RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ATCAYQ86WG3 371 aa8.07□□□□□ -1.12
SCAF11-214ENST00000550893 TLR7Q9NYK1 1049 aaKnown RBP8.07□□□□□ -1.12
SCAF11-214ENST00000550893 ITSN2Q9NZM3 1697 aa8.07□□□□□ -1.12
SCAF11-214ENST00000550893 ADGRL1O94910 1474 aa8.06□□□□□ -1.12
SCAF11-214ENST00000550893 NEO1Q92859 1461 aa8.06□□□□□ -1.12
SCAF11-214ENST00000550893 CFAP74Q9C0B2 1584 aa8.06□□□□□ -1.12
SCAF11-214ENST00000550893 CASKIN1Q8WXD9 1431 aa8.06□□□□□ -1.12
SCAF11-214ENST00000550893 UBAP1LF5GYI3 381 aa8.06□□□□□ -1.12
SCAF11-214ENST00000550893 RGS9O75916 674 aaPredicted RBP8.06□□□□□ -1.12
SCAF11-214ENST00000550893 NRLP54845 237 aa8.06□□□□□ -1.12
SCAF11-214ENST00000550893 GPLD1P80108 840 aa8.06□□□□□ -1.12
SCAF11-214ENST00000550893 HFE2Q6ZVN8 426 aa8.06□□□□□ -1.12
SCAF11-214ENST00000550893 SPOCK3Q9BQ16 436 aa8.06□□□□□ -1.12
SCAF11-214ENST00000550893 BCORL1Q5H9F3 1711 aa8.06□□□□□ -1.12
SCAF11-214ENST00000550893 FYCO1Q9BQS8 1478 aa8.06□□□□□ -1.12
SCAF11-214ENST00000550893 KDM5CP41229 1560 aa8.05□□□□□ -1.12
SCAF11-214ENST00000550893 FMN1Q68DA7 1419 aa8.05□□□□□ -1.12
SCAF11-214ENST00000550893 SPDYE3A6NKU9 549 aa8.05□□□□□ -1.12
SCAF11-214ENST00000550893 MSTNO14793 375 aa8.05□□□□□ -1.12
SCAF11-214ENST00000550893 AFF1P51825 1210 aaKnown RBP8.05□□□□□ -1.12
SCAF11-214ENST00000550893 MTMR3Q13615 1198 aa8.05□□□□□ -1.12
SCAF11-214ENST00000550893 PERM1Q5SV97 790 aa8.05□□□□□ -1.12
SCAF11-214ENST00000550893 NLRP13Q86W25 1043 aa8.05□□□□□ -1.12
SCAF11-214ENST00000550893 LPIN3Q9BQK8 851 aa8.05□□□□□ -1.12
SCAF11-214ENST00000550893 USTQ9Y2C2 406 aa8.05□□□□□ -1.12
SCAF11-214ENST00000550893 ABCC1P33527 1531 aa8.04□□□□□ -1.12
SCAF11-214ENST00000550893 ARHGEF12Q9NZN5 1544 aa8.04□□□□□ -1.12
SCAF11-214ENST00000550893 FAM229AH3BQW9 127 aa8.04□□□□□ -1.12
SCAF11-214ENST00000550893 PROCP04070 461 aa8.04□□□□□ -1.12
SCAF11-214ENST00000550893 PSAPP07602 524 aa8.04□□□□□ -1.12
SCAF11-214ENST00000550893 SPATA31C1P0DKV0 1188 aa8.04□□□□□ -1.12
SCAF11-214ENST00000550893 ARID4AP29374 1257 aaPredicted RBP8.04□□□□□ -1.12
SCAF11-214ENST00000550893 PLAURQ03405 335 aa8.04□□□□□ -1.12
SCAF11-214ENST00000550893 SAMD9LQ8IVG5 1584 aa8.04□□□□□ -1.12
SCAF11-214ENST00000550893 ABCA6Q8N139 1617 aa8.03□□□□□ -1.12
SCAF11-214ENST00000550893 C1QTNF9BB2RNN3 333 aa8.03□□□□□ -1.12
SCAF11-214ENST00000550893 MPSTP25325 297 aa8.03□□□□□ -1.12
SCAF11-214ENST00000550893 CHRNA4P43681 627 aa8.03□□□□□ -1.12
SCAF11-214ENST00000550893 PRRT3Q5FWE3 981 aa8.03□□□□□ -1.12
SCAF11-214ENST00000550893 TRAPPC3LQ5T215 181 aa8.03□□□□□ -1.12
SCAF11-214ENST00000550893 XP32Q5T750 250 aa8.03□□□□□ -1.12
SCAF11-214ENST00000550893 ELMSAN1Q6PJG2 1045 aa8.03□□□□□ -1.12
SCAF11-214ENST00000550893 CD163Q86VB7 1156 aa8.03□□□□□ -1.12
SCAF11-214ENST00000550893 NUDT16Q96DE0 195 aaKnown RBP8.03□□□□□ -1.12
SCAF11-214ENST00000550893 FRRS1LQ9P0K9 344 aa8.03□□□□□ -1.12
SCAF11-214ENST00000550893 FNDC3AQ9Y2H6 1198 aaKnown RBP8.03□□□□□ -1.12
SCAF11-214ENST00000550893 MADDQ8WXG6 1647 aa8.03□□□□□ -1.12
SCAF11-214ENST00000550893 CLIP1P30622 1438 aa8.03□□□□□ -1.12
SCAF11-214ENST00000550893 TROQ12816 1431 aaPredicted RBP8.03□□□□□ -1.12
SCAF11-214ENST00000550893 TIAM1Q13009 1591 aa8.02□□□□□ -1.13
SCAF11-214ENST00000550893 LOC102724428A0A0B4J2F2 783 aa8.02□□□□□ -1.13
SCAF11-214ENST00000550893 J3QW42 95 aa8.02□□□□□ -1.13
SCAF11-214ENST00000550893 SOX18P35713 384 aa8.02□□□□□ -1.13
SCAF11-214ENST00000550893 EIF1AXP47813 144 aaKnown RBP8.02□□□□□ -1.13
SCAF11-214ENST00000550893 SIK1P57059 783 aa8.02□□□□□ -1.13
SCAF11-214ENST00000550893 TRIM28Q13263 835 aaKnown RBP8.02□□□□□ -1.13
SCAF11-214ENST00000550893 GRIK5Q16478 980 aa8.02□□□□□ -1.13
SCAF11-214ENST00000550893 NOM1Q5C9Z4 860 aaKnown RBP8.02□□□□□ -1.13
SCAF11-214ENST00000550893 NSUN5Q96P11 429 aaKnown RBP8.02□□□□□ -1.13
SCAF11-214ENST00000550893 SMG9Q9H0W8 520 aaKnown RBP8.02□□□□□ -1.13
SCAF11-214ENST00000550893 KIDINS220Q9ULH0 1771 aa8.02□□□□□ -1.13
SCAF11-214ENST00000550893 DIP2CQ9Y2E4 1556 aa8.01□□□□□ -1.13
SCAF11-214ENST00000550893 FANCAO15360 1455 aa8.01□□□□□ -1.13
SCAF11-214ENST00000550893 HOXD8P13378 290 aaPredicted RBP8.01□□□□□ -1.13
SCAF11-214ENST00000550893 EIF2AK2P19525 551 aaKnown RBP8.01□□□□□ -1.13
SCAF11-214ENST00000550893 RANGAP1P46060 587 aaPredicted RBP8.01□□□□□ -1.13
SCAF11-214ENST00000550893 DNM1Q05193 864 aaKnown RBP8.01□□□□□ -1.13
SCAF11-214ENST00000550893 DMRTC2Q8IXT2 367 aaPredicted RBP8.01□□□□□ -1.13
SCAF11-214ENST00000550893 OR13H1Q8NG92 308 aa8.01□□□□□ -1.13
SCAF11-214ENST00000550893 EDEM1Q92611 657 aa8.01□□□□□ -1.13
SCAF11-214ENST00000550893 PLCH2O75038 1416 aa8.01□□□□□ -1.13
SCAF11-214ENST00000550893 CEP162Q5TB80 1403 aa8.01□□□□□ -1.13
SCAF11-214ENST00000550893 POGZQ7Z3K3 1410 aa8.01□□□□□ -1.13
SCAF11-214ENST00000550893 YEATS2Q9ULM3 1422 aa8.01□□□□□ -1.13
SCAF11-214ENST00000550893 CCDC18Q5T9S5 1454 aa8□□□□□ -1.13
SCAF11-214ENST00000550893 A0A0A0MRY4 1105 aa8□□□□□ -1.13
SCAF11-214ENST00000550893 ABL1P00519 1130 aa8□□□□□ -1.13
SCAF11-214ENST00000550893 ILDR2Q71H61 639 aa8□□□□□ -1.13
SCAF11-214ENST00000550893 RETREG2Q8NC44 543 aa8□□□□□ -1.13
SCAF11-214ENST00000550893 TTC9Q92623 222 aa8□□□□□ -1.13
SCAF11-214ENST00000550893 MTMR7Q9Y216 660 aa8□□□□□ -1.13
SCAF11-214ENST00000550893 INO80Q9ULG1 1556 aaPredicted RBP8□□□□□ -1.13
SCAF11-214ENST00000550893 GHRHP01286 108 aa7.99□□□□□ -1.13
SCAF11-214ENST00000550893 PDGFAP04085 211 aa7.99□□□□□ -1.13
SCAF11-214ENST00000550893 NPR3P17342 541 aa7.99□□□□□ -1.13
SCAF11-214ENST00000550893 GRIK4Q16099 956 aa7.99□□□□□ -1.13
SCAF11-214ENST00000550893 COL13A1Q5TAT6 717 aaPredicted RBP7.99□□□□□ -1.13
SCAF11-214ENST00000550893 TTC39BQ5VTQ0 682 aaPredicted RBP7.99□□□□□ -1.13
SCAF11-214ENST00000550893 MSL1Q68DK7 614 aa7.99□□□□□ -1.13
SCAF11-214ENST00000550893 AKNAQ7Z591 1439 aa7.99□□□□□ -1.13
SCAF11-214ENST00000550893 PLD4Q96BZ4 506 aa7.99□□□□□ -1.13
SCAF11-214ENST00000550893 GGNBP2Q9H3C7 697 aa7.99□□□□□ -1.13
SCAF11-214ENST00000550893 ELP3Q9H9T3 547 aa7.99□□□□□ -1.13
SCAF11-214ENST00000550893 ANO2Q9NQ90 1003 aa7.99□□□□□ -1.13
SCAF11-214ENST00000550893 ABI2Q9NYB9 513 aaPredicted RBP7.99□□□□□ -1.13
SCAF11-214ENST00000550893 HECW2Q9P2P5 1572 aa7.98□□□□□ -1.13
SCAF11-214ENST00000550893 REREQ9P2R6 1566 aa7.98□□□□□ -1.13
SCAF11-214ENST00000550893 ADAM23O75077 832 aa7.98□□□□□ -1.13
SCAF11-214ENST00000550893 MZF1P28698 734 aaPredicted RBP7.98□□□□□ -1.13
SCAF11-214ENST00000550893 FKBP4Q02790 459 aaKnown RBP eCLIP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms