RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CASP7P55210 303 aa27.77■■■□□ 2.04
SMARCC2-210ENST00000550519 KIF23Q02241 960 aaPredicted RBP27.76■■■□□ 2.03
SMARCC2-210ENST00000550519 DACT2Q5SW24 774 aa27.76■■■□□ 2.03
SMARCC2-210ENST00000550519 LEMD3Q9Y2U8 911 aa27.76■■■□□ 2.03
SMARCC2-210ENST00000550519 FANCIQ9NVI1 1328 aa27.75■■■□□ 2.03
SMARCC2-210ENST00000550519 SLC10A3P09131 477 aa27.75■■■□□ 2.03
SMARCC2-210ENST00000550519 IGHMBP2P38935 993 aaKnown RBP27.75■■■□□ 2.03
SMARCC2-210ENST00000550519 DNAAF4Q8WXU2 420 aa27.75■■■□□ 2.03
SMARCC2-210ENST00000550519 MCOLN1Q9GZU1 580 aa27.75■■■□□ 2.03
SMARCC2-210ENST00000550519 COA1Q9GZY4 146 aa27.75■■■□□ 2.03
SMARCC2-210ENST00000550519 MYH3P11055 1940 aa27.75■■■□□ 2.03
SMARCC2-210ENST00000550519 CCDC85CA6NKD9 419 aa27.74■■■□□ 2.03
SMARCC2-210ENST00000550519 CSF1RP07333 972 aa27.74■■■□□ 2.03
SMARCC2-210ENST00000550519 ITGA6P23229 1130 aa27.74■■■□□ 2.03
SMARCC2-210ENST00000550519 TXNRD3Q86VQ6 643 aa27.74■■■□□ 2.03
SMARCC2-210ENST00000550519 LINS1Q8NG48 757 aa27.74■■■□□ 2.03
SMARCC2-210ENST00000550519 SAGE1Q9NXZ1 904 aa27.74■■■□□ 2.03
SMARCC2-210ENST00000550519 FKBP1BP68106 108 aa27.73■■■□□ 2.03
SMARCC2-210ENST00000550519 FKBP5Q13451 457 aaPredicted RBP27.73■■■□□ 2.03
SMARCC2-210ENST00000550519 STRIP1Q5VSL9 837 aa27.73■■■□□ 2.03
SMARCC2-210ENST00000550519 MYH16Q9H6N6 1097 aa27.73■■■□□ 2.03
SMARCC2-210ENST00000550519 MRS2Q9HD23 443 aa27.73■■■□□ 2.03
SMARCC2-210ENST00000550519 CASP8AP2Q9UKL3 1982 aa27.72■■■□□ 2.03
SMARCC2-210ENST00000550519 VAMP4O75379 141 aa27.72■■■□□ 2.03
SMARCC2-210ENST00000550519 FAM161AQ3B820 660 aa27.72■■■□□ 2.03
SMARCC2-210ENST00000550519 MXD3Q9BW11 206 aa27.72■■■□□ 2.03
SMARCC2-210ENST00000550519 MYO3BQ8WXR4 1341 aa27.71■■■□□ 2.03
SMARCC2-210ENST00000550519 NBPF9Q3BBW0 867 aa27.71■■■□□ 2.03
SMARCC2-210ENST00000550519 WDR63Q8IWG1 891 aa27.71■■■□□ 2.03
SMARCC2-210ENST00000550519 ANKRD2Q9GZV1 360 aa27.71■■■□□ 2.03
SMARCC2-210ENST00000550519 ZNF804BA4D1E1 1349 aa27.7■■■□□ 2.03
SMARCC2-210ENST00000550519 OGFOD1Q8N543 542 aa27.7■■■□□ 2.02
SMARCC2-210ENST00000550519 CSRNP1Q96S65 589 aa27.7■■■□□ 2.02
SMARCC2-210ENST00000550519 MPHOSPH8Q99549 860 aa27.7■■■□□ 2.02
SMARCC2-210ENST00000550519 RGS19P49795 217 aa27.69■■■□□ 2.02
SMARCC2-210ENST00000550519 DGKZQ13574 1117 aa27.69■■■□□ 2.02
SMARCC2-210ENST00000550519 RASAL3Q86YV0 1011 aa27.69■■■□□ 2.02
SMARCC2-210ENST00000550519 RNF186Q9NXI6 227 aa27.69■■■□□ 2.02
SMARCC2-210ENST00000550519 SCAF8Q9UPN6 1271 aaKnown RBP27.69■■■□□ 2.02
SMARCC2-210ENST00000550519 SPEF2Q9C093 1822 aa27.69■■■□□ 2.02
SMARCC2-210ENST00000550519 WNT10BO00744 389 aa27.68■■■□□ 2.02
SMARCC2-210ENST00000550519 KLRK1P26718 216 aa27.68■■■□□ 2.02
SMARCC2-210ENST00000550519 MMP14P50281 582 aa27.68■■■□□ 2.02
SMARCC2-210ENST00000550519 TRPA1O75762 1119 aa27.67■■■□□ 2.02
SMARCC2-210ENST00000550519 EXOSC9Q06265 439 aaKnown RBP27.67■■■□□ 2.02
SMARCC2-210ENST00000550519 TTLL5Q6EMB2 1281 aa27.67■■■□□ 2.02
SMARCC2-210ENST00000550519 FBXW7Q969H0 707 aa27.67■■■□□ 2.02
SMARCC2-210ENST00000550519 PAPPA2Q9BXP8 1791 aa27.66■■■□□ 2.02
SMARCC2-210ENST00000550519 CHRNDQ07001 517 aa27.66■■■□□ 2.02
SMARCC2-210ENST00000550519 REM2Q8IYK8 340 aaPredicted RBP27.66■■■□□ 2.02
SMARCC2-210ENST00000550519 SALL2Q9Y467 1007 aaPredicted RBP27.66■■■□□ 2.02
SMARCC2-210ENST00000550519 ZNF646O15015 1829 aaPredicted RBP27.66■■■□□ 2.02
SMARCC2-210ENST00000550519 PRAMEF18Q5VWM3 479 aa27.65■■■□□ 2.02
SMARCC2-210ENST00000550519 MOB2Q70IA6 237 aa27.65■■■□□ 2.02
SMARCC2-210ENST00000550519 ANKRD18BA2A2Z9 1011 aa27.64■■■□□ 2.02
SMARCC2-210ENST00000550519 ANP32CO43423 234 aa27.63■■■□□ 2.01
SMARCC2-210ENST00000550519 FOXO4P98177 505 aa27.63■■■□□ 2.01
SMARCC2-210ENST00000550519 BEND3Q5T5X7 828 aa27.63■■■□□ 2.01
SMARCC2-210ENST00000550519 IRS2Q9Y4H2 1338 aa27.63■■■□□ 2.01
SMARCC2-210ENST00000550519 F6X3S4 739 aa27.62■■■□□ 2.01
SMARCC2-210ENST00000550519 UBE2Q2LH0YL09 131 aa27.62■■■□□ 2.01
SMARCC2-210ENST00000550519 KCNJ4P48050 445 aa27.62■■■□□ 2.01
SMARCC2-210ENST00000550519 GTF2IP78347 998 aa27.62■■■□□ 2.01
SMARCC2-210ENST00000550519 CD209Q9NNX6 404 aa27.62■■■□□ 2.01
SMARCC2-210ENST00000550519 SPINK5Q9NQ38 1064 aaPredicted RBP27.62■■■□□ 2.01
SMARCC2-210ENST00000550519 CACNA1FO60840 1977 aa27.62■■■□□ 2.01
SMARCC2-210ENST00000550519 SASH1O94885 1247 aa27.61■■■□□ 2.01
SMARCC2-210ENST00000550519 MLLT1Q03111 559 aaPredicted RBP27.61■■■□□ 2.01
SMARCC2-210ENST00000550519 C15orf52Q6ZUT6 534 aaKnown RBP27.61■■■□□ 2.01
SMARCC2-210ENST00000550519 KIAA0825Q8IV33 1275 aa27.61■■■□□ 2.01
SMARCC2-210ENST00000550519 ZBED3Q96IU2 234 aaPredicted RBP27.61■■■□□ 2.01
SMARCC2-210ENST00000550519 HDAC9Q9UKV0 1011 aa27.61■■■□□ 2.01
SMARCC2-210ENST00000550519 SNAP23O00161 211 aa27.6■■■□□ 2.01
SMARCC2-210ENST00000550519 IFIT5Q13325 482 aaKnown RBP27.6■■■□□ 2.01
SMARCC2-210ENST00000550519 TAF5LO75529 589 aa27.59■■■□□ 2.01
SMARCC2-210ENST00000550519 NF2P35240 595 aa27.58■■■□□ 2.01
SMARCC2-210ENST00000550519 HELBQ8NG08 1087 aaPredicted RBP27.58■■■□□ 2.01
SMARCC2-210ENST00000550519 APOBEC3FQ8IUX4 373 aaKnown RBP27.57■■■□□ 2
SMARCC2-210ENST00000550519 AKAP11Q9UKA4 1901 aa27.57■■■□□ 2
SMARCC2-210ENST00000550519 TTLL12Q14166 644 aaPredicted RBP27.56■■■□□ 2
SMARCC2-210ENST00000550519 EPHA10Q5JZY3 1008 aa27.56■■■□□ 2
SMARCC2-210ENST00000550519 LMBR1LQ6UX01 489 aa27.56■■■□□ 2
SMARCC2-210ENST00000550519 CERS5Q8N5B7 392 aa27.56■■■□□ 2
SMARCC2-210ENST00000550519 CHMP3Q9Y3E7 222 aa27.56■■■□□ 2
SMARCC2-210ENST00000550519 GRM8O00222 908 aa27.55■■■□□ 2
SMARCC2-210ENST00000550519 IL1R1P14778 569 aa27.54■■■□□ 2
SMARCC2-210ENST00000550519 MTMR14Q8NCE2 650 aa27.54■■■□□ 2
SMARCC2-210ENST00000550519 TM4SF4P48230 202 aa27.53■■■□□ 2
SMARCC2-210ENST00000550519 ZNF316A6NFI3 1004 aaPredicted RBP27.52■■■□□ 2
SMARCC2-210ENST00000550519 PTPN12Q05209 780 aaKnown RBP27.52■■■□□ 2
SMARCC2-210ENST00000550519 DLGAP5Q15398 846 aa27.52■■■□□ 2
SMARCC2-210ENST00000550519 CCDC57Q2TAC2 916 aa27.52■■■□□ 2
SMARCC2-210ENST00000550519 ARMC9Q7Z3E5 817 aa27.52■■■□□ 2
SMARCC2-210ENST00000550519 ZNF804AQ7Z570 1209 aa27.52■■■□□ 2
SMARCC2-210ENST00000550519 CTU1Q7Z7A3 348 aaKnown RBP27.52■■■□□ 2
SMARCC2-210ENST00000550519 ALDH1L1O75891 902 aa27.51■■□□□ 1.99
SMARCC2-210ENST00000550519 ZEB1P37275 1124 aaPredicted RBP27.51■■□□□ 1.99
SMARCC2-210ENST00000550519 FKBP1AP62942 108 aaKnown RBP27.51■■□□□ 1.99
SMARCC2-210ENST00000550519 LDLRAD1Q5T700 205 aa27.51■■□□□ 1.99
SMARCC2-210ENST00000550519 LDHAL6AQ6ZMR3 332 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms