RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 MANSC4A6NHS7 340 aaPredicted RBP13.34□□□□□ -0.27
BEST3-210ENST00000551160 TRIM28Q13263 835 aaKnown RBP13.34□□□□□ -0.27
BEST3-210ENST00000551160 ZBTB38Q8NAP3 1195 aaPredicted RBP13.34□□□□□ -0.27
BEST3-210ENST00000551160 JARID2Q92833 1246 aaPredicted RBP13.34□□□□□ -0.27
BEST3-210ENST00000551160 CLMNQ96JQ2 1002 aa13.34□□□□□ -0.27
BEST3-210ENST00000551160 ATP2B4P23634 1241 aa13.33□□□□□ -0.28
BEST3-210ENST00000551160 CCDC152Q4G0S7 254 aa13.33□□□□□ -0.28
BEST3-210ENST00000551160 OGFOD1Q8N543 542 aa13.33□□□□□ -0.28
BEST3-210ENST00000551160 ERO1AQ96HE7 468 aa13.33□□□□□ -0.28
BEST3-210ENST00000551160 CHL1O00533 1208 aa13.32□□□□□ -0.28
BEST3-210ENST00000551160 TMPOP42166 694 aaKnown RBP13.32□□□□□ -0.28
BEST3-210ENST00000551160 CRHR2Q13324 411 aa13.32□□□□□ -0.28
BEST3-210ENST00000551160 APOBEC3FQ8IUX4 373 aaKnown RBP13.32□□□□□ -0.28
BEST3-210ENST00000551160 ANKRD18AQ8IVF6 992 aa13.32□□□□□ -0.28
BEST3-210ENST00000551160 WNK4Q96J92 1243 aa13.32□□□□□ -0.28
BEST3-210ENST00000551160 PNNQ9H307 717 aaKnown RBP13.32□□□□□ -0.28
BEST3-210ENST00000551160 EFCC1Q9HA90 598 aa13.32□□□□□ -0.28
BEST3-210ENST00000551160 DBF4Q9UBU7 674 aaPredicted RBP13.32□□□□□ -0.28
BEST3-210ENST00000551160 LAS1LQ9Y4W2 734 aaKnown RBP13.32□□□□□ -0.28
BEST3-210ENST00000551160 SSC5DA1L4H1 1573 aa13.32□□□□□ -0.28
BEST3-210ENST00000551160 CEP290O15078 2479 aa13.32□□□□□ -0.28
BEST3-210ENST00000551160 BRCA2P51587 3418 aa13.32□□□□□ -0.28
BEST3-210ENST00000551160 MED23Q9ULK4 1368 aa13.32□□□□□ -0.28
BEST3-210ENST00000551160 H0YGN5 161 aa13.31□□□□□ -0.28
BEST3-210ENST00000551160 LMOD3Q0VAK6 560 aa13.31□□□□□ -0.28
BEST3-210ENST00000551160 SLC10A4Q96EP9 437 aa13.31□□□□□ -0.28
BEST3-210ENST00000551160 ZNF333Q96JL9 665 aa13.31□□□□□ -0.28
BEST3-210ENST00000551160 ZBTB48P10074 688 aaPredicted RBP13.3□□□□□ -0.28
BEST3-210ENST00000551160 GJA5P36382 358 aa13.3□□□□□ -0.28
BEST3-210ENST00000551160 INHBEP58166 350 aa13.3□□□□□ -0.28
BEST3-210ENST00000551160 STRIP1Q5VSL9 837 aa13.3□□□□□ -0.28
BEST3-210ENST00000551160 RIC3Q7Z5B4 369 aa13.3□□□□□ -0.28
BEST3-210ENST00000551160 TXNRD3Q86VQ6 643 aa13.3□□□□□ -0.28
BEST3-210ENST00000551160 KIAA0825Q8IV33 1275 aa13.3□□□□□ -0.28
BEST3-210ENST00000551160 ZBED3Q96IU2 234 aaPredicted RBP13.3□□□□□ -0.28
BEST3-210ENST00000551160 MYD88Q99836 296 aa13.3□□□□□ -0.28
BEST3-210ENST00000551160 DEFB129Q9H1M3 183 aa13.3□□□□□ -0.28
BEST3-210ENST00000551160 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
BEST3-210ENST00000551160 MYO3BQ8WXR4 1341 aa13.3□□□□□ -0.28
BEST3-210ENST00000551160 PDE8AO60658 829 aa13.29□□□□□ -0.28
BEST3-210ENST00000551160 PCCAP05165 728 aaPredicted RBP13.29□□□□□ -0.28
BEST3-210ENST00000551160 HOXB7P09629 217 aa13.29□□□□□ -0.28
BEST3-210ENST00000551160 HSP90B1P14625 803 aaKnown RBP13.29□□□□□ -0.28
BEST3-210ENST00000551160 KLRK1P26718 216 aa13.29□□□□□ -0.28
BEST3-210ENST00000551160 OTUD5Q96G74 571 aa13.29□□□□□ -0.28
BEST3-210ENST00000551160 TMEM106CQ9BVX2 250 aa13.29□□□□□ -0.28
BEST3-210ENST00000551160 CENPFP49454 3210 aa13.28□□□□□ -0.28
BEST3-210ENST00000551160 PSME4Q14997 1843 aa13.28□□□□□ -0.28
BEST3-210ENST00000551160 MYCP01106 439 aaPredicted RBP13.28□□□□□ -0.28
BEST3-210ENST00000551160 SP3Q02447 781 aa13.28□□□□□ -0.28
BEST3-210ENST00000551160 GOLGA2Q08379 1002 aa13.28□□□□□ -0.28
BEST3-210ENST00000551160 NEUROD2Q15784 382 aa13.28□□□□□ -0.28
BEST3-210ENST00000551160 MAP3K11Q16584 847 aa13.28□□□□□ -0.28
BEST3-210ENST00000551160 DUSP27Q5VZP5 1158 aa13.28□□□□□ -0.28
BEST3-210ENST00000551160 PTPN18Q99952 460 aa13.28□□□□□ -0.28
BEST3-210ENST00000551160 COA1Q9GZY4 146 aa13.28□□□□□ -0.28
BEST3-210ENST00000551160 MINPP1Q9UNW1 487 aa13.28□□□□□ -0.28
BEST3-210ENST00000551160 PTCH2Q9Y6C5 1203 aa13.28□□□□□ -0.28
BEST3-210ENST00000551160 SZT2Q5T011 3432 aa13.28□□□□□ -0.28
BEST3-210ENST00000551160 CCT4P50991 539 aaKnown RBP13.27□□□□□ -0.29
BEST3-210ENST00000551160 CTSWP56202 376 aa13.27□□□□□ -0.29
BEST3-210ENST00000551160 SLC4A8Q2Y0W8 1093 aa13.27□□□□□ -0.29
BEST3-210ENST00000551160 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.29
BEST3-210ENST00000551160 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.29
BEST3-210ENST00000551160 CDC5LQ99459 802 aaKnown RBP13.27□□□□□ -0.29
BEST3-210ENST00000551160 PHAXQ9H814 394 aaKnown RBP13.27□□□□□ -0.29
BEST3-210ENST00000551160 PCDHAC2Q9Y5I4 1007 aa13.27□□□□□ -0.29
BEST3-210ENST00000551160 COL1A1P02452 1464 aaPredicted RBP13.27□□□□□ -0.29
BEST3-210ENST00000551160 SLC9C1Q4G0N8 1177 aa13.26□□□□□ -0.29
BEST3-210ENST00000551160 CCDC146Q8IYE0 955 aa13.26□□□□□ -0.29
BEST3-210ENST00000551160 CCDC191Q8NCU4 936 aa13.26□□□□□ -0.29
BEST3-210ENST00000551160 GREM2Q9H772 168 aa13.26□□□□□ -0.29
BEST3-210ENST00000551160 BSDC1Q9NW68 430 aaPredicted RBP13.26□□□□□ -0.29
BEST3-210ENST00000551160 CWC25Q9NXE8 425 aaPredicted RBP13.26□□□□□ -0.29
BEST3-210ENST00000551160 TRIM35Q9UPQ4 493 aa13.26□□□□□ -0.29
BEST3-210ENST00000551160 RBBP6Q7Z6E9 1792 aaKnown RBP13.25□□□□□ -0.29
BEST3-210ENST00000551160 AOX1Q06278 1338 aa13.25□□□□□ -0.29
BEST3-210ENST00000551160 CLRN2A0PK11 232 aa13.25□□□□□ -0.29
BEST3-210ENST00000551160 DLL1O00548 723 aa13.25□□□□□ -0.29
BEST3-210ENST00000551160 PPP1R12BO60237 982 aaPredicted RBP13.25□□□□□ -0.29
BEST3-210ENST00000551160 GTF2IP78347 998 aa13.25□□□□□ -0.29
BEST3-210ENST00000551160 OTUD7BQ6GQQ9 843 aa13.25□□□□□ -0.29
BEST3-210ENST00000551160 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
BEST3-210ENST00000551160 MMP14P50281 582 aa13.24□□□□□ -0.29
BEST3-210ENST00000551160 DLGAP5Q15398 846 aa13.24□□□□□ -0.29
BEST3-210ENST00000551160 NBPF12Q5TAG4 269 aaPredicted RBP13.24□□□□□ -0.29
BEST3-210ENST00000551160 CERS5Q8N5B7 392 aa13.24□□□□□ -0.29
BEST3-210ENST00000551160 TTLL11Q8NHH1 800 aa13.24□□□□□ -0.29
BEST3-210ENST00000551160 RBM27Q9P2N5 1060 aaKnown RBP13.24□□□□□ -0.29
BEST3-210ENST00000551160 PPP2R3BQ9Y5P8 575 aa13.24□□□□□ -0.29
BEST3-210ENST00000551160 ZNF646O15015 1829 aaPredicted RBP13.24□□□□□ -0.29
BEST3-210ENST00000551160 ZNF804BA4D1E1 1349 aa13.23□□□□□ -0.29
BEST3-210ENST00000551160 USP2O75604 605 aaPredicted RBP13.23□□□□□ -0.29
BEST3-210ENST00000551160 IREB2P48200 963 aaKnown RBP13.23□□□□□ -0.29
BEST3-210ENST00000551160 SH3TC2Q8TF17 1288 aa13.23□□□□□ -0.29
BEST3-210ENST00000551160 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
BEST3-210ENST00000551160 ELP3Q9H9T3 547 aa13.23□□□□□ -0.29
BEST3-210ENST00000551160 VEZTQ9HBM0 779 aa13.23□□□□□ -0.29
BEST3-210ENST00000551160 MBIPQ9NS73 344 aa13.23□□□□□ -0.29
BEST3-210ENST00000551160 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms