RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 HSPA4P34932 840 aa15.31■□□□□ 0.04
CACNB3-223ENST00000552480 MCAMP43121 646 aa15.31■□□□□ 0.04
CACNB3-223ENST00000552480 ZAP70P43403 619 aa15.31■□□□□ 0.04
CACNB3-223ENST00000552480 PHKA1P46020 1223 aa15.31■□□□□ 0.04
CACNB3-223ENST00000552480 FKBP4Q02790 459 aaKnown RBP eCLIP15.31■□□□□ 0.04
CACNB3-223ENST00000552480 SLC15A2Q16348 729 aa15.31■□□□□ 0.04
CACNB3-223ENST00000552480 RPGRQ92834 1020 aaKnown RBP15.31■□□□□ 0.04
CACNB3-223ENST00000552480 ANO8Q9HCE9 1232 aaPredicted RBP15.31■□□□□ 0.04
CACNB3-223ENST00000552480 CCDC171Q6TFL3 1326 aa15.31■□□□□ 0.04
CACNB3-223ENST00000552480 KLRG2A4D1S0 409 aaPredicted RBP15.3■□□□□ 0.04
CACNB3-223ENST00000552480 RNF113AO15541 343 aaKnown RBP15.3■□□□□ 0.04
CACNB3-223ENST00000552480 TTF1Q15361 905 aaPredicted RBP15.3■□□□□ 0.04
CACNB3-223ENST00000552480 HSCBQ8IWL3 235 aa15.3■□□□□ 0.04
CACNB3-223ENST00000552480 RBM17Q96I25 401 aaKnown RBP15.3■□□□□ 0.04
CACNB3-223ENST00000552480 ANTXR1Q9H6X2 564 aa15.3■□□□□ 0.04
CACNB3-223ENST00000552480 HELLSQ9NRZ9 838 aa15.3■□□□□ 0.04
CACNB3-223ENST00000552480 ANKRD31Q8N7Z5 1873 aa15.29■□□□□ 0.04
CACNB3-223ENST00000552480 SNAP23O00161 211 aa15.29■□□□□ 0.04
CACNB3-223ENST00000552480 ZFYP08048 801 aaPredicted RBP15.29■□□□□ 0.04
CACNB3-223ENST00000552480 SLC4A3P48751 1232 aa15.29■□□□□ 0.04
CACNB3-223ENST00000552480 MCMDC2Q4G0Z9 681 aa15.29■□□□□ 0.04
CACNB3-223ENST00000552480 ZMYM1Q5SVZ6 1142 aa15.29■□□□□ 0.04
CACNB3-223ENST00000552480 PARP3Q9Y6F1 533 aa15.29■□□□□ 0.04
CACNB3-223ENST00000552480 ZNF804BA4D1E1 1349 aa15.28■□□□□ 0.04
CACNB3-223ENST00000552480 HOXA10P31260 410 aaPredicted RBP15.28■□□□□ 0.04
CACNB3-223ENST00000552480 PTH1RQ03431 593 aa15.28■□□□□ 0.04
CACNB3-223ENST00000552480 PI16Q6UXB8 463 aa15.28■□□□□ 0.04
CACNB3-223ENST00000552480 ERICH6Q7L0X2 663 aa15.28■□□□□ 0.04
CACNB3-223ENST00000552480 HMG20BQ9P0W2 317 aa15.28■□□□□ 0.04
CACNB3-223ENST00000552480 PALD1Q9ULE6 856 aa15.28■□□□□ 0.04
CACNB3-223ENST00000552480 EP400Q96L91 3159 aa15.28■□□□□ 0.04
CACNB3-223ENST00000552480 MYH7P12883 1935 aa15.27■□□□□ 0.04
CACNB3-223ENST00000552480 DOCK2Q92608 1830 aa15.27■□□□□ 0.04
CACNB3-223ENST00000552480 CYP2E1P05181 493 aaPredicted RBP15.27■□□□□ 0.04
CACNB3-223ENST00000552480 MMP10P09238 476 aa15.27■□□□□ 0.04
CACNB3-223ENST00000552480 BCAMP50895 628 aa15.27■□□□□ 0.04
CACNB3-223ENST00000552480 ZSCAN25Q6NSZ9 544 aa15.27■□□□□ 0.04
CACNB3-223ENST00000552480 ZNF589Q86UQ0 364 aaPredicted RBP15.27■□□□□ 0.04
CACNB3-223ENST00000552480 SPATA5Q8NB90 893 aa15.27■□□□□ 0.04
CACNB3-223ENST00000552480 IL27Q8NEV9 243 aa15.27■□□□□ 0.04
CACNB3-223ENST00000552480 MAP4K1Q92918 833 aa15.27■□□□□ 0.04
CACNB3-223ENST00000552480 KCNB2Q92953 911 aa15.27■□□□□ 0.04
CACNB3-223ENST00000552480 CRAMP1Q96RY5 1269 aa15.27■□□□□ 0.04
CACNB3-223ENST00000552480 BRIP1Q9BX63 1249 aa15.27■□□□□ 0.04
CACNB3-223ENST00000552480 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.27■□□□□ 0.04
CACNB3-223ENST00000552480 GNL3LQ9NVN8 582 aaKnown RBP15.27■□□□□ 0.04
CACNB3-223ENST00000552480 LRRC37AA6NMS7 1700 aa15.26■□□□□ 0.03
CACNB3-223ENST00000552480 KCNJ4P48050 445 aa15.26■□□□□ 0.03
CACNB3-223ENST00000552480 RASGRF1Q13972 1273 aa15.26■□□□□ 0.03
CACNB3-223ENST00000552480 CAVIN4Q5BKX8 364 aa15.26■□□□□ 0.03
CACNB3-223ENST00000552480 MAST3O60307 1309 aa15.25■□□□□ 0.03
CACNB3-223ENST00000552480 ST18O60284 1047 aa15.25■□□□□ 0.03
CACNB3-223ENST00000552480 BBOX1O75936 387 aa15.25■□□□□ 0.03
CACNB3-223ENST00000552480 CHGBP05060 677 aa15.25■□□□□ 0.03
CACNB3-223ENST00000552480 MSL1Q68DK7 614 aa15.25■□□□□ 0.03
CACNB3-223ENST00000552480 TMC4Q7Z404 712 aa15.25■□□□□ 0.03
CACNB3-223ENST00000552480 SEC62Q99442 399 aaKnown RBP15.25■□□□□ 0.03
CACNB3-223ENST00000552480 PIH1D3Q9NQM4 214 aaKnown RBP15.25■□□□□ 0.03
CACNB3-223ENST00000552480 LEMD3Q9Y2U8 911 aa15.25■□□□□ 0.03
CACNB3-223ENST00000552480 RBM8AQ9Y5S9 174 aaKnown RBP15.25■□□□□ 0.03
CACNB3-223ENST00000552480 SNX14Q9Y5W7 946 aa15.25■□□□□ 0.03
CACNB3-223ENST00000552480 XDHP47989 1333 aa15.24■□□□□ 0.03
CACNB3-223ENST00000552480 COL11A2P13942 1736 aaPredicted RBP15.24■□□□□ 0.03
CACNB3-223ENST00000552480 ZBTB22O15209 634 aa15.24■□□□□ 0.03
CACNB3-223ENST00000552480 CD2BP2O95400 341 aaKnown RBP15.24■□□□□ 0.03
CACNB3-223ENST00000552480 ADD2P35612 726 aa15.24■□□□□ 0.03
CACNB3-223ENST00000552480 PDE6BP35913 854 aa15.24■□□□□ 0.03
CACNB3-223ENST00000552480 GYG1P46976 350 aa15.24■□□□□ 0.03
CACNB3-223ENST00000552480 NECTIN1Q15223 517 aa15.24■□□□□ 0.03
CACNB3-223ENST00000552480 CCDC129Q6ZRS4 1044 aa15.24■□□□□ 0.03
CACNB3-223ENST00000552480 FBXO33Q7Z6M2 555 aa15.24■□□□□ 0.03
CACNB3-223ENST00000552480 DEFB132Q7Z7B7 95 aa15.24■□□□□ 0.03
CACNB3-223ENST00000552480 CCDC125Q86Z20 511 aa15.24■□□□□ 0.03
CACNB3-223ENST00000552480 APPBP2Q92624 585 aa15.24■□□□□ 0.03
CACNB3-223ENST00000552480 FAM84BQ96KN1 310 aaPredicted RBP15.24■□□□□ 0.03
CACNB3-223ENST00000552480 PDS5AQ29RF7 1337 aaKnown RBP15.23■□□□□ 0.03
CACNB3-223ENST00000552480 IRS2Q9Y4H2 1338 aa15.23■□□□□ 0.03
CACNB3-223ENST00000552480 K7ELQ4 463 aaPredicted RBP15.23■□□□□ 0.03
CACNB3-223ENST00000552480 M0R2C6 588 aa15.23■□□□□ 0.03
CACNB3-223ENST00000552480 SEMA3EO15041 775 aa15.23■□□□□ 0.03
CACNB3-223ENST00000552480 NPR1P16066 1061 aa15.23■□□□□ 0.03
CACNB3-223ENST00000552480 PRPF40BQ6NWY9 871 aaKnown RBP15.23■□□□□ 0.03
CACNB3-223ENST00000552480 VPS37DQ86XT2 251 aa15.23■□□□□ 0.03
CACNB3-223ENST00000552480 OSBP2Q969R2 916 aa15.23■□□□□ 0.03
CACNB3-223ENST00000552480 DSCC1Q9BVC3 393 aa15.23■□□□□ 0.03
CACNB3-223ENST00000552480 DENND2AQ9ULE3 1009 aa15.23■□□□□ 0.03
CACNB3-223ENST00000552480 U3KPZ7 1027 aaPredicted RBP15.23■□□□□ 0.03
CACNB3-223ENST00000552480 COL1A1P02452 1464 aaPredicted RBP15.22■□□□□ 0.03
CACNB3-223ENST00000552480 WTIPA6NIX2 430 aaPredicted RBP15.22■□□□□ 0.03
CACNB3-223ENST00000552480 SLC27A2O14975 620 aa15.22■□□□□ 0.03
CACNB3-223ENST00000552480 IDH1O75874 414 aaKnown RBP15.22■□□□□ 0.03
CACNB3-223ENST00000552480 ZKSCAN1P17029 563 aaPredicted RBP15.22■□□□□ 0.03
CACNB3-223ENST00000552480 UBE3CQ15386 1083 aa15.22■□□□□ 0.03
CACNB3-223ENST00000552480 WASHC4Q2M389 1173 aa15.22■□□□□ 0.03
CACNB3-223ENST00000552480 SLFNL1Q499Z3 407 aa15.22■□□□□ 0.03
CACNB3-223ENST00000552480 RNF20Q5VTR2 975 aa15.22■□□□□ 0.03
CACNB3-223ENST00000552480 CREB3L3Q68CJ9 461 aa15.22■□□□□ 0.03
CACNB3-223ENST00000552480 C15orf52Q6ZUT6 534 aaKnown RBP15.22■□□□□ 0.03
CACNB3-223ENST00000552480 RASEFQ8IZ41 740 aa15.22■□□□□ 0.03
CACNB3-223ENST00000552480 ANKIB1Q9P2G1 1089 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms