RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 EFCAB5A4FU69 1503 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 DIP2CQ9Y2E4 1556 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 ABCA6Q8N139 1617 aa5.36□□□□□ -1.55
SLIRP-202ENST00000553981 CDC42BPBQ9Y5S2 1711 aa5.35□□□□□ -1.55
SLIRP-202ENST00000553981 C3P01024 1663 aa5.35□□□□□ -1.55
SLIRP-202ENST00000553981 PREX1Q8TCU6 1659 aa5.35□□□□□ -1.55
SLIRP-202ENST00000553981 KDM5CP41229 1560 aa5.35□□□□□ -1.55
SLIRP-202ENST00000553981 MAGI2Q86UL8 1455 aa5.35□□□□□ -1.55
SLIRP-202ENST00000553981 ARSDP51689 593 aa5.35□□□□□ -1.55
SLIRP-202ENST00000553981 DTWD1Q8N5C7 304 aa5.35□□□□□ -1.55
SLIRP-202ENST00000553981 TRPM4Q8TD43 1214 aa5.35□□□□□ -1.55
SLIRP-202ENST00000553981 CALR3Q96L12 384 aaKnown RBP5.35□□□□□ -1.55
SLIRP-202ENST00000553981 ARXQ96QS3 562 aa5.35□□□□□ -1.55
SLIRP-202ENST00000553981 VRTNQ9H8Y1 702 aa5.35□□□□□ -1.55
SLIRP-202ENST00000553981 C9orf84Q5VXU9 1444 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 DISP3Q9P2K9 1392 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 FOXO3O43524 673 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 SASH3O75995 380 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 MICAL2O94851 1124 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 RARAP10276 462 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 LMOD1P29536 600 aaPredicted RBP5.34□□□□□ -1.55
SLIRP-202ENST00000553981 WEE1P30291 646 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 GPLD1P80108 840 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 MLLT1Q03111 559 aaPredicted RBP5.34□□□□□ -1.55
SLIRP-202ENST00000553981 ELMSAN1Q6PJG2 1045 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 FBXO11Q86XK2 927 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 WFDC12Q8WWY7 111 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 TTC9Q92623 222 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 C11orf16Q9NQ32 467 aa5.34□□□□□ -1.55
SLIRP-202ENST00000553981 CFAP74Q9C0B2 1584 aa5.33□□□□□ -1.56
SLIRP-202ENST00000553981 NOS3P29474 1203 aa5.33□□□□□ -1.56
SLIRP-202ENST00000553981 LRP8Q14114 963 aa5.33□□□□□ -1.56
SLIRP-202ENST00000553981 C11orf91Q3C1V1 193 aa5.33□□□□□ -1.56
SLIRP-202ENST00000553981 NBPF11Q86T75 865 aa5.33□□□□□ -1.56
SLIRP-202ENST00000553981 WFDC8Q8IUA0 241 aa5.33□□□□□ -1.56
SLIRP-202ENST00000553981 MYO19Q96H55 970 aa5.33□□□□□ -1.56
SLIRP-202ENST00000553981 USP20Q9Y2K6 914 aa5.33□□□□□ -1.56
SLIRP-202ENST00000553981 KIDINS220Q9ULH0 1771 aa5.33□□□□□ -1.56
SLIRP-202ENST00000553981 MYO5CQ9NQX4 1742 aa5.33□□□□□ -1.56
SLIRP-202ENST00000553981 OPLAHO14841 1288 aa5.32□□□□□ -1.56
SLIRP-202ENST00000553981 IREB2P48200 963 aaKnown RBP5.32□□□□□ -1.56
SLIRP-202ENST00000553981 HFE2Q6ZVN8 426 aa5.32□□□□□ -1.56
SLIRP-202ENST00000553981 SMG9Q9H0W8 520 aaKnown RBP5.32□□□□□ -1.56
SLIRP-202ENST00000553981 LRFN2Q9ULH4 789 aa5.32□□□□□ -1.56
SLIRP-202ENST00000553981 PTPRTO14522 1441 aa5.31□□□□□ -1.56
SLIRP-202ENST00000553981 REREQ9P2R6 1566 aa5.31□□□□□ -1.56
SLIRP-202ENST00000553981 A6NJR5 290 aa5.31□□□□□ -1.56
SLIRP-202ENST00000553981 HYAL3O43820 417 aaPredicted RBP5.31□□□□□ -1.56
SLIRP-202ENST00000553981 DEAF1O75398 565 aaPredicted RBP5.31□□□□□ -1.56
SLIRP-202ENST00000553981 EGFRP00533 1210 aa5.31□□□□□ -1.56
SLIRP-202ENST00000553981 NRLP54845 237 aa5.31□□□□□ -1.56
SLIRP-202ENST00000553981 IGF2-ASQ6U949 168 aa5.31□□□□□ -1.56
SLIRP-202ENST00000553981 VTI1AQ96AJ9 217 aa5.31□□□□□ -1.56
SLIRP-202ENST00000553981 MEGF10Q96KG7 1140 aa5.31□□□□□ -1.56
SLIRP-202ENST00000553981 TLR7Q9NYK1 1049 aaKnown RBP5.31□□□□□ -1.56
SLIRP-202ENST00000553981 RTCBQ9Y3I0 505 aaKnown RBP5.31□□□□□ -1.56
SLIRP-202ENST00000553981 SETD1BQ9UPS6 1966 aaKnown RBP5.31□□□□□ -1.56
SLIRP-202ENST00000553981 TROQ12816 1431 aaPredicted RBP5.31□□□□□ -1.56
SLIRP-202ENST00000553981 NCOA1Q15788 1441 aa5.31□□□□□ -1.56
SLIRP-202ENST00000553981 ITSN2Q9NZM3 1697 aa5.31□□□□□ -1.56
SLIRP-202ENST00000553981 ALKQ9UM73 1620 aa5.3□□□□□ -1.56
SLIRP-202ENST00000553981 SPATA31D1Q6ZQQ2 1576 aa5.3□□□□□ -1.56
SLIRP-202ENST00000553981 ZNF335Q9H4Z2 1342 aaPredicted RBP5.3□□□□□ -1.56
SLIRP-202ENST00000553981 ABCC1P33527 1531 aa5.3□□□□□ -1.56
SLIRP-202ENST00000553981 AGLP35573 1532 aa5.3□□□□□ -1.56
SLIRP-202ENST00000553981 DLL1O00548 723 aa5.3□□□□□ -1.56
SLIRP-202ENST00000553981 EIF2AK2P19525 551 aaKnown RBP5.3□□□□□ -1.56
SLIRP-202ENST00000553981 ARID4AP29374 1257 aaPredicted RBP5.3□□□□□ -1.56
SLIRP-202ENST00000553981 CFAP70Q5T0N1 1121 aa5.3□□□□□ -1.56
SLIRP-202ENST00000553981 EFCAB2Q5VUJ9 269 aa5.3□□□□□ -1.56
SLIRP-202ENST00000553981 MLH3Q9UHC1 1453 aa5.3□□□□□ -1.56
SLIRP-202ENST00000553981 UHRF1BP1Q6BDS2 1440 aa5.3□□□□□ -1.56
SLIRP-202ENST00000553981 SAMD9LQ8IVG5 1584 aa5.29□□□□□ -1.56
SLIRP-202ENST00000553981 ARHGAP5Q13017 1502 aa5.29□□□□□ -1.56
SLIRP-202ENST00000553981 CDC42BPAQ5VT25 1732 aa5.29□□□□□ -1.56
SLIRP-202ENST00000553981 ZNF518AQ6AHZ1 1483 aa5.29□□□□□ -1.56
SLIRP-202ENST00000553981 J3QW42 95 aa5.29□□□□□ -1.56
SLIRP-202ENST00000553981 XYLBO75191 536 aa5.29□□□□□ -1.56
SLIRP-202ENST00000553981 TREML1Q86YW5 311 aa5.29□□□□□ -1.56
SLIRP-202ENST00000553981 RGL4Q8IZJ4 473 aa5.29□□□□□ -1.56
SLIRP-202ENST00000553981 CMTR1Q8N1G2 835 aaKnown RBP5.29□□□□□ -1.56
SLIRP-202ENST00000553981 FAM200AQ8TCP9 573 aa5.29□□□□□ -1.56
SLIRP-202ENST00000553981 PLD4Q96BZ4 506 aa5.29□□□□□ -1.56
SLIRP-202ENST00000553981 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.29□□□□□ -1.566e-11■■■■■ 34.8
SLIRP-202ENST00000553981 CAMSAP1Q5T5Y3 1602 aa5.29□□□□□ -1.56
SLIRP-202ENST00000553981 PREX2Q70Z35 1606 aa5.29□□□□□ -1.56
SLIRP-202ENST00000553981 LOC102724428A0A0B4J2F2 783 aa5.28□□□□□ -1.56
SLIRP-202ENST00000553981 MMP20O60882 483 aa5.28□□□□□ -1.56
SLIRP-202ENST00000553981 SIK1P57059 783 aa5.28□□□□□ -1.56
SLIRP-202ENST00000553981 FKBP5Q13451 457 aaPredicted RBP5.28□□□□□ -1.56
SLIRP-202ENST00000553981 COX20Q5RI15 118 aa5.28□□□□□ -1.56
SLIRP-202ENST00000553981 PRR23CQ6ZRP0 262 aa5.28□□□□□ -1.56
SLIRP-202ENST00000553981 RNF112Q9ULX5 631 aa5.28□□□□□ -1.56
SLIRP-202ENST00000553981 KCNMB2Q9Y691 235 aa5.28□□□□□ -1.56
SLIRP-202ENST00000553981 EEA1Q15075 1411 aa5.28□□□□□ -1.56
SLIRP-202ENST00000553981 ZMYM3Q14202 1370 aa5.28□□□□□ -1.56
SLIRP-202ENST00000553981 ALX3O95076 343 aa5.27□□□□□ -1.57
SLIRP-202ENST00000553981 GHRHP01286 108 aa5.27□□□□□ -1.57
SLIRP-202ENST00000553981 PSAPP07602 524 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms