RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 RGMBQ6NW40 437 aa8.88□□□□□ -0.99
MTHFD1-205ENST00000554057 DPF2Q92785 391 aa8.88□□□□□ -0.99
MTHFD1-205ENST00000554057 FAM89AQ96GI7 184 aa8.88□□□□□ -0.99
MTHFD1-205ENST00000554057 SMC4Q9NTJ3 1288 aa8.88□□□□□ -0.99
MTHFD1-205ENST00000554057 BABAM1Q9NWV8 329 aa8.88□□□□□ -0.99
MTHFD1-205ENST00000554057 GGA3Q9NZ52 723 aa8.88□□□□□ -0.99
MTHFD1-205ENST00000554057 POLLQ9UGP5 575 aa8.88□□□□□ -0.99
MTHFD1-205ENST00000554057 PTMSP20962 102 aa8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 SOX10P56693 466 aa8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 KIF23Q02241 960 aaPredicted RBP8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 EXOSC9Q06265 439 aaKnown RBP8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 LMOD3Q0VAK6 560 aa8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 KIF4BQ2VIQ3 1234 aa8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 HDGFL1Q5TGJ6 251 aa8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 C2orf69Q8N8R5 385 aa8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 ARHGAP45Q92619 1136 aa8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 DCPSQ96C86 337 aaKnown RBP8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 ISCA1Q9BUE6 129 aa8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 TBC1D2Q9BYX2 928 aa8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 CHMP5Q9NZZ3 219 aa8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 ISY1Q9ULR0 285 aaKnown RBP8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 TRIM35Q9UPQ4 493 aa8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 AKAP11Q9UKA4 1901 aa8.87□□□□□ -0.99
MTHFD1-205ENST00000554057 TRPA1O75762 1119 aa8.86□□□□□ -0.99
MTHFD1-205ENST00000554057 RPS12P25398 132 aaKnown RBP8.86□□□□□ -0.99
MTHFD1-205ENST00000554057 ZNF157P51786 506 aaPredicted RBP8.86□□□□□ -0.99
MTHFD1-205ENST00000554057 SF3B3Q15393 1217 aaKnown RBP8.86□□□□□ -0.99
MTHFD1-205ENST00000554057 PLBD2Q8NHP8 589 aa8.86□□□□□ -0.99
MTHFD1-205ENST00000554057 TBC1D16Q8TBP0 767 aa8.86□□□□□ -0.99
MTHFD1-205ENST00000554057 C22orf23Q9BZE7 217 aa8.86□□□□□ -0.99
MTHFD1-205ENST00000554057 SAGE1Q9NXZ1 904 aa8.86□□□□□ -0.99
MTHFD1-205ENST00000554057 BRPF3Q9ULD4 1205 aa8.86□□□□□ -0.99
MTHFD1-205ENST00000554057 PSME4Q14997 1843 aa8.86□□□□□ -0.99
MTHFD1-205ENST00000554057 SPEF2Q9C093 1822 aa8.86□□□□□ -0.99
MTHFD1-205ENST00000554057 A0A1B0GUL6 1792 aa8.86□□□□□ -0.99
MTHFD1-205ENST00000554057 CHL1O00533 1208 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 IRS4O14654 1257 aaPredicted RBP8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 UFL1O94874 794 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 SLC10A3P09131 477 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 TRIM27P14373 513 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 ANKRD13DQ6ZTN6 518 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 SULF1Q8IWU6 871 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 SSH1Q8WYL5 1049 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 SNX21Q969T3 373 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 CCDC102AQ96A19 550 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 CDCA5Q96FF9 252 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 EYA3Q99504 573 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 SEC31BQ9NQW1 1179 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 ZBTB40Q9NUA8 1239 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 RNF186Q9NXI6 227 aa8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 CIZ1Q9ULV3 898 aaPredicted RBP8.85□□□□□ -0.99
MTHFD1-205ENST00000554057 PAPPA2Q9BXP8 1791 aa8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 VIL1P09327 827 aaKnown RBP8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 MCM4P33991 863 aa8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 RBM25P49756 843 aaKnown RBP8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 RPS8P62241 208 aaKnown RBP8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 NUCB1Q02818 461 aa8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 ANGEL2Q5VTE6 544 aaKnown RBP8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 RASAL3Q86YV0 1011 aa8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 ITPRIPQ8IWB1 547 aa8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 HSCBQ8IWL3 235 aa8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 GCC1Q96CN9 775 aa8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 CSRNP1Q96S65 589 aa8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 ZC3H12CQ9C0D7 883 aaKnown RBP8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 TNNQ9UQP3 1299 aa8.84□□□□□ -0.99
MTHFD1-205ENST00000554057 DDX11L8A8MPP1 907 aa8.83□□□□□ -1
MTHFD1-205ENST00000554057 G3V3G9 751 aa8.83□□□□□ -1
MTHFD1-205ENST00000554057 HOXB7P09629 217 aa8.83□□□□□ -1
MTHFD1-205ENST00000554057 DCAF8Q5TAQ9 597 aa8.83□□□□□ -1
MTHFD1-205ENST00000554057 CCDC85AQ96PX6 553 aaPredicted RBP8.83□□□□□ -1
MTHFD1-205ENST00000554057 PODXL2Q9NZ53 605 aa8.83□□□□□ -1
MTHFD1-205ENST00000554057 ANKIB1Q9P2G1 1089 aa8.83□□□□□ -1
MTHFD1-205ENST00000554057 DBF4Q9UBU7 674 aaPredicted RBP8.83□□□□□ -1
MTHFD1-205ENST00000554057 GGA1Q9UJY5 639 aa8.83□□□□□ -1
MTHFD1-205ENST00000554057 NOB1Q9ULX3 412 aaKnown RBP8.83□□□□□ -1
MTHFD1-205ENST00000554057 SCAF8Q9UPN6 1271 aaKnown RBP8.83□□□□□ -1
MTHFD1-205ENST00000554057 MYH3P11055 1940 aa8.83□□□□□ -1
MTHFD1-205ENST00000554057 ZNF609O15014 1411 aa8.82□□□□□ -1
MTHFD1-205ENST00000554057 FSD2A1L4K1 749 aa8.82□□□□□ -1
MTHFD1-205ENST00000554057 ZNF280AP59817 542 aaPredicted RBP8.82□□□□□ -1
MTHFD1-205ENST00000554057 SCARF1Q14162 830 aa8.82□□□□□ -1
MTHFD1-205ENST00000554057 BMP2KLQ5H9B9 411 aa8.82□□□□□ -1
MTHFD1-205ENST00000554057 RSBN1LQ6PCB5 846 aaPredicted RBP8.82□□□□□ -1
MTHFD1-205ENST00000554057 MOB2Q70IA6 237 aa8.82□□□□□ -1
MTHFD1-205ENST00000554057 CTU1Q7Z7A3 348 aaKnown RBP8.82□□□□□ -1
MTHFD1-205ENST00000554057 JARID2Q92833 1246 aaPredicted RBP8.82□□□□□ -1
MTHFD1-205ENST00000554057 TSR2Q969E8 191 aaKnown RBP8.82□□□□□ -1
MTHFD1-205ENST00000554057 SLKQ9H2G2 1235 aaPredicted RBP8.82□□□□□ -1
MTHFD1-205ENST00000554057 HYPKQ9NX55 129 aa8.82□□□□□ -1
MTHFD1-205ENST00000554057 GOLGA6L3A6NEY3 463 aa8.81□□□□□ -1
MTHFD1-205ENST00000554057 GNAI1P63096 354 aa8.81□□□□□ -1
MTHFD1-205ENST00000554057 TRIM28Q13263 835 aaKnown RBP8.81□□□□□ -1
MTHFD1-205ENST00000554057 CCDC152Q4G0S7 254 aa8.81□□□□□ -1
MTHFD1-205ENST00000554057 RIC3Q7Z5B4 369 aa8.81□□□□□ -1
MTHFD1-205ENST00000554057 TMEM57Q8N5G2 664 aa8.81□□□□□ -1
MTHFD1-205ENST00000554057 ZBTB38Q8NAP3 1195 aaPredicted RBP8.81□□□□□ -1
MTHFD1-205ENST00000554057 AGBL3Q8NEM8 1001 aa8.81□□□□□ -1
MTHFD1-205ENST00000554057 MYD88Q99836 296 aa8.81□□□□□ -1
MTHFD1-205ENST00000554057 PHAXQ9H814 394 aaKnown RBP8.81□□□□□ -1
MTHFD1-205ENST00000554057 MYOZ2Q9NPC6 264 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms