RNA–Protein interactions for RNA: ENST00000552810.5

CEP290-207, Transcript of centrosomal protein 290, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEP290, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-207ENST00000552810 SNX1Q13596 522 aa8.79□□□□□ -1
CEP290-207ENST00000552810 SMAP1Q8IYB5 467 aaPredicted RBP8.79□□□□□ -1
CEP290-207ENST00000552810 ATP6V0A1Q93050 837 aa8.79□□□□□ -1
CEP290-207ENST00000552810 C7orf25Q9BPX7 421 aa8.79□□□□□ -1
CEP290-207ENST00000552810 IQSEC3Q9UPP2 1182 aaPredicted RBP8.79□□□□□ -1
CEP290-207ENST00000552810 F6X3S4 739 aa8.79□□□□□ -1
CEP290-207ENST00000552810 MARCKSP29966 332 aaPredicted RBP8.79□□□□□ -1
CEP290-207ENST00000552810 NBPF8Q3BBV2 869 aa8.79□□□□□ -1
CEP290-207ENST00000552810 IFT74Q96LB3 600 aa8.79□□□□□ -1
CEP290-207ENST00000552810 CCDC68Q9H2F9 335 aa8.79□□□□□ -1
CEP290-207ENST00000552810 GOLGA6BA6NDN3 693 aa8.79□□□□□ -1
CEP290-207ENST00000552810 ATP2A1O14983 1001 aa8.79□□□□□ -1
CEP290-207ENST00000552810 AFAP1Q8N556 730 aa8.79□□□□□ -1
CEP290-207ENST00000552810 MRFAP1L1Q96HT8 127 aa8.79□□□□□ -1
CEP290-207ENST00000552810 STMN4Q9H169 189 aaPredicted RBP8.79□□□□□ -1
CEP290-207ENST00000552810 SYNCQ9H7C4 482 aa8.79□□□□□ -1
CEP290-207ENST00000552810 DACH1Q9UI36 760 aa8.79□□□□□ -1
CEP290-207ENST00000552810 MAGED2Q9UNF1 606 aaPredicted RBP8.79□□□□□ -1
CEP290-207ENST00000552810 JAG2Q9Y219 1238 aa8.79□□□□□ -1
CEP290-207ENST00000552810 SETD5Q9C0A6 1442 aa8.79□□□□□ -1
CEP290-207ENST00000552810 CNNM3Q8NE01 707 aa8.79□□□□□ -1
CEP290-207ENST00000552810 ABT1Q9ULW3 272 aaKnown RBP8.79□□□□□ -1
CEP290-207ENST00000552810 KIF1CO43896 1103 aaKnown RBP8.78□□□□□ -1
CEP290-207ENST00000552810 CCDC77Q9BR77 488 aa8.78□□□□□ -1
CEP290-207ENST00000552810 GUCA1BQ9UMX6 200 aa8.78□□□□□ -1
CEP290-207ENST00000552810 ANKRD65E5RJM6 399 aa8.78□□□□□ -1
CEP290-207ENST00000552810 STK25O00506 426 aa8.78□□□□□ -1
CEP290-207ENST00000552810 NBNO60934 754 aa8.78□□□□□ -1
CEP290-207ENST00000552810 RXRAP19793 462 aa8.78□□□□□ -1
CEP290-207ENST00000552810 GJB2P29033 226 aa8.78□□□□□ -1
CEP290-207ENST00000552810 DCLK2Q8N568 766 aa8.78□□□□□ -1
CEP290-207ENST00000552810 SPDL1Q96EA4 605 aa8.78□□□□□ -1
CEP290-207ENST00000552810 SLC24A3Q9HC58 644 aa8.78□□□□□ -1
CEP290-207ENST00000552810 WDR33Q9C0J8 1336 aaKnown RBP8.78□□□□□ -1
CEP290-207ENST00000552810 KIF15Q9NS87 1388 aa8.78□□□□□ -1
CEP290-207ENST00000552810 BLOC1S2Q6QNY1 142 aa8.78□□□□□ -1
CEP290-207ENST00000552810 VPS52Q8N1B4 723 aa8.78□□□□□ -1
CEP290-207ENST00000552810 SCHIP1Q9P0W5 487 aaPredicted RBP8.78□□□□□ -1
CEP290-207ENST00000552810 TMEM232C9JQI7 657 aa8.78□□□□□ -1
CEP290-207ENST00000552810 HIP1RO75146 1068 aa8.78□□□□□ -1
CEP290-207ENST00000552810 NBPF7P0C2Y1 421 aaPredicted RBP8.78□□□□□ -1
CEP290-207ENST00000552810 KHDRBS2Q5VWX1 349 aaKnown RBP8.78□□□□□ -1
CEP290-207ENST00000552810 PNMA8AQ86V59 439 aaPredicted RBP8.78□□□□□ -1
CEP290-207ENST00000552810 TRIM6Q9C030 488 aaPredicted RBP8.78□□□□□ -1
CEP290-207ENST00000552810 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.78□□□□□ -1
CEP290-207ENST00000552810 ATP8A1Q9Y2Q0 1164 aa8.78□□□□□ -1
CEP290-207ENST00000552810 IQANK1A0A1B0GTG1 560 aa8.78□□□□□ -1
CEP290-207ENST00000552810 PRKAR2BP31323 418 aa8.78□□□□□ -1
CEP290-207ENST00000552810 PAFAH1B1P43034 410 aa8.78□□□□□ -1
CEP290-207ENST00000552810 PLCB3Q01970 1234 aa8.78□□□□□ -1
CEP290-207ENST00000552810 ZSCAN23Q3MJ62 389 aa8.78□□□□□ -1
CEP290-207ENST00000552810 NBPF10Q6P3W6 841 aaKnown RBP8.78□□□□□ -1
CEP290-207ENST00000552810 ARHGEF2Q92974 986 aaKnown RBP8.78□□□□□ -1
CEP290-207ENST00000552810 L3MBTL3Q96JM7 780 aaPredicted RBP8.78□□□□□ -1
CEP290-207ENST00000552810 BACH2Q9BYV9 841 aa8.78□□□□□ -1
CEP290-207ENST00000552810 SAMM50Q9Y512 469 aa8.78□□□□□ -1
CEP290-207ENST00000552810 RAB11FIP3O75154 756 aa8.77□□□□□ -1
CEP290-207ENST00000552810 ZPR1O75312 459 aa8.77□□□□□ -1
CEP290-207ENST00000552810 HSPA1LP34931 641 aa8.77□□□□□ -1
CEP290-207ENST00000552810 ST13P50502 369 aaKnown RBP8.77□□□□□ -1
CEP290-207ENST00000552810 AOPEPQ8N6M6 819 aa8.77□□□□□ -1
CEP290-207ENST00000552810 TXNDC16Q9P2K2 825 aa8.77□□□□□ -1
CEP290-207ENST00000552810 TWISTNBQ3B726 338 aaPredicted RBP8.77□□□□□ -1.01
CEP290-207ENST00000552810 JAKMIP2Q96AA8 810 aa8.77□□□□□ -1.01
CEP290-207ENST00000552810 HVCN1Q96D96 273 aa8.77□□□□□ -1.01
CEP290-207ENST00000552810 ZBBXA8MT70 800 aa8.77□□□□□ -1.01
CEP290-207ENST00000552810 ANO6Q4KMQ2 910 aa8.77□□□□□ -1.01
CEP290-207ENST00000552810 DDX21Q9NR30 783 aaKnown RBP eCLIP8.77□□□□□ -1.01
CEP290-207ENST00000552810 PAIP2BQ9ULR5 123 aaKnown RBP8.77□□□□□ -1.01
CEP290-207ENST00000552810 ZKSCAN5Q9Y2L8 839 aa8.77□□□□□ -1.01
CEP290-207ENST00000552810 F8W031 263 aaPredicted RBP8.77□□□□□ -1.01
CEP290-207ENST00000552810 CARSP49589 748 aaKnown RBP8.77□□□□□ -1.01
CEP290-207ENST00000552810 C16orf72Q14CZ0 275 aa8.77□□□□□ -1.01
CEP290-207ENST00000552810 MTERF2Q49AM1 385 aa8.77□□□□□ -1.01
CEP290-207ENST00000552810 ASZ1Q8WWH4 475 aa8.77□□□□□ -1.01
CEP290-207ENST00000552810 GIPC1O14908 333 aa8.77□□□□□ -1.01
CEP290-207ENST00000552810 C6orf203Q9P0P8 240 aaPredicted RBP8.77□□□□□ -1.01
CEP290-207ENST00000552810 DAAM1Q9Y4D1 1078 aa8.77□□□□□ -1.01
CEP290-207ENST00000552810 JMYQ8N9B5 988 aa8.77□□□□□ -1.01
CEP290-207ENST00000552810 TEKT1Q969V4 418 aa8.77□□□□□ -1.01
CEP290-207ENST00000552810 GTPBP10A4D1E9 387 aaKnown RBP8.76□□□□□ -1.01
CEP290-207ENST00000552810 GFAPP14136 432 aa8.76□□□□□ -1.01
CEP290-207ENST00000552810 KIF5BP33176 963 aa8.76□□□□□ -1.01
CEP290-207ENST00000552810 MVPQ14764 893 aaKnown RBP8.76□□□□□ -1.01
CEP290-207ENST00000552810 RRAGBQ5VZM2 374 aa8.76□□□□□ -1.01
CEP290-207ENST00000552810 ZNF280CQ8ND82 737 aa8.76□□□□□ -1.01
CEP290-207ENST00000552810 HNRNPCP07910 306 aaKnown RBP eCLIP8.76□□□□□ -1.01
CEP290-207ENST00000552810 RRS1Q15050 365 aaKnown RBP8.76□□□□□ -1.01
CEP290-207ENST00000552810 ZNF569Q5MCW4 686 aa8.76□□□□□ -1.01
CEP290-207ENST00000552810 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.76□□□□□ -1.01
CEP290-207ENST00000552810 SPDYE2BA6NHP3 402 aa8.76□□□□□ -1.01
CEP290-207ENST00000552810 LMNAP02545 664 aaKnown RBP8.76□□□□□ -1.01
CEP290-207ENST00000552810 SPDYE6P0CI01 402 aa8.76□□□□□ -1.01
CEP290-207ENST00000552810 HARSP12081 509 aaKnown RBP8.76□□□□□ -1.01
CEP290-207ENST00000552810 SEMA3FQ13275 785 aa8.76□□□□□ -1.01
CEP290-207ENST00000552810 CACNA2D3Q8IZS8 1091 aa8.76□□□□□ -1.01
CEP290-207ENST00000552810 NEK11Q8NG66 645 aa8.76□□□□□ -1.01
CEP290-207ENST00000552810 GBP5Q96PP8 586 aa8.76□□□□□ -1.01
CEP290-207ENST00000552810 PPANQ9NQ55 473 aaKnown RBP8.76□□□□□ -1.01
CEP290-207ENST00000552810 ABCF3Q9NUQ8 709 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms