RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ASTN2O75129 1339 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 UBN2Q6ZU65 1347 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 CNTNAP4Q9C0A0 1308 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 PPP1R12BO60237 982 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 PDE8AO60658 829 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 EGFRP00533 1210 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 NBPF7P0C2Y1 421 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 BCAMP50895 628 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 KIF4BQ2VIQ3 1234 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 NBPF9Q3BBW0 867 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 SOGA3Q5TF21 947 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 IFFO2Q5TF58 517 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 PODNQ7Z5L7 613 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 CCDC84Q86UT8 332 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 CAPNS2Q96L46 248 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 FEZ1Q99689 392 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 ZNRF3Q9ULT6 936 aa3.1□□□□□ -1.91
PRPF39-205ENST00000554081 CTDP1Q9Y5B0 961 aaPredicted RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 LRRFIP2Q9Y608 721 aaKnown RBP3.1□□□□□ -1.91
PRPF39-205ENST00000554081 ABCC4O15439 1325 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 FANCIQ9NVI1 1328 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 TRIM6-TRIM34B2RNG4 842 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 IPO8O15397 1037 aaKnown RBP3.09□□□□□ -1.91
PRPF39-205ENST00000554081 DHX16O60231 1041 aaKnown RBP3.09□□□□□ -1.91
PRPF39-205ENST00000554081 BBOX1O75936 387 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 TBC1D8O95759 1140 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 KLRK1P26718 216 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 TM4SF1P30408 202 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 PLS1Q14651 629 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 CLEC4GQ6UXB4 293 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 NOL8Q76FK4 1167 aaKnown RBP3.09□□□□□ -1.91
PRPF39-205ENST00000554081 SUPT20HQ8NEM7 779 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 TRPM4Q8TD43 1214 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 SMCR8Q8TEV9 937 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-205ENST00000554081 VTI1AQ96AJ9 217 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 TAF1DQ9H5J8 278 aaPredicted RBP3.09□□□□□ -1.91
PRPF39-205ENST00000554081 BRCA2P51587 3418 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 NSD2O96028 1365 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 NCOR1O75376 2440 aa3.09□□□□□ -1.91
PRPF39-205ENST00000554081 KDM6AO15550 1401 aaPredicted RBP3.09□□□□□ -1.92
PRPF39-205ENST00000554081 TMEM88BA6NKF7 163 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 GRM8O00222 908 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 KIF3CO14782 793 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 CSPG5O95196 566 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 CCT4P50991 539 aaKnown RBP3.09□□□□□ -1.92
PRPF39-205ENST00000554081 APLP1P51693 650 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 CHRNDQ07001 517 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 DGKZQ13574 1117 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 GRAPQ13588 217 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 SCARF1Q14162 830 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 DIXDC1Q155Q3 683 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 LRRC24Q50LG9 513 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 RRP12Q5JTH9 1297 aaKnown RBP3.09□□□□□ -1.92
PRPF39-205ENST00000554081 CDC37L1Q7L3B6 337 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 TRMT1LQ7Z2T5 733 aaKnown RBP3.09□□□□□ -1.92
PRPF39-205ENST00000554081 PNMA8AQ86V59 439 aaPredicted RBP3.09□□□□□ -1.92
PRPF39-205ENST00000554081 TXNRD3Q86VQ6 643 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 MIGA1Q8NAN2 632 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 GRAPLQ8TC17 118 aaPredicted RBP3.09□□□□□ -1.92
PRPF39-205ENST00000554081 POLLQ9UGP5 575 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 SAP30BPQ9UHR5 308 aaKnown RBP3.09□□□□□ -1.92
PRPF39-205ENST00000554081 PCDHAC2Q9Y5I4 1007 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 MKI67P46013 3256 aaKnown RBP3.09□□□□□ -1.92
PRPF39-205ENST00000554081 FMN2Q9NZ56 1722 aa3.09□□□□□ -1.92
PRPF39-205ENST00000554081 KCPQ6ZWJ8 1503 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 CHL1O00533 1208 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 CNGA1P29973 690 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 HIBADHP31937 336 aaKnown RBP3.08□□□□□ -1.92
PRPF39-205ENST00000554081 VEGFBP49765 207 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 CTSWP56202 376 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 TTC39AQ5SRH9 613 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 TSHZ3Q63HK5 1081 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 ZNF804AQ7Z570 1209 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 PAGR1Q9BTK6 254 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 METTL22Q9BUU2 404 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-205ENST00000554081 IRX2Q9BZI1 471 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-205ENST00000554081 BICC1Q9H694 974 aaKnown RBP3.08□□□□□ -1.92
PRPF39-205ENST00000554081 ELP3Q9H9T3 547 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 GNL3LQ9NVN8 582 aaKnown RBP3.08□□□□□ -1.92
PRPF39-205ENST00000554081 IFT57Q9NWB7 429 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 CSADQ9Y600 493 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 ABCC12Q96J65 1359 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 ZNF804BA4D1E1 1349 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 USP17L3A6NCW0 530 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 USP17L4A6NCW7 530 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 TRIM75PA6NK02 468 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 FMNL1O95466 1100 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-205ENST00000554081 IFIT2P09913 472 aaKnown RBP3.08□□□□□ -1.92
PRPF39-205ENST00000554081 SLURP2P0DP57 97 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 HOXB1P14653 301 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-205ENST00000554081 KCNA3P22001 575 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 USP5P45974 858 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 RGS3P49796 1198 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 GCKRQ14397 625 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 GADL1Q6ZQY3 521 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 USP17L1Q7RTZ2 530 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 ZBTB38Q8NAP3 1195 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-205ENST00000554081 TBC1D16Q8TBP0 767 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 PIBF1Q8WXW3 757 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 RILPL2Q969X0 211 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms