RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 INHBEP58166 350 aa13.64□□□□□ -0.23
SLC48A1-209ENST00000552003 EYA3Q99504 573 aa13.64□□□□□ -0.23
SLC48A1-209ENST00000552003 ZBTB7BO15156 539 aaPredicted RBP13.63□□□□□ -0.23
SLC48A1-209ENST00000552003 PER1O15534 1290 aaPredicted RBP13.63□□□□□ -0.23
SLC48A1-209ENST00000552003 MTFR1Q15390 333 aa13.63□□□□□ -0.23
SLC48A1-209ENST00000552003 CC2D1BQ5T0F9 858 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-209ENST00000552003 ARMC9Q7Z3E5 817 aa13.63□□□□□ -0.23
SLC48A1-209ENST00000552003 RTF1Q92541 710 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-209ENST00000552003 ZC3H12CQ9C0D7 883 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-209ENST00000552003 TRMT112Q9UI30 125 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-209ENST00000552003 SH3TC1Q8TE82 1336 aa13.63□□□□□ -0.23
SLC48A1-209ENST00000552003 SASH1O94885 1247 aa13.62□□□□□ -0.23
SLC48A1-209ENST00000552003 SF3B3Q15393 1217 aaKnown RBP13.62□□□□□ -0.23
SLC48A1-209ENST00000552003 NECTIN2Q92692 538 aa13.62□□□□□ -0.23
SLC48A1-209ENST00000552003 ARHGAP39Q9C0H5 1083 aa13.62□□□□□ -0.23
SLC48A1-209ENST00000552003 PODXL2Q9NZ53 605 aa13.62□□□□□ -0.23
SLC48A1-209ENST00000552003 TESPA1A2RU30 521 aaPredicted RBP13.61□□□□□ -0.23
SLC48A1-209ENST00000552003 ZBTB48P10074 688 aaPredicted RBP13.61□□□□□ -0.23
SLC48A1-209ENST00000552003 MAP3K11Q16584 847 aa13.61□□□□□ -0.23
SLC48A1-209ENST00000552003 NBPF11Q86T75 865 aa13.61□□□□□ -0.23
SLC48A1-209ENST00000552003 SLC10A4Q96EP9 437 aa13.61□□□□□ -0.23
SLC48A1-209ENST00000552003 STXBP5LQ9Y2K9 1186 aa13.61□□□□□ -0.23
SLC48A1-209ENST00000552003 PRUNE2Q8WUY3 3088 aa13.61□□□□□ -0.23
SLC48A1-209ENST00000552003 NF2P35240 595 aa13.6□□□□□ -0.23
SLC48A1-209ENST00000552003 POTEDQ86YR6 584 aa13.6□□□□□ -0.23
SLC48A1-209ENST00000552003 DEFB123Q8N688 67 aa13.6□□□□□ -0.23
SLC48A1-209ENST00000552003 STAP2Q9UGK3 403 aa13.6□□□□□ -0.23
SLC48A1-209ENST00000552003 DLG5Q8TDM6 1919 aa13.59□□□□□ -0.23
SLC48A1-209ENST00000552003 ALPK3Q96L96 1907 aa13.59□□□□□ -0.23
SLC48A1-209ENST00000552003 A0A1W2PPC1 479 aa13.59□□□□□ -0.23
SLC48A1-209ENST00000552003 HTATSF1O43719 755 aaKnown RBP13.59□□□□□ -0.23
SLC48A1-209ENST00000552003 UFL1O94874 794 aa13.59□□□□□ -0.23
SLC48A1-209ENST00000552003 DACT2Q5SW24 774 aa13.59□□□□□ -0.23
SLC48A1-209ENST00000552003 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
SLC48A1-209ENST00000552003 ZBED3Q96IU2 234 aaPredicted RBP13.59□□□□□ -0.23
SLC48A1-209ENST00000552003 SEC31BQ9NQW1 1179 aa13.59□□□□□ -0.23
SLC48A1-209ENST00000552003 MTMR10Q9NXD2 777 aa13.59□□□□□ -0.23
SLC48A1-209ENST00000552003 ERBB4Q15303 1308 aa13.59□□□□□ -0.23
SLC48A1-209ENST00000552003 USP17L3A6NCW0 530 aa13.58□□□□□ -0.24
SLC48A1-209ENST00000552003 USP17L4A6NCW7 530 aa13.58□□□□□ -0.24
SLC48A1-209ENST00000552003 RPS8P62241 208 aaKnown RBP13.58□□□□□ -0.24
SLC48A1-209ENST00000552003 USP17L1Q7RTZ2 530 aa13.58□□□□□ -0.24
SLC48A1-209ENST00000552003 MS4A4AQ96JQ5 239 aa13.58□□□□□ -0.24
SLC48A1-209ENST00000552003 LAMA2P24043 3122 aaKnown RBP13.57□□□□□ -0.24
SLC48A1-209ENST00000552003 COPS6Q7L5N1 327 aa13.57□□□□□ -0.24
SLC48A1-209ENST00000552003 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.57□□□□□ -0.24
SLC48A1-209ENST00000552003 PRDM6Q9NQX0 595 aa13.57□□□□□ -0.24
SLC48A1-209ENST00000552003 OTOFQ9HC10 1997 aa13.56□□□□□ -0.24
SLC48A1-209ENST00000552003 CTGFP29279 349 aa13.56□□□□□ -0.24
SLC48A1-209ENST00000552003 AIMP1Q12904 312 aaKnown RBP13.56□□□□□ -0.24
SLC48A1-209ENST00000552003 XAGE3Q8WTP9 111 aa13.56□□□□□ -0.24
SLC48A1-209ENST00000552003 BRI3BPQ8WY22 251 aa13.56□□□□□ -0.24
SLC48A1-209ENST00000552003 GGA1Q9UJY5 639 aa13.56□□□□□ -0.24
SLC48A1-209ENST00000552003 PCDHAC2Q9Y5I4 1007 aa13.56□□□□□ -0.24
SLC48A1-209ENST00000552003 G3V3G9 751 aa13.55□□□□□ -0.24
SLC48A1-209ENST00000552003 EIF2S2P20042 333 aaKnown RBP13.55□□□□□ -0.24
SLC48A1-209ENST00000552003 CNGB1Q14028 1251 aaPredicted RBP13.55□□□□□ -0.24
SLC48A1-209ENST00000552003 RTL5Q5HYW3 569 aaPredicted RBP13.55□□□□□ -0.24
SLC48A1-209ENST00000552003 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
SLC48A1-209ENST00000552003 DEFB129Q9H1M3 183 aa13.55□□□□□ -0.24
SLC48A1-209ENST00000552003 AOX1Q06278 1338 aa13.55□□□□□ -0.24
SLC48A1-209ENST00000552003 USP2O75604 605 aaPredicted RBP13.54□□□□□ -0.24
SLC48A1-209ENST00000552003 GJA8P48165 433 aa13.54□□□□□ -0.24
SLC48A1-209ENST00000552003 EIF4G2P78344 907 aaKnown RBP eCLIP13.54□□□□□ -0.24
SLC48A1-209ENST00000552003 HSP90AB3PQ58FF7 597 aa13.54□□□□□ -0.24
SLC48A1-209ENST00000552003 GPR153Q6NV75 609 aa13.54□□□□□ -0.24
SLC48A1-209ENST00000552003 PODNQ7Z5L7 613 aa13.54□□□□□ -0.24
SLC48A1-209ENST00000552003 FAM43AQ8N2R8 423 aa13.54□□□□□ -0.24
SLC48A1-209ENST00000552003 ANKIB1Q9P2G1 1089 aa13.54□□□□□ -0.24
SLC48A1-209ENST00000552003 RAPGEFL1Q9UHV5 662 aa13.54□□□□□ -0.24
SLC48A1-209ENST00000552003 NR2E3Q9Y5X4 410 aa13.54□□□□□ -0.24
SLC48A1-209ENST00000552003 ECM2O94769 699 aaPredicted RBP13.53□□□□□ -0.24
SLC48A1-209ENST00000552003 NBPF12Q5TAG4 269 aaPredicted RBP13.53□□□□□ -0.24
SLC48A1-209ENST00000552003 OTUD7BQ6GQQ9 843 aa13.53□□□□□ -0.24
SLC48A1-209ENST00000552003 APOBEC3FQ8IUX4 373 aaKnown RBP13.53□□□□□ -0.24
SLC48A1-209ENST00000552003 PNISRQ8TF01 805 aaKnown RBP13.53□□□□□ -0.24
SLC48A1-209ENST00000552003 GDF15Q99988 308 aa13.53□□□□□ -0.24
SLC48A1-209ENST00000552003 ISCA1Q9BUE6 129 aa13.53□□□□□ -0.24
SLC48A1-209ENST00000552003 HTATIP2Q9BUP3 242 aa13.53□□□□□ -0.24
SLC48A1-209ENST00000552003 CDH23Q9H251 3354 aa13.52□□□□□ -0.24
SLC48A1-209ENST00000552003 ATP5J2-PTCD1G3V325 749 aa13.52□□□□□ -0.25
SLC48A1-209ENST00000552003 U2AF1L5P0DN76 240 aaPredicted RBP13.52□□□□□ -0.25
SLC48A1-209ENST00000552003 U2AF1Q01081 240 aaKnown RBP eCLIP13.52□□□□□ -0.25
SLC48A1-209ENST00000552003 TAF1CQ15572 869 aaPredicted RBP13.52□□□□□ -0.25
SLC48A1-209ENST00000552003 GJB1P08034 283 aa13.51□□□□□ -0.25
SLC48A1-209ENST00000552003 CCL5P13501 91 aa13.51□□□□□ -0.25
SLC48A1-209ENST00000552003 LACTBP83111 547 aaPredicted RBP13.51□□□□□ -0.25
SLC48A1-209ENST00000552003 TXNRD3Q86VQ6 643 aa13.51□□□□□ -0.25
SLC48A1-209ENST00000552003 OPTNQ96CV9 577 aa13.51□□□□□ -0.25
SLC48A1-209ENST00000552003 ELP3Q9H9T3 547 aa13.51□□□□□ -0.25
SLC48A1-209ENST00000552003 IRS4O14654 1257 aaPredicted RBP13.5□□□□□ -0.25
SLC48A1-209ENST00000552003 MYCNP04198 464 aaPredicted RBP13.5□□□□□ -0.25
SLC48A1-209ENST00000552003 BCAMP50895 628 aa13.5□□□□□ -0.25
SLC48A1-209ENST00000552003 KIAA0825Q8IV33 1275 aa13.5□□□□□ -0.25
SLC48A1-209ENST00000552003 OGFOD1Q8N543 542 aa13.5□□□□□ -0.25
SLC48A1-209ENST00000552003 ZFYVE28Q9HCC9 887 aa13.5□□□□□ -0.25
SLC48A1-209ENST00000552003 COL1A1P02452 1464 aaPredicted RBP13.49□□□□□ -0.25
SLC48A1-209ENST00000552003 ECM29Q5VYK3 1845 aa13.49□□□□□ -0.25
SLC48A1-209ENST00000552003 UNCXA6NJT0 531 aa13.49□□□□□ -0.25
SLC48A1-209ENST00000552003 PPP1R12BO60237 982 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms