RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 CHRNDQ07001 517 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 NECTIN1Q15223 517 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 HELLSQ9NRZ9 838 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 TAF1P21675 1872 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 PSMA5P28066 241 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 PLCB2Q00722 1185 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 ADCK5Q3MIX3 580 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 C3orf67Q6ZVT6 689 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 ZGPATQ8N5A5 531 aaKnown RBP9.89□□□□□ -0.83
RAB5B-210ENST00000553116 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
RAB5B-210ENST00000553116 PDRG1Q9NUG6 133 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 C4AP0C0L4 1744 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 RTL9Q8NET4 1388 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 LRP5O75197 1615 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 TTF1Q15361 905 aaPredicted RBP9.89□□□□□ -0.83
RAB5B-210ENST00000553116 SLC27A3Q5K4L6 730 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 HMG20BQ9P0W2 317 aa9.89□□□□□ -0.83
RAB5B-210ENST00000553116 U3KPZ7 1027 aaPredicted RBP9.89□□□□□ -0.83
RAB5B-210ENST00000553116 MYH7P12883 1935 aa9.88□□□□□ -0.83
RAB5B-210ENST00000553116 CASZ1Q86V15 1759 aa9.88□□□□□ -0.83
RAB5B-210ENST00000553116 RGL2O15211 777 aa9.88□□□□□ -0.83
RAB5B-210ENST00000553116 ZFYP08048 801 aaPredicted RBP9.88□□□□□ -0.83
RAB5B-210ENST00000553116 SSFA2P28290 1259 aa9.88□□□□□ -0.83
RAB5B-210ENST00000553116 AK2P54819 239 aa9.88□□□□□ -0.83
RAB5B-210ENST00000553116 BLOC1S2Q6QNY1 142 aa9.88□□□□□ -0.83
RAB5B-210ENST00000553116 VPS37DQ86XT2 251 aa9.88□□□□□ -0.83
RAB5B-210ENST00000553116 CNBD1Q8NA66 436 aa9.88□□□□□ -0.83
RAB5B-210ENST00000553116 SF3B3Q15393 1217 aaKnown RBP9.88□□□□□ -0.83
RAB5B-210ENST00000553116 ZMYM1Q5SVZ6 1142 aa9.88□□□□□ -0.83
RAB5B-210ENST00000553116 ZSCAN25Q6NSZ9 544 aa9.88□□□□□ -0.83
RAB5B-210ENST00000553116 GBP4Q96PP9 640 aa9.88□□□□□ -0.83
RAB5B-210ENST00000553116 CWC22Q9HCG8 908 aaKnown RBP9.88□□□□□ -0.83
RAB5B-210ENST00000553116 MAST3O60307 1309 aa9.88□□□□□ -0.83
RAB5B-210ENST00000553116 CARMIL3Q8ND23 1372 aa9.87□□□□□ -0.83
RAB5B-210ENST00000553116 FGD1P98174 961 aa9.87□□□□□ -0.83
RAB5B-210ENST00000553116 NUCB2P80303 420 aa9.87□□□□□ -0.83
RAB5B-210ENST00000553116 CELF1Q92879 486 aaKnown RBP9.87□□□□□ -0.83
RAB5B-210ENST00000553116 TNPO1Q92973 898 aaKnown RBP9.87□□□□□ -0.83
RAB5B-210ENST00000553116 M0R2C6 588 aa9.87□□□□□ -0.83
RAB5B-210ENST00000553116 KRT32Q14532 448 aa9.87□□□□□ -0.83
RAB5B-210ENST00000553116 NFIXQ14938 502 aa9.87□□□□□ -0.83
RAB5B-210ENST00000553116 SLC9C2Q5TAH2 1124 aa9.87□□□□□ -0.83
RAB5B-210ENST00000553116 VPS53Q5VIR6 699 aa9.87□□□□□ -0.83
RAB5B-210ENST00000553116 RUFY3Q7L099 469 aa9.87□□□□□ -0.83
RAB5B-210ENST00000553116 TCEANC2Q96MN5 208 aa9.87□□□□□ -0.83
RAB5B-210ENST00000553116 IQSEC3Q9UPP2 1182 aaPredicted RBP9.87□□□□□ -0.83
RAB5B-210ENST00000553116 LIMCH1Q9UPQ0 1083 aa9.87□□□□□ -0.83
RAB5B-210ENST00000553116 A0A0U1RQG5 324 aaPredicted RBP9.86□□□□□ -0.83
RAB5B-210ENST00000553116 APBA3O96018 575 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 FGFR2P21802 821 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 RXRBP28702 533 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 BCAMP50895 628 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 RAB3GAP1Q15042 981 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 TXNRD1Q16881 649 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 SPATA5Q8NB90 893 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 APPBP2Q92624 585 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 IL17RAQ96F46 866 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 TM6SF1Q9BZW5 370 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 BSDC1Q9NW68 430 aaPredicted RBP9.86□□□□□ -0.83
RAB5B-210ENST00000553116 AKAP11Q9UKA4 1901 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 COL24A1Q17RW2 1714 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 CYP2E1P05181 493 aaPredicted RBP9.86□□□□□ -0.83
RAB5B-210ENST00000553116 ARID4AP29374 1257 aaPredicted RBP9.86□□□□□ -0.83
RAB5B-210ENST00000553116 DDIT3P35638 169 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 RPS8P62241 208 aaKnown RBP9.86□□□□□ -0.83
RAB5B-210ENST00000553116 SLC10A5Q5PT55 438 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 OSBP2Q969R2 916 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 ZSWIM6Q9HCJ5 1215 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 TFCP2L1Q9NZI6 479 aa9.86□□□□□ -0.83
RAB5B-210ENST00000553116 MYO5AQ9Y4I1 1855 aaKnown RBP9.86□□□□□ -0.83
RAB5B-210ENST00000553116 HSPD1P10809 573 aaKnown RBP9.85□□□□□ -0.83
RAB5B-210ENST00000553116 RASGRF1Q13972 1273 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 FOXD4L5Q5VV16 416 aaPredicted RBP9.85□□□□□ -0.83
RAB5B-210ENST00000553116 TICAM2Q86XR7 235 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 FOXD4L4Q8WXT5 416 aaPredicted RBP9.85□□□□□ -0.83
RAB5B-210ENST00000553116 GNL3LQ9NVN8 582 aaKnown RBP9.85□□□□□ -0.83
RAB5B-210ENST00000553116 ARAP2Q8WZ64 1704 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 UBR3Q6ZT12 1888 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 ZBTB22O15209 634 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 APPP05067 770 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 MCM4P33991 863 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 ST5P78524 1137 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 MAP3K12Q12852 859 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 CAVIN4Q5BKX8 364 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 ZNF512BQ96KM6 892 aaPredicted RBP9.85□□□□□ -0.83
RAB5B-210ENST00000553116 TTC14Q96N46 770 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 DSCC1Q9BVC3 393 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 PIH1D3Q9NQM4 214 aaKnown RBP9.85□□□□□ -0.83
RAB5B-210ENST00000553116 DDX11L8A8MPP1 907 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 GOLGA6L22H0YM25 854 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 CYP21A2P08686 494 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 HMGB2P26583 209 aaKnown RBP9.85□□□□□ -0.83
RAB5B-210ENST00000553116 RPGRQ92834 1020 aaKnown RBP9.85□□□□□ -0.83
RAB5B-210ENST00000553116 KCNB2Q92953 911 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 NEK1Q96PY6 1258 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 TAF6LQ9Y6J9 622 aa9.85□□□□□ -0.83
RAB5B-210ENST00000553116 GPAA1O43292 621 aa9.84□□□□□ -0.83
RAB5B-210ENST00000553116 GYG1P46976 350 aa9.84□□□□□ -0.83
RAB5B-210ENST00000553116 PUS7LQ9H0K6 701 aaKnown RBP9.84□□□□□ -0.83
RAB5B-210ENST00000553116 LRP2BPQ9P2M1 347 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms