RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 KRT24Q2M2I5 525 aa16.64■□□□□ 0.25
CACNB3-221ENST00000552022 ERO1AQ96HE7 468 aa16.64■□□□□ 0.25
CACNB3-221ENST00000552022 CHPF2Q9P2E5 772 aa16.64■□□□□ 0.25
CACNB3-221ENST00000552022 H0YGN5 161 aa16.63■□□□□ 0.25
CACNB3-221ENST00000552022 SASH1O94885 1247 aa16.63■□□□□ 0.25
CACNB3-221ENST00000552022 TRIM28Q13263 835 aaKnown RBP16.63■□□□□ 0.25
CACNB3-221ENST00000552022 DACT2Q5SW24 774 aa16.63■□□□□ 0.25
CACNB3-221ENST00000552022 SLC10A4Q96EP9 437 aa16.63■□□□□ 0.25
CACNB3-221ENST00000552022 RANBP2P49792 3224 aaKnown RBP16.63■□□□□ 0.25
CACNB3-221ENST00000552022 COL6A3P12111 3177 aa16.62■□□□□ 0.25
CACNB3-221ENST00000552022 CRHR2Q13324 411 aa16.62■□□□□ 0.25
CACNB3-221ENST00000552022 OGFOD1Q8N543 542 aa16.62■□□□□ 0.25
CACNB3-221ENST00000552022 TMEM106CQ9BVX2 250 aa16.62■□□□□ 0.25
CACNB3-221ENST00000552022 EFCC1Q9HA90 598 aa16.62■□□□□ 0.25
CACNB3-221ENST00000552022 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-221ENST00000552022 A0A0C4DFX4 3053 aa16.62■□□□□ 0.25
CACNB3-221ENST00000552022 XDHP47989 1333 aa16.62■□□□□ 0.25
CACNB3-221ENST00000552022 ZBTB48P10074 688 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-221ENST00000552022 ATP2B4P23634 1241 aa16.61■□□□□ 0.25
CACNB3-221ENST00000552022 RIPK4P57078 832 aa16.61■□□□□ 0.25
CACNB3-221ENST00000552022 WNK4Q96J92 1243 aa16.61■□□□□ 0.25
CACNB3-221ENST00000552022 ZNF333Q96JL9 665 aa16.61■□□□□ 0.25
CACNB3-221ENST00000552022 CLMNQ96JQ2 1002 aa16.61■□□□□ 0.25
CACNB3-221ENST00000552022 MAPK8IP3Q9UPT6 1336 aa16.61■□□□□ 0.25
CACNB3-221ENST00000552022 SP3Q02447 781 aa16.6■□□□□ 0.25
CACNB3-221ENST00000552022 MAP3K11Q16584 847 aa16.6■□□□□ 0.25
CACNB3-221ENST00000552022 APOBEC3FQ8IUX4 373 aaKnown RBP16.6■□□□□ 0.25
CACNB3-221ENST00000552022 ZBTB38Q8NAP3 1195 aaPredicted RBP16.6■□□□□ 0.25
CACNB3-221ENST00000552022 ZBED3Q96IU2 234 aaPredicted RBP16.6■□□□□ 0.25
CACNB3-221ENST00000552022 CCDC85AQ96PX6 553 aaPredicted RBP16.6■□□□□ 0.25
CACNB3-221ENST00000552022 STRIP1Q5VSL9 837 aa16.59■□□□□ 0.25
CACNB3-221ENST00000552022 SPEF2Q9C093 1822 aa16.59■□□□□ 0.25
CACNB3-221ENST00000552022 CCDC152Q4G0S7 254 aa16.58■□□□□ 0.24
CACNB3-221ENST00000552022 SLC17A8Q8NDX2 589 aa16.58■□□□□ 0.24
CACNB3-221ENST00000552022 FBXW7Q969H0 707 aa16.58■□□□□ 0.24
CACNB3-221ENST00000552022 PTPN18Q99952 460 aa16.58■□□□□ 0.24
CACNB3-221ENST00000552022 PNNQ9H307 717 aaKnown RBP16.58■□□□□ 0.24
CACNB3-221ENST00000552022 MYO3BQ8WXR4 1341 aa16.58■□□□□ 0.24
CACNB3-221ENST00000552022 ECM29Q5VYK3 1845 aa16.57■□□□□ 0.24
CACNB3-221ENST00000552022 SSC5DA1L4H1 1573 aa16.57■□□□□ 0.24
CACNB3-221ENST00000552022 MED23Q9ULK4 1368 aa16.57■□□□□ 0.24
CACNB3-221ENST00000552022 CHL1O00533 1208 aa16.57■□□□□ 0.24
CACNB3-221ENST00000552022 GJA5P36382 358 aa16.57■□□□□ 0.24
CACNB3-221ENST00000552022 MMP14P50281 582 aa16.57■□□□□ 0.24
CACNB3-221ENST00000552022 HDGFL1Q5TGJ6 251 aa16.57■□□□□ 0.24
CACNB3-221ENST00000552022 CHRDL2Q6WN34 429 aa16.57■□□□□ 0.24
CACNB3-221ENST00000552022 ANKRD18AQ8IVF6 992 aa16.57■□□□□ 0.24
CACNB3-221ENST00000552022 JARID2Q92833 1246 aaPredicted RBP16.57■□□□□ 0.24
CACNB3-221ENST00000552022 DEFB129Q9H1M3 183 aa16.57■□□□□ 0.24
CACNB3-221ENST00000552022 DBF4Q9UBU7 674 aaPredicted RBP16.57■□□□□ 0.24
CACNB3-221ENST00000552022 PDE8AO60658 829 aa16.56■□□□□ 0.24
CACNB3-221ENST00000552022 OTUD7BQ6GQQ9 843 aa16.56■□□□□ 0.24
CACNB3-221ENST00000552022 TXNRD3Q86VQ6 643 aa16.56■□□□□ 0.24
CACNB3-221ENST00000552022 RBM27Q9P2N5 1060 aaKnown RBP16.56■□□□□ 0.24
CACNB3-221ENST00000552022 PTCH2Q9Y6C5 1203 aa16.56■□□□□ 0.24
CACNB3-221ENST00000552022 COL1A1P02452 1464 aaPredicted RBP16.55■□□□□ 0.24
CACNB3-221ENST00000552022 TESPA1A2RU30 521 aaPredicted RBP16.55■□□□□ 0.24
CACNB3-221ENST00000552022 PPP1R12BO60237 982 aaPredicted RBP16.55■□□□□ 0.24
CACNB3-221ENST00000552022 HSP90B1P14625 803 aaKnown RBP16.55■□□□□ 0.24
CACNB3-221ENST00000552022 SLC4A8Q2Y0W8 1093 aa16.55■□□□□ 0.24
CACNB3-221ENST00000552022 SLC9C1Q4G0N8 1177 aa16.55■□□□□ 0.24
CACNB3-221ENST00000552022 NBPF11Q86T75 865 aa16.55■□□□□ 0.24
CACNB3-221ENST00000552022 KIAA0825Q8IV33 1275 aa16.55■□□□□ 0.24
CACNB3-221ENST00000552022 HYPKQ9NX55 129 aa16.55■□□□□ 0.24
CACNB3-221ENST00000552022 MINPP1Q9UNW1 487 aa16.55■□□□□ 0.24
CACNB3-221ENST00000552022 UNCXA6NJT0 531 aa16.54■□□□□ 0.24
CACNB3-221ENST00000552022 MYCP01106 439 aaPredicted RBP16.54■□□□□ 0.24
CACNB3-221ENST00000552022 PCCAP05165 728 aaPredicted RBP16.54■□□□□ 0.24
CACNB3-221ENST00000552022 TMPOP42166 694 aaKnown RBP16.54■□□□□ 0.24
CACNB3-221ENST00000552022 TTLL5Q6EMB2 1281 aa16.54■□□□□ 0.24
CACNB3-221ENST00000552022 COA1Q9GZY4 146 aa16.54■□□□□ 0.24
CACNB3-221ENST00000552022 MYH3P11055 1940 aa16.53■□□□□ 0.24
CACNB3-221ENST00000552022 CCT4P50991 539 aaKnown RBP16.53■□□□□ 0.24
CACNB3-221ENST00000552022 RIC3Q7Z5B4 369 aa16.53■□□□□ 0.24
CACNB3-221ENST00000552022 CCER1Q8TC90 406 aaPredicted RBP16.53■□□□□ 0.24
CACNB3-221ENST00000552022 ZSWIM8A7E2V4 1837 aa16.53■□□□□ 0.24
CACNB3-221ENST00000552022 OTOFQ9HC10 1997 aa16.53■□□□□ 0.24
CACNB3-221ENST00000552022 USP2O75604 605 aaPredicted RBP16.52■□□□□ 0.24
CACNB3-221ENST00000552022 HOXB7P09629 217 aa16.52■□□□□ 0.24
CACNB3-221ENST00000552022 CCDC191Q8NCU4 936 aa16.52■□□□□ 0.24
CACNB3-221ENST00000552022 MYD88Q99836 296 aa16.52■□□□□ 0.24
CACNB3-221ENST00000552022 BSDC1Q9NW68 430 aaPredicted RBP16.52■□□□□ 0.24
CACNB3-221ENST00000552022 PCDHAC2Q9Y5I4 1007 aa16.52■□□□□ 0.24
CACNB3-221ENST00000552022 LMOD3Q0VAK6 560 aa16.51■□□□□ 0.23
CACNB3-221ENST00000552022 NBPF12Q5TAG4 269 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-221ENST00000552022 MS4A4AQ96JQ5 239 aa16.51■□□□□ 0.23
CACNB3-221ENST00000552022 PRO3102Q9H379 93 aa16.51■□□□□ 0.23
CACNB3-221ENST00000552022 LAS1LQ9Y4W2 734 aaKnown RBP16.51■□□□□ 0.23
CACNB3-221ENST00000552022 PPP2R3BQ9Y5P8 575 aa16.51■□□□□ 0.23
CACNB3-221ENST00000552022 KLRK1P26718 216 aa16.5■□□□□ 0.23
CACNB3-221ENST00000552022 GTF2IP78347 998 aa16.5■□□□□ 0.23
CACNB3-221ENST00000552022 DLGAP5Q15398 846 aa16.5■□□□□ 0.23
CACNB3-221ENST00000552022 MTMR14Q8NCE2 650 aa16.5■□□□□ 0.23
CACNB3-221ENST00000552022 SH3TC2Q8TF17 1288 aa16.5■□□□□ 0.23
CACNB3-221ENST00000552022 CDC5LQ99459 802 aaKnown RBP16.5■□□□□ 0.23
CACNB3-221ENST00000552022 PHAXQ9H814 394 aaKnown RBP16.5■□□□□ 0.23
CACNB3-221ENST00000552022 CUL9Q8IWT3 2517 aa16.5■□□□□ 0.23
CACNB3-221ENST00000552022 IREB2P48200 963 aaKnown RBP16.49■□□□□ 0.23
CACNB3-221ENST00000552022 ARHGEF6Q15052 776 aa16.49■□□□□ 0.23
CACNB3-221ENST00000552022 SUPT20HL1Q3ZLR7 823 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms