RNA–Protein interactions for RNA: ENST00000552346.1

USP15-218, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-218ENST00000552346 CEP41Q9BYV8 373 aa9.17□□□□□ -0.94
USP15-218ENST00000552346 KCNK4Q9NYG8 393 aa9.17□□□□□ -0.94
USP15-218ENST00000552346 ZBTB39O15060 712 aa9.16□□□□□ -0.94
USP15-218ENST00000552346 ATG7O95352 703 aa9.16□□□□□ -0.94
USP15-218ENST00000552346 CYP2E1P05181 493 aaPredicted RBP9.16□□□□□ -0.94
USP15-218ENST00000552346 CD97P48960 835 aa9.16□□□□□ -0.94
USP15-218ENST00000552346 SRPK2P78362 688 aaKnown RBP9.16□□□□□ -0.94
USP15-218ENST00000552346 ADAMTSL4Q6UY14 1074 aa9.16□□□□□ -0.94
USP15-218ENST00000552346 PBX4Q9BYU1 374 aa9.16□□□□□ -0.94
USP15-218ENST00000552346 FSCN2O14926 492 aa9.15□□□□□ -0.94
USP15-218ENST00000552346 NCAPG2Q86XI2 1143 aa9.15□□□□□ -0.94
USP15-218ENST00000552346 ARMC10Q8N2F6 343 aa9.15□□□□□ -0.94
USP15-218ENST00000552346 KLHL23Q8NBE8 558 aa9.15□□□□□ -0.94
USP15-218ENST00000552346 CLP1Q92989 425 aaKnown RBP9.15□□□□□ -0.94
USP15-218ENST00000552346 FAM177BA6PVY3 158 aa9.14□□□□□ -0.95
USP15-218ENST00000552346 TM4SF5O14894 197 aa9.14□□□□□ -0.95
USP15-218ENST00000552346 EPHA1P21709 976 aa9.14□□□□□ -0.95
USP15-218ENST00000552346 DUOXA2Q1HG44 320 aa9.14□□□□□ -0.95
USP15-218ENST00000552346 MCTP1Q6DN14 999 aa9.14□□□□□ -0.95
USP15-218ENST00000552346 CEP120Q8N960 986 aa9.14□□□□□ -0.95
USP15-218ENST00000552346 SH2B1Q9NRF2 756 aaPredicted RBP9.14□□□□□ -0.95
USP15-218ENST00000552346 TGFB1P01137 390 aa9.13□□□□□ -0.95
USP15-218ENST00000552346 PTPRAP18433 802 aa9.13□□□□□ -0.95
USP15-218ENST00000552346 UVSSAQ2YD98 709 aa9.13□□□□□ -0.95
USP15-218ENST00000552346 LCE3BQ5TA77 95 aa9.13□□□□□ -0.95
USP15-218ENST00000552346 KIAA1211Q6ZU35 1233 aa9.13□□□□□ -0.95
USP15-218ENST00000552346 UTP4Q969X6 686 aaKnown RBP9.13□□□□□ -0.95
USP15-218ENST00000552346 ELP3Q9H9T3 547 aa9.13□□□□□ -0.95
USP15-218ENST00000552346 COBLO75128 1261 aa9.12□□□□□ -0.95
USP15-218ENST00000552346 PDE12Q6L8Q7 609 aaKnown RBP9.12□□□□□ -0.95
USP15-218ENST00000552346 NUDT16Q96DE0 195 aaKnown RBP9.12□□□□□ -0.95
USP15-218ENST00000552346 TMEM63CQ9P1W3 806 aa9.12□□□□□ -0.95
USP15-218ENST00000552346 USTQ9Y2C2 406 aa9.12□□□□□ -0.95
USP15-218ENST00000552346 PATL2C9JE40 543 aaKnown RBP9.11□□□□□ -0.95
USP15-218ENST00000552346 DDX3YO15523 660 aaKnown RBP9.11□□□□□ -0.95
USP15-218ENST00000552346 MED26O95402 600 aa9.11□□□□□ -0.95
USP15-218ENST00000552346 ZNF438Q7Z4V0 828 aa9.11□□□□□ -0.95
USP15-218ENST00000552346 FOXD4L4Q8WXT5 416 aaPredicted RBP9.11□□□□□ -0.95
USP15-218ENST00000552346 FAM46AQ96IP4 442 aaKnown RBP9.11□□□□□ -0.95
USP15-218ENST00000552346 POP1Q99575 1024 aaKnown RBP9.11□□□□□ -0.95
USP15-218ENST00000552346 ADAM19Q9H013 955 aa9.11□□□□□ -0.95
USP15-218ENST00000552346 C7orf69Q9H7B7 122 aa9.11□□□□□ -0.95
USP15-218ENST00000552346 SEC31BQ9NQW1 1179 aa9.11□□□□□ -0.95
USP15-218ENST00000552346 KANSL3Q9P2N6 904 aa9.11□□□□□ -0.95
USP15-218ENST00000552346 ADAM11O75078 769 aa9.1□□□□□ -0.95
USP15-218ENST00000552346 NFIAQ12857 509 aa9.1□□□□□ -0.95
USP15-218ENST00000552346 ZDHHC13Q8IUH4 622 aa9.1□□□□□ -0.95
USP15-218ENST00000552346 TRIM42Q8IWZ5 723 aa9.1□□□□□ -0.95
USP15-218ENST00000552346 UBASH3BQ8TF42 649 aa9.1□□□□□ -0.95
USP15-218ENST00000552346 KLHDC7BQ96G42 594 aa9.1□□□□□ -0.95
USP15-218ENST00000552346 KIAA1324LA8MWY0 1029 aaPredicted RBP9.09□□□□□ -0.95
USP15-218ENST00000552346 ATCAYQ86WG3 371 aa9.09□□□□□ -0.95
USP15-218ENST00000552346 MYRFLQ96LU7 910 aa9.09□□□□□ -0.95
USP15-218ENST00000552346 CNTN3Q9P232 1028 aa9.09□□□□□ -0.95
USP15-218ENST00000552346 SLAIN2Q9P270 581 aa9.09□□□□□ -0.95
USP15-218ENST00000552346 SEPT3Q9UH03 358 aa9.09□□□□□ -0.95
USP15-218ENST00000552346 COL17A1Q9UMD9 1497 aaPredicted RBP9.08□□□□□ -0.96
USP15-218ENST00000552346 HMX2A2RU54 273 aa9.08□□□□□ -0.96
USP15-218ENST00000552346 H3BRJ5 948 aa9.08□□□□□ -0.96
USP15-218ENST00000552346 BRD1O95696 1058 aa9.08□□□□□ -0.96
USP15-218ENST00000552346 ATP2B4P23634 1241 aa9.08□□□□□ -0.96
USP15-218ENST00000552346 CABP4P57796 275 aa9.08□□□□□ -0.96
USP15-218ENST00000552346 RNF43Q68DV7 783 aa9.08□□□□□ -0.96
USP15-218ENST00000552346 SART1O43290 800 aaKnown RBP9.07□□□□□ -0.96
USP15-218ENST00000552346 RPLP1P05386 114 aaKnown RBP9.07□□□□□ -0.96
USP15-218ENST00000552346 PIP4K2BP78356 416 aa9.07□□□□□ -0.96
USP15-218ENST00000552346 WNT8BQ93098 351 aa9.07□□□□□ -0.96
USP15-218ENST00000552346 GZF1Q9H116 711 aaPredicted RBP9.07□□□□□ -0.96
USP15-218ENST00000552346 SALL4Q9UJQ4 1053 aa9.07□□□□□ -0.96
USP15-218ENST00000552346 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.07□□□□□ -0.96
USP15-218ENST00000552346 ACPPP15309 386 aa9.06□□□□□ -0.96
USP15-218ENST00000552346 CES1P23141 567 aa9.06□□□□□ -0.96
USP15-218ENST00000552346 GRIK1P39086 918 aa9.06□□□□□ -0.96
USP15-218ENST00000552346 IRAK1P51617 712 aa9.06□□□□□ -0.96
USP15-218ENST00000552346 KCNA1Q09470 495 aa9.06□□□□□ -0.96
USP15-218ENST00000552346 FAM20CQ8IXL6 584 aa9.06□□□□□ -0.96
USP15-218ENST00000552346 C1orf127Q8N9H9 656 aa9.06□□□□□ -0.96
USP15-218ENST00000552346 EDEM1Q92611 657 aa9.06□□□□□ -0.96
USP15-218ENST00000552346 DBNDD2Q9BQY9 259 aa9.06□□□□□ -0.96
USP15-218ENST00000552346 GOLGA2P5Q9HBQ8 144 aa9.06□□□□□ -0.96
USP15-218ENST00000552346 OSGEPQ9NPF4 335 aa9.06□□□□□ -0.96
USP15-218ENST00000552346 PAX4O43316 350 aa9.05□□□□□ -0.96
USP15-218ENST00000552346 PCSK2P16519 638 aa9.05□□□□□ -0.96
USP15-218ENST00000552346 GP2P55259 537 aaKnown RBP9.05□□□□□ -0.96
USP15-218ENST00000552346 TMCO4Q5TGY1 634 aa9.05□□□□□ -0.96
USP15-218ENST00000552346 ANKRD34AQ69YU3 496 aa9.05□□□□□ -0.96
USP15-218ENST00000552346 INTS5Q6P9B9 1019 aaKnown RBP9.05□□□□□ -0.96
USP15-218ENST00000552346 XKR5Q6UX68 686 aa9.05□□□□□ -0.96
USP15-218ENST00000552346 CLEC10AQ8IUN9 316 aa9.05□□□□□ -0.96
USP15-218ENST00000552346 OAS3Q9Y6K5 1087 aaKnown RBP9.05□□□□□ -0.96
USP15-218ENST00000552346 NFKBIEO00221 500 aa9.04□□□□□ -0.96
USP15-218ENST00000552346 BMP3P12645 472 aa9.04□□□□□ -0.96
USP15-218ENST00000552346 NLRP12P59046 1061 aa9.04□□□□□ -0.96
USP15-218ENST00000552346 DNM1Q05193 864 aaKnown RBP9.04□□□□□ -0.96
USP15-218ENST00000552346 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.04□□□□□ -0.96
USP15-218ENST00000552346 KRTAP19-1Q8IUB9 90 aa9.04□□□□□ -0.96
USP15-218ENST00000552346 SLC7A3Q8WY07 619 aa9.04□□□□□ -0.96
USP15-218ENST00000552346 FAM83CQ9BQN1 747 aa9.04□□□□□ -0.96
USP15-218ENST00000552346 RNF208Q9H0X6 261 aa9.04□□□□□ -0.96
USP15-218ENST00000552346 KCNF1Q9H3M0 494 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms