RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 ZNF804BA4D1E1 1349 aa13.24□□□□□ -0.29
PTCH1-225ENST00000551845 ITGBL1O95965 494 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-225ENST00000551845 HELBQ8NG08 1087 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-225ENST00000551845 PUS3Q9BZE2 481 aaKnown RBP13.24□□□□□ -0.29
PTCH1-225ENST00000551845 DDX19BQ9UMR2 479 aa13.24□□□□□ -0.29
PTCH1-225ENST00000551845 RIPOR2Q9Y4F9 1068 aa13.24□□□□□ -0.29
PTCH1-225ENST00000551845 MROH5Q6ZUA9 1318 aa13.23□□□□□ -0.29
PTCH1-225ENST00000551845 WDR33Q9C0J8 1336 aaKnown RBP13.23□□□□□ -0.29
PTCH1-225ENST00000551845 SRGAP3O43295 1099 aa13.23□□□□□ -0.29
PTCH1-225ENST00000551845 TAF5LO75529 589 aa13.23□□□□□ -0.29
PTCH1-225ENST00000551845 RFX5P48382 616 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-225ENST00000551845 PTPN12Q05209 780 aaKnown RBP13.23□□□□□ -0.29
PTCH1-225ENST00000551845 MVPQ14764 893 aaKnown RBP13.23□□□□□ -0.29
PTCH1-225ENST00000551845 DOK7Q18PE1 504 aa13.23□□□□□ -0.29
PTCH1-225ENST00000551845 KLHDC4Q8TBB5 520 aa13.23□□□□□ -0.29
PTCH1-225ENST00000551845 HACL1Q9UJ83 578 aa13.23□□□□□ -0.29
PTCH1-225ENST00000551845 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
PTCH1-225ENST00000551845 ABT1Q9ULW3 272 aaKnown RBP13.23□□□□□ -0.29
PTCH1-225ENST00000551845 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
PTCH1-225ENST00000551845 RASSF10A6NK89 507 aa13.22□□□□□ -0.29
PTCH1-225ENST00000551845 EYA2O00167 538 aa13.22□□□□□ -0.29
PTCH1-225ENST00000551845 ATP8B2P98198 1209 aa13.22□□□□□ -0.29
PTCH1-225ENST00000551845 MTX1Q13505 466 aa13.22□□□□□ -0.29
PTCH1-225ENST00000551845 TNIP1Q15025 636 aa13.22□□□□□ -0.29
PTCH1-225ENST00000551845 LRRC24Q50LG9 513 aa13.22□□□□□ -0.29
PTCH1-225ENST00000551845 PAXIP1Q6ZW49 1069 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-225ENST00000551845 PODNQ7Z5L7 613 aa13.22□□□□□ -0.29
PTCH1-225ENST00000551845 GPC2Q8N158 579 aa13.22□□□□□ -0.29
PTCH1-225ENST00000551845 L3MBTL3Q96JM7 780 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-225ENST00000551845 GPR101Q96P66 508 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-225ENST00000551845 BEGAINQ9BUH8 593 aa13.22□□□□□ -0.29
PTCH1-225ENST00000551845 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
PTCH1-225ENST00000551845 DBNDD1Q9H9R9 158 aa13.22□□□□□ -0.29
PTCH1-225ENST00000551845 COPRSQ9NQ92 184 aa13.22□□□□□ -0.29
PTCH1-225ENST00000551845 GJA3Q9Y6H8 435 aa13.22□□□□□ -0.29
PTCH1-225ENST00000551845 DDX60Q8IY21 1712 aaKnown RBP13.22□□□□□ -0.29
PTCH1-225ENST00000551845 WTIPA6NIX2 430 aaPredicted RBP13.21□□□□□ -0.29
PTCH1-225ENST00000551845 EPHX2P34913 555 aa13.21□□□□□ -0.29
PTCH1-225ENST00000551845 CXCL9Q07325 125 aa13.21□□□□□ -0.29
PTCH1-225ENST00000551845 UBE4AQ14139 1066 aa13.21□□□□□ -0.29
PTCH1-225ENST00000551845 METTL24Q5JXM2 366 aa13.21□□□□□ -0.29
PTCH1-225ENST00000551845 MAP1SQ66K74 1059 aaPredicted RBP13.21□□□□□ -0.29
PTCH1-225ENST00000551845 CIAPIN1Q6FI81 312 aa13.21□□□□□ -0.29
PTCH1-225ENST00000551845 CNTROBQ8N137 903 aa13.21□□□□□ -0.29
PTCH1-225ENST00000551845 ECE2O60344 883 aa13.2□□□□□ -0.3
PTCH1-225ENST00000551845 RAD17O75943 681 aa13.2□□□□□ -0.3
PTCH1-225ENST00000551845 CIAO1O76071 339 aa13.2□□□□□ -0.3
PTCH1-225ENST00000551845 PDE8BO95263 885 aa13.2□□□□□ -0.3
PTCH1-225ENST00000551845 GRM1Q13255 1194 aa13.2□□□□□ -0.3
PTCH1-225ENST00000551845 COA1Q9GZY4 146 aa13.2□□□□□ -0.3
PTCH1-225ENST00000551845 CEP126Q9P2H0 1117 aa13.2□□□□□ -0.3
PTCH1-225ENST00000551845 ZNF541Q9H0D2 1346 aa13.19□□□□□ -0.3
PTCH1-225ENST00000551845 SNAP23O00161 211 aa13.19□□□□□ -0.3
PTCH1-225ENST00000551845 IL15P40933 162 aaPredicted RBP13.19□□□□□ -0.3
PTCH1-225ENST00000551845 G3BP1Q13283 466 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTCH1-225ENST00000551845 C20orf194Q5TEA3 1177 aa13.19□□□□□ -0.3
PTCH1-225ENST00000551845 C15orf52Q6ZUT6 534 aaKnown RBP13.19□□□□□ -0.3
PTCH1-225ENST00000551845 PNMA8AQ86V59 439 aaPredicted RBP13.19□□□□□ -0.3
PTCH1-225ENST00000551845 SIL1Q9H173 461 aa13.19□□□□□ -0.3
PTCH1-225ENST00000551845 C1orf115Q9H7X2 142 aa13.19□□□□□ -0.3
PTCH1-225ENST00000551845 PNMA6EA0A0J9YXQ4 647 aa13.18□□□□□ -0.3
PTCH1-225ENST00000551845 YDJCA8MPS7 323 aa13.18□□□□□ -0.3
PTCH1-225ENST00000551845 LMOD1P29536 600 aaPredicted RBP13.18□□□□□ -0.3
PTCH1-225ENST00000551845 RGS19P49795 217 aa13.18□□□□□ -0.3
PTCH1-225ENST00000551845 RRP1P56182 461 aaKnown RBP13.18□□□□□ -0.3
PTCH1-225ENST00000551845 ATG9AQ7Z3C6 839 aa13.18□□□□□ -0.3
PTCH1-225ENST00000551845 TXNRD3Q86VQ6 643 aa13.18□□□□□ -0.3
PTCH1-225ENST00000551845 RPAP2Q8IXW5 612 aaPredicted RBP13.18□□□□□ -0.3
PTCH1-225ENST00000551845 ZBTB40Q9NUA8 1239 aa13.18□□□□□ -0.3
PTCH1-225ENST00000551845 PA2G4Q9UQ80 394 aaKnown RBP13.18□□□□□ -0.3
PTCH1-225ENST00000551845 MED23Q9ULK4 1368 aa13.18□□□□□ -0.3
PTCH1-225ENST00000551845 IFIT1P09914 478 aaKnown RBP13.17□□□□□ -0.3
PTCH1-225ENST00000551845 ECE1P42892 770 aa13.17□□□□□ -0.3
PTCH1-225ENST00000551845 POLA2Q14181 598 aa13.17□□□□□ -0.3
PTCH1-225ENST00000551845 CAVIN4Q5BKX8 364 aa13.17□□□□□ -0.3
PTCH1-225ENST00000551845 ZNF804AQ7Z570 1209 aa13.17□□□□□ -0.3
PTCH1-225ENST00000551845 SSH3Q8TE77 659 aa13.17□□□□□ -0.3
PTCH1-225ENST00000551845 CAPNS2Q96L46 248 aa13.17□□□□□ -0.3
PTCH1-225ENST00000551845 CD209Q9NNX6 404 aa13.17□□□□□ -0.3
PTCH1-225ENST00000551845 KCNQ5Q9NR82 932 aa13.17□□□□□ -0.3
PTCH1-225ENST00000551845 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
PTCH1-225ENST00000551845 LAMB2P55268 1798 aa13.17□□□□□ -0.3
PTCH1-225ENST00000551845 USP17L3A6NCW0 530 aa13.16□□□□□ -0.3
PTCH1-225ENST00000551845 USP17L4A6NCW7 530 aa13.16□□□□□ -0.3
PTCH1-225ENST00000551845 PSMD14O00487 310 aa13.16□□□□□ -0.3
PTCH1-225ENST00000551845 SURF6O75683 361 aaKnown RBP13.16□□□□□ -0.3
PTCH1-225ENST00000551845 VIL1P09327 827 aaKnown RBP13.16□□□□□ -0.3
PTCH1-225ENST00000551845 KLRK1P26718 216 aa13.16□□□□□ -0.3
PTCH1-225ENST00000551845 HIBADHP31937 336 aaKnown RBP13.16□□□□□ -0.3
PTCH1-225ENST00000551845 PUM3Q15397 648 aaKnown RBP13.16□□□□□ -0.3
PTCH1-225ENST00000551845 USP17L1Q7RTZ2 530 aa13.16□□□□□ -0.3
PTCH1-225ENST00000551845 VPS37DQ86XT2 251 aa13.16□□□□□ -0.3
PTCH1-225ENST00000551845 VGLL2Q8N8G2 317 aa13.16□□□□□ -0.3
PTCH1-225ENST00000551845 LPIN2Q92539 896 aa13.16□□□□□ -0.3
PTCH1-225ENST00000551845 ADAMTSL1Q8N6G6 1762 aa13.16□□□□□ -0.3
PTCH1-225ENST00000551845 COL4A1P02462 1669 aa13.15□□□□□ -0.3
PTCH1-225ENST00000551845 H7C1D1 291 aa13.15□□□□□ -0.3
PTCH1-225ENST00000551845 RPS12P25398 132 aaKnown RBP13.15□□□□□ -0.3
PTCH1-225ENST00000551845 OS9Q13438 667 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-225ENST00000551845 STRIP1Q5VSL9 837 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms