RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 PRPF40BQ6NWY9 871 aaKnown RBP8.55□□□□□ -1.04
HCFC2-204ENST00000550335 ZNF296Q8WUU4 475 aaPredicted RBP8.55□□□□□ -1.04
HCFC2-204ENST00000550335 GTPBP3Q969Y2 492 aaKnown RBP8.55□□□□□ -1.04
HCFC2-204ENST00000550335 ARMC5Q96C12 935 aa8.55□□□□□ -1.04
HCFC2-204ENST00000550335 HHIPQ96QV1 700 aa8.55□□□□□ -1.04
HCFC2-204ENST00000550335 ATP13A2Q9NQ11 1180 aa8.55□□□□□ -1.04
HCFC2-204ENST00000550335 EFR3BQ9Y2G0 817 aa8.55□□□□□ -1.04
HCFC2-204ENST00000550335 SLC35F4A4IF30 521 aa8.54□□□□□ -1.04
HCFC2-204ENST00000550335 CELA3AP09093 270 aa8.54□□□□□ -1.04
HCFC2-204ENST00000550335 NASPP49321 788 aaPredicted RBP8.54□□□□□ -1.04
HCFC2-204ENST00000550335 SMCPP49901 116 aaPredicted RBP8.54□□□□□ -1.04
HCFC2-204ENST00000550335 SNAP47Q5SQN1 464 aa8.54□□□□□ -1.04
HCFC2-204ENST00000550335 SOGA3Q5TF21 947 aa8.54□□□□□ -1.04
HCFC2-204ENST00000550335 SV2BQ7L1I2 683 aa8.54□□□□□ -1.04
HCFC2-204ENST00000550335 CCNJLQ8IV13 435 aa8.54□□□□□ -1.04
HCFC2-204ENST00000550335 CCDC155Q8N6L0 562 aa8.54□□□□□ -1.04
HCFC2-204ENST00000550335 CNTNAP3BQ96NU0 1288 aa8.54□□□□□ -1.04
HCFC2-204ENST00000550335 CNTNAP3Q9BZ76 1288 aa8.54□□□□□ -1.04
HCFC2-204ENST00000550335 GPN3Q9UHW5 284 aaPredicted RBP8.54□□□□□ -1.04
HCFC2-204ENST00000550335 PRR12Q9ULL5 1215 aa8.54□□□□□ -1.04
HCFC2-204ENST00000550335 MRVI1Q9Y6F6 885 aa8.54□□□□□ -1.04
HCFC2-204ENST00000550335 LOC102724428A0A0B4J2F2 783 aa8.53□□□□□ -1.04
HCFC2-204ENST00000550335 PF4P02776 101 aa8.53□□□□□ -1.04
HCFC2-204ENST00000550335 FGRP09769 529 aa8.53□□□□□ -1.04
HCFC2-204ENST00000550335 RLBP1P12271 317 aa8.53□□□□□ -1.04
HCFC2-204ENST00000550335 LMNB1P20700 586 aa8.53□□□□□ -1.04
HCFC2-204ENST00000550335 SIK1P57059 783 aa8.53□□□□□ -1.04
HCFC2-204ENST00000550335 RBL2Q08999 1139 aa8.53□□□□□ -1.04
HCFC2-204ENST00000550335 CEP120Q8N960 986 aa8.53□□□□□ -1.04
HCFC2-204ENST00000550335 CPLX3Q8WVH0 158 aa8.53□□□□□ -1.04
HCFC2-204ENST00000550335 CEP44Q9C0F1 390 aa8.53□□□□□ -1.04
HCFC2-204ENST00000550335 ZFYVE1Q9HBF4 777 aa8.53□□□□□ -1.04
HCFC2-204ENST00000550335 DZANK1Q9NVP4 752 aa8.53□□□□□ -1.04
HCFC2-204ENST00000550335 PPM1HQ9ULR3 514 aa8.53□□□□□ -1.04
HCFC2-204ENST00000550335 A0A096LPE4 126 aa8.52□□□□□ -1.05
HCFC2-204ENST00000550335 A0A1W2PPZ6 126 aa8.52□□□□□ -1.05
HCFC2-204ENST00000550335 KIF4AO95239 1232 aa8.52□□□□□ -1.05
HCFC2-204ENST00000550335 GHRHP01286 108 aa8.52□□□□□ -1.05
HCFC2-204ENST00000550335 CANXP27824 592 aaKnown RBP8.52□□□□□ -1.05
HCFC2-204ENST00000550335 LIG3P49916 1009 aa8.52□□□□□ -1.05
HCFC2-204ENST00000550335 MAP3K10Q02779 954 aa8.52□□□□□ -1.05
HCFC2-204ENST00000550335 BMS1Q14692 1282 aaKnown RBP8.52□□□□□ -1.05
HCFC2-204ENST00000550335 NOP9Q86U38 636 aaKnown RBP8.52□□□□□ -1.05
HCFC2-204ENST00000550335 CKAP2LQ8IYA6 745 aa8.52□□□□□ -1.05
HCFC2-204ENST00000550335 TRIM22Q8IYM9 498 aa8.52□□□□□ -1.05
HCFC2-204ENST00000550335 EAF1Q96JC9 268 aaPredicted RBP8.52□□□□□ -1.05
HCFC2-204ENST00000550335 RASSF4Q9H2L5 321 aa8.52□□□□□ -1.05
HCFC2-204ENST00000550335 GINM1Q9NU53 330 aa8.52□□□□□ -1.05
HCFC2-204ENST00000550335 DACH1Q9UI36 760 aa8.52□□□□□ -1.05
HCFC2-204ENST00000550335 PDE2AO00408 941 aaPredicted RBP8.51□□□□□ -1.05
HCFC2-204ENST00000550335 MAP3K6O95382 1288 aa8.51□□□□□ -1.05
HCFC2-204ENST00000550335 SOX18P35713 384 aa8.51□□□□□ -1.05
HCFC2-204ENST00000550335 ATP11AP98196 1134 aa8.51□□□□□ -1.05
HCFC2-204ENST00000550335 UBAP2LQ14157 1087 aaKnown RBP8.51□□□□□ -1.05
HCFC2-204ENST00000550335 TTBK2Q6IQ55 1244 aa8.51□□□□□ -1.05
HCFC2-204ENST00000550335 FBXL19Q6PCT2 694 aa8.51□□□□□ -1.05
HCFC2-204ENST00000550335 MICALL1Q8N3F8 863 aa8.51□□□□□ -1.05
HCFC2-204ENST00000550335 GOLM1Q8NBJ4 401 aa8.51□□□□□ -1.05
HCFC2-204ENST00000550335 UBE2OQ9C0C9 1292 aaKnown RBP8.51□□□□□ -1.05
HCFC2-204ENST00000550335 PIF1Q9H611 641 aa8.51□□□□□ -1.05
HCFC2-204ENST00000550335 HCN2Q9UL51 889 aa8.51□□□□□ -1.05
HCFC2-204ENST00000550335 TMA7Q9Y2S6 64 aaKnown RBP8.51□□□□□ -1.05
HCFC2-204ENST00000550335 CDC14CA4D256 554 aa8.5□□□□□ -1.05
HCFC2-204ENST00000550335 POTECB2RU33 542 aa8.5□□□□□ -1.05
HCFC2-204ENST00000550335 GPR25O00155 361 aa8.5□□□□□ -1.05
HCFC2-204ENST00000550335 FGFR3P22607 806 aa8.5□□□□□ -1.05
HCFC2-204ENST00000550335 PHC3Q8NDX5 983 aa8.5□□□□□ -1.05
HCFC2-204ENST00000550335 RASGRP4Q8TDF6 673 aa8.5□□□□□ -1.05
HCFC2-204ENST00000550335 JARID2Q92833 1246 aaPredicted RBP8.5□□□□□ -1.05
HCFC2-204ENST00000550335 NXPE3Q969Y0 559 aa8.5□□□□□ -1.05
HCFC2-204ENST00000550335 SEC16BQ96JE7 1060 aa8.5□□□□□ -1.05
HCFC2-204ENST00000550335 RBSNQ9H1K0 784 aa8.5□□□□□ -1.05
HCFC2-204ENST00000550335 OSBPL2Q9H1P3 480 aa8.5□□□□□ -1.05
HCFC2-204ENST00000550335 SEC31BQ9NQW1 1179 aa8.5□□□□□ -1.05
HCFC2-204ENST00000550335 UBP1Q9NZI7 540 aa8.5□□□□□ -1.05
HCFC2-204ENST00000550335 PHF24Q9UPV7 400 aa8.5□□□□□ -1.05
HCFC2-204ENST00000550335 SUPT16HQ9Y5B9 1047 aaKnown RBP8.5□□□□□ -1.05
HCFC2-204ENST00000550335 CADPSQ9ULU8 1353 aa8.49□□□□□ -1.05
HCFC2-204ENST00000550335 ZBTB42B2RXF5 422 aa8.49□□□□□ -1.05
HCFC2-204ENST00000550335 PPM1GO15355 546 aaPredicted RBP8.49□□□□□ -1.05
HCFC2-204ENST00000550335 TLR3O15455 904 aaKnown RBP8.49□□□□□ -1.05
HCFC2-204ENST00000550335 EIF2AK2P19525 551 aaKnown RBP8.49□□□□□ -1.05
HCFC2-204ENST00000550335 NRLP54845 237 aa8.49□□□□□ -1.05
HCFC2-204ENST00000550335 CTBSQ01459 385 aa8.49□□□□□ -1.05
HCFC2-204ENST00000550335 NFX1Q12986 1120 aaKnown RBP8.49□□□□□ -1.05
HCFC2-204ENST00000550335 CAMK2GQ13555 558 aaPredicted RBP8.49□□□□□ -1.05
HCFC2-204ENST00000550335 CEP135Q66GS9 1140 aa8.49□□□□□ -1.05
HCFC2-204ENST00000550335 FOXR1Q6PIV2 292 aa8.49□□□□□ -1.05
HCFC2-204ENST00000550335 NKD1Q969G9 470 aa8.49□□□□□ -1.05
HCFC2-204ENST00000550335 ZNF837Q96EG3 531 aaPredicted RBP8.49□□□□□ -1.05
HCFC2-204ENST00000550335 EFCC1Q9HA90 598 aa8.49□□□□□ -1.05
HCFC2-204ENST00000550335 AAASQ9NRG9 546 aa8.49□□□□□ -1.05
HCFC2-204ENST00000550335 NDFIP2Q9NV92 336 aa8.49□□□□□ -1.05
HCFC2-204ENST00000550335 ATXN7L1Q9ULK2 861 aaPredicted RBP8.49□□□□□ -1.05
HCFC2-204ENST00000550335 CPB1P15086 417 aa8.48□□□□□ -1.05
HCFC2-204ENST00000550335 APOBRQ0VD83 1088 aa8.48□□□□□ -1.05
HCFC2-204ENST00000550335 TMEM102Q8N9M5 508 aaPredicted RBP8.48□□□□□ -1.05
HCFC2-204ENST00000550335 ANAPC16Q96DE5 110 aa8.48□□□□□ -1.05
HCFC2-204ENST00000550335 NECAB3Q96P71 396 aaPredicted RBP8.48□□□□□ -1.05
HCFC2-204ENST00000550335 TRERF1Q96PN7 1200 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms