21-205ENST00000554270 NUP133Q8WUM0 1156 aa13.31□□□□□ -0.28
PTPN21-205ENST00000554270 ZSCAN16Q9H4T2 348 aaPredicted RBP13.31□□□□□ -0.28
PTPN21-205ENST00000554270 REREQ9P2R6 1566 aa13.31□□□□□ -0.28
PTPN21-205ENST00000554270 NBPF26B4DH59 902 aa13.31□□□□□ -0.28
PTPN21-205ENST00000554270 NBPF14Q5TI25 921 aa13.31□□□□□ -0.28
PTPN21-205ENST00000554270 NBPF10Q6P3W6 841 aaKnown RBP13.31□□□□□ -0.28
PTPN21-205ENST00000554270 SYT10Q6XYQ8 523 aa13.31□□□□□ -0.28
PTPN21-205ENST00000554270 KIF6Q6ZMV9 814 aa13.31□□□□□ -0.28
PTPN21-205ENST00000554270 NBPF15Q8N660 670 aa13.31□□□□□ -0.28
PTPN21-205ENST00000554270 HAUS7Q99871 368 aa13.31□□□□□ -0.28
PTPN21-205ENST00000554270 EYA2O00167 538 aa13.3□□□□□ -0.28
PTPN21-205ENST00000554270 URI1O94763 535 aaPredicted RBP13.3□□□□□ -0.28
PTPN21-205ENST00000554270 IL15P40933 162 aaPredicted RBP13.3□□□□□ -0.28
PTPN21-205ENST00000554270 KIF18AQ8NI77 898 aa13.3□□□□□ -0.28
PTPN21-205ENST00000554270 RNF113AO15541 343 aaKnown RBP13.3□□□□□ -0.28
PTPN21-205ENST00000554270 EPB41L2O43491 1005 aaKnown RBP13.3□□□□□ -0.28
PTPN21-205ENST00000554270 ELF2Q15723 593 aa13.3□□□□□ -0.28
PTPN21-205ENST00000554270 SLC9C2Q5TAH2 1124 aa13.3□□□□□ -0.28
PTPN21-205ENST00000554270 CPLX2Q6PUV4 134 aaKnown RBP13.3□□□□□ -0.28
PTPN21-205ENST00000554270 AIFM3Q96NN9 605 aa13.3□□□□□ -0.28
PTPN21-205ENST00000554270 TMOD3Q9NYL9 352 aa13.3□□□□□ -0.28
PTPN21-205ENST00000554270 ZNF215Q9UL58 517 aaPredicted RBP13.3□□□□□ -0.28
PTPN21-205ENST00000554270 KLHL10Q6JEL2 608 aa13.3□□□□□ -0.28
PTPN21-205ENST00000554270 MRPS27Q92552 414 aaKnown RBP13.3□□□□□ -0.28
PTPN21-205ENST00000554270 PHKBQ93100 1093 aa13.3□□□□□ -0.28
PTPN21-205ENST00000554270 OSBP2Q969R2 916 aa13.3□□□□□ -0.28
PTPN21-205ENST00000554270 XAGE2Q96GT9 111 aa13.3□□□□□ -0.28
PTPN21-205ENST00000554270 ZKSCAN3Q9BRR0 538 aa13.3□□□□□ -0.28
PTPN21-205ENST00000554270 M0R2C6 588 aa13.29□□□□□ -0.28
PTPN21-205ENST00000554270 POLR3GO15318 223 aaPredicted RBP13.29□□□□□ -0.28
PTPN21-205ENST00000554270 CPLX3Q8WVH0 158 aa13.29□□□□□ -0.28
PTPN21-205ENST00000554270 INCENPQ9NQS7 918 aa13.29□□□□□ -0.28
PTPN21-205ENST00000554270 TRMT112Q9UI30 125 aaKnown RBP13.29□□□□□ -0.28
PTPN21-205ENST00000554270 SLC4A8Q2Y0W8 1093 aa13.29□□□□□ -0.28
PTPN21-205ENST00000554270 DNAJC10Q8IXB1 793 aa13.29□□□□□ -0.28
PTPN21-205ENST00000554270 NSUN7Q8NE18 718 aaKnown RBP13.29□□□□□ -0.28
PTPN21-205ENST00000554270 SNW1Q13573 536 aaKnown RBP13.29□□□□□ -0.28
PTPN21-205ENST00000554270 DNAI1Q9UI46 699 aa13.29□□□□□ -0.28
PTPN21-205ENST00000554270 GOLPH3LQ9H4A5 285 aa13.29□□□□□ -0.28
PTPN21-205ENST00000554270 MAST3O60307 1309 aa13.28□□□□□ -0.28
PTPN21-205ENST00000554270 SCARF1Q14162 830 aa13.28□□□□□ -0.28
PTPN21-205ENST00000554270 CMTR1Q8N1G2 835 aaKnown RBP13.28□□□□□ -0.28
PTPN21-205ENST00000554270 DENND2AQ9ULE3 1009 aa13.28□□□□□ -0.28
PTPN21-205ENST00000554270 CLIC4Q9Y696 253 aa13.28□□□□□ -0.28
PTPN21-205ENST00000554270 ADD1P35611 737 aaKnown RBP13.28□□□□□ -0.28
PTPN21-205ENST00000554270 RESTQ13127 1097 aa13.28□□□□□ -0.28
PTPN21-205ENST00000554270 ZNF609O15014 1411 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms