RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 KLRK1P26718 216 aa12.81□□□□□ -0.36
HNRNPC-208ENST00000553753 INTS3Q68E01 1043 aaKnown RBP12.81□□□□□ -0.36
HNRNPC-208ENST00000553753 ATF7IPQ6VMQ6 1270 aa12.81□□□□□ -0.36
HNRNPC-208ENST00000553753 USP17L1Q7RTZ2 530 aa12.81□□□□□ -0.36
HNRNPC-208ENST00000553753 HIRAP54198 1017 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-208ENST00000553753 RSBN1LQ6PCB5 846 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-208ENST00000553753 AGBL3Q8NEM8 1001 aa12.8□□□□□ -0.36
HNRNPC-208ENST00000553753 PUS3Q9BZE2 481 aaKnown RBP12.8□□□□□ -0.36
HNRNPC-208ENST00000553753 HDAC5Q9UQL6 1122 aa12.8□□□□□ -0.36
HNRNPC-208ENST00000553753 RIPOR2Q9Y4F9 1068 aa12.8□□□□□ -0.36
HNRNPC-208ENST00000553753 C15orf52Q6ZUT6 534 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-208ENST00000553753 SAMD7Q7Z3H4 446 aa12.79□□□□□ -0.36
HNRNPC-208ENST00000553753 TRPM4Q8TD43 1214 aa12.79□□□□□ -0.36
HNRNPC-208ENST00000553753 ZC3H15Q8WU90 426 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-208ENST00000553753 MROH5Q6ZUA9 1318 aa12.79□□□□□ -0.36
HNRNPC-208ENST00000553753 STRIP1Q5VSL9 837 aa12.79□□□□□ -0.36
HNRNPC-208ENST00000553753 ZKSCAN2Q63HK3 967 aa12.79□□□□□ -0.36
HNRNPC-208ENST00000553753 KLHDC4Q8TBB5 520 aa12.79□□□□□ -0.36
HNRNPC-208ENST00000553753 MEIS3Q99687 375 aa12.79□□□□□ -0.36
HNRNPC-208ENST00000553753 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
HNRNPC-208ENST00000553753 PGAP2Q9UHJ9 254 aa12.79□□□□□ -0.36
HNRNPC-208ENST00000553753 IRS2Q9Y4H2 1338 aa12.78□□□□□ -0.36
HNRNPC-208ENST00000553753 TBC1D10BQ4KMP7 808 aaPredicted RBP12.78□□□□□ -0.36
HNRNPC-208ENST00000553753 LRRC24Q50LG9 513 aa12.78□□□□□ -0.36
HNRNPC-208ENST00000553753 TTLL5Q6EMB2 1281 aa12.78□□□□□ -0.36
HNRNPC-208ENST00000553753 CLUAP1Q96AJ1 413 aa12.78□□□□□ -0.36
HNRNPC-208ENST00000553753 GMLQ99445 158 aa12.78□□□□□ -0.36
HNRNPC-208ENST00000553753 CD209Q9NNX6 404 aa12.78□□□□□ -0.36
HNRNPC-208ENST00000553753 ZNF609O15014 1411 aa12.78□□□□□ -0.36
HNRNPC-208ENST00000553753 PSME4Q14997 1843 aa12.77□□□□□ -0.36
HNRNPC-208ENST00000553753 EGFRP00533 1210 aa12.77□□□□□ -0.36
HNRNPC-208ENST00000553753 GNAI3P08754 354 aa12.77□□□□□ -0.36
HNRNPC-208ENST00000553753 USP17L8P0C7I0 530 aa12.77□□□□□ -0.36
HNRNPC-208ENST00000553753 UBE4AQ14139 1066 aa12.77□□□□□ -0.36
HNRNPC-208ENST00000553753 DACT2Q5SW24 774 aa12.77□□□□□ -0.36
HNRNPC-208ENST00000553753 RBM26Q5T8P6 1007 aaKnown RBP12.77□□□□□ -0.36
HNRNPC-208ENST00000553753 FBXW7Q969H0 707 aa12.77□□□□□ -0.36
HNRNPC-208ENST00000553753 KLRG1Q96E93 195 aa12.77□□□□□ -0.36
HNRNPC-208ENST00000553753 TNNQ9UQP3 1299 aa12.77□□□□□ -0.36
HNRNPC-208ENST00000553753 LRRFIP2Q9Y608 721 aaKnown RBP12.77□□□□□ -0.36
HNRNPC-208ENST00000553753 A0A1B0GUL6 1792 aa12.77□□□□□ -0.37
HNRNPC-208ENST00000553753 TMEM88BA6NKF7 163 aa12.76□□□□□ -0.37
HNRNPC-208ENST00000553753 RFX5P48382 616 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-208ENST00000553753 ZNF280AP59817 542 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-208ENST00000553753 PTPN12Q05209 780 aaKnown RBP12.76□□□□□ -0.37
HNRNPC-208ENST00000553753 METTL24Q5JXM2 366 aa12.76□□□□□ -0.37
HNRNPC-208ENST00000553753 ZNF804AQ7Z570 1209 aa12.76□□□□□ -0.37
HNRNPC-208ENST00000553753 MYO3BQ8WXR4 1341 aa12.76□□□□□ -0.37
HNRNPC-208ENST00000553753 PDE8BO95263 885 aa12.76□□□□□ -0.37
HNRNPC-208ENST00000553753 IL1R1P14778 569 aa12.76□□□□□ -0.37
HNRNPC-208ENST00000553753 GTF2IP78347 998 aa12.76□□□□□ -0.37
HNRNPC-208ENST00000553753 KIF4BQ2VIQ3 1234 aa12.76□□□□□ -0.37
HNRNPC-208ENST00000553753 CDC37L1Q7L3B6 337 aa12.76□□□□□ -0.37
HNRNPC-208ENST00000553753 MXD3Q9BW11 206 aa12.76□□□□□ -0.37
HNRNPC-208ENST00000553753 EYA2O00167 538 aa12.75□□□□□ -0.37
HNRNPC-208ENST00000553753 TRAF5O00463 557 aa12.75□□□□□ -0.37
HNRNPC-208ENST00000553753 OGFOD1Q8N543 542 aa12.75□□□□□ -0.37
HNRNPC-208ENST00000553753 VGLL2Q8N8G2 317 aa12.75□□□□□ -0.37
HNRNPC-208ENST00000553753 MYOZ2Q9NPC6 264 aa12.75□□□□□ -0.37
HNRNPC-208ENST00000553753 FMR1Q06787 632 aaKnown RBP eCLIP12.74□□□□□ -0.37
HNRNPC-208ENST00000553753 FTSJ3Q8IY81 847 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-208ENST00000553753 TMEM57Q8N5G2 664 aa12.74□□□□□ -0.37
HNRNPC-208ENST00000553753 GLIS2Q9BZE0 524 aaPredicted RBP12.74□□□□□ -0.37
HNRNPC-208ENST00000553753 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
HNRNPC-208ENST00000553753 SASH1O94885 1247 aa12.74□□□□□ -0.37
HNRNPC-208ENST00000553753 HIBADHP31937 336 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-208ENST00000553753 GYG1P46976 350 aa12.74□□□□□ -0.37
HNRNPC-208ENST00000553753 MMP14P50281 582 aa12.74□□□□□ -0.37
HNRNPC-208ENST00000553753 DCPSQ96C86 337 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-208ENST00000553753 FAM84BQ96KN1 310 aaPredicted RBP12.74□□□□□ -0.37
HNRNPC-208ENST00000553753 GNAI2P04899 355 aa12.73□□□□□ -0.37
HNRNPC-208ENST00000553753 CST9Q5W186 159 aa12.73□□□□□ -0.37
HNRNPC-208ENST00000553753 ATG9AQ7Z3C6 839 aa12.73□□□□□ -0.37
HNRNPC-208ENST00000553753 KIAA0825Q8IV33 1275 aa12.73□□□□□ -0.37
HNRNPC-208ENST00000553753 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
HNRNPC-208ENST00000553753 SIL1Q9H173 461 aa12.73□□□□□ -0.37
HNRNPC-208ENST00000553753 MKRN1Q9UHC7 482 aaKnown RBP12.73□□□□□ -0.37
HNRNPC-208ENST00000553753 SRGAP3O43295 1099 aa12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 CIAO1O76071 339 aa12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 MTX1Q13505 466 aa12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 SCARF1Q14162 830 aa12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 PUM3Q15397 648 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 CAVIN4Q5BKX8 364 aa12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 KRT26Q7Z3Y9 468 aa12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 USP48Q86UV5 1035 aa12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 VPS37DQ86XT2 251 aa12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 JMYQ8N9B5 988 aa12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 TDRD7Q8NHU6 1098 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 COPRSQ9NQ92 184 aa12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 ZNF646O15015 1829 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 POLR2AP24928 1970 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-208ENST00000553753 FGFR2P21802 821 aa12.71□□□□□ -0.37
HNRNPC-208ENST00000553753 FBXO33Q7Z6M2 555 aa12.71□□□□□ -0.37
HNRNPC-208ENST00000553753 CERS5Q8N5B7 392 aa12.71□□□□□ -0.37
HNRNPC-208ENST00000553753 GGA3Q9NZ52 723 aa12.71□□□□□ -0.37
HNRNPC-208ENST00000553753 HDAC9Q9UKV0 1011 aa12.71□□□□□ -0.37
HNRNPC-208ENST00000553753 ABT1Q9ULW3 272 aaKnown RBP12.71□□□□□ -0.37
HNRNPC-208ENST00000553753 PA2G4Q9UQ80 394 aaKnown RBP12.71□□□□□ -0.37
HNRNPC-208ENST00000553753 ASTN2O75129 1339 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-208ENST00000553753 CNTNAP1P78357 1384 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms