RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 FRAT1Q92837 279 aaPredicted RBP22.57■■□□□ 1.2
TUBA1A-206ENST00000550254 COA1Q9GZY4 146 aa22.57■■□□□ 1.2
TUBA1A-206ENST00000550254 RIPOR2Q9Y4F9 1068 aa22.57■■□□□ 1.2
TUBA1A-206ENST00000550254 H7C1D1 291 aa22.56■■□□□ 1.2
TUBA1A-206ENST00000550254 IPO8O15397 1037 aaKnown RBP22.56■■□□□ 1.2
TUBA1A-206ENST00000550254 PLIN1O60240 522 aa22.56■■□□□ 1.2
TUBA1A-206ENST00000550254 UBTFL1P0CB47 393 aaPredicted RBP22.56■■□□□ 1.2
TUBA1A-206ENST00000550254 KCNJ4P48050 445 aa22.56■■□□□ 1.2
TUBA1A-206ENST00000550254 RSBN1LQ6PCB5 846 aaPredicted RBP22.56■■□□□ 1.2
TUBA1A-206ENST00000550254 ZNF609O15014 1411 aa22.56■■□□□ 1.2
TUBA1A-206ENST00000550254 USP17L3A6NCW0 530 aa22.55■■□□□ 1.2
TUBA1A-206ENST00000550254 USP17L4A6NCW7 530 aa22.55■■□□□ 1.2
TUBA1A-206ENST00000550254 RFX5P48382 616 aaPredicted RBP22.55■■□□□ 1.2
TUBA1A-206ENST00000550254 LRRC24Q50LG9 513 aa22.55■■□□□ 1.2
TUBA1A-206ENST00000550254 C15orf52Q6ZUT6 534 aaKnown RBP22.55■■□□□ 1.2
TUBA1A-206ENST00000550254 USP17L1Q7RTZ2 530 aa22.55■■□□□ 1.2
TUBA1A-206ENST00000550254 KLHDC4Q8TBB5 520 aa22.55■■□□□ 1.2
TUBA1A-206ENST00000550254 MEIS3Q99687 375 aa22.55■■□□□ 1.2
TUBA1A-206ENST00000550254 PGAP2Q9UHJ9 254 aa22.55■■□□□ 1.2
TUBA1A-206ENST00000550254 EGFRP00533 1210 aa22.54■■□□□ 1.2
TUBA1A-206ENST00000550254 SAMD7Q7Z3H4 446 aa22.54■■□□□ 1.2
TUBA1A-206ENST00000550254 GMLQ99445 158 aa22.54■■□□□ 1.2
TUBA1A-206ENST00000550254 AGBL3Q8NEM8 1001 aa22.53■■□□□ 1.2
TUBA1A-206ENST00000550254 FMR1Q06787 632 aaKnown RBP eCLIP22.52■■□□□ 1.2
TUBA1A-206ENST00000550254 TBC1D10BQ4KMP7 808 aaPredicted RBP22.52■■□□□ 1.2
TUBA1A-206ENST00000550254 DACT2Q5SW24 774 aa22.52■■□□□ 1.2
TUBA1A-206ENST00000550254 ZKSCAN2Q63HK3 967 aa22.52■■□□□ 1.2
TUBA1A-206ENST00000550254 CLUAP1Q96AJ1 413 aa22.52■■□□□ 1.2
TUBA1A-206ENST00000550254 MXD3Q9BW11 206 aa22.52■■□□□ 1.2
TUBA1A-206ENST00000550254 CD209Q9NNX6 404 aa22.52■■□□□ 1.2
TUBA1A-206ENST00000550254 LRRFIP2Q9Y608 721 aaKnown RBP22.52■■□□□ 1.2
TUBA1A-206ENST00000550254 MROH5Q6ZUA9 1318 aa22.52■■□□□ 1.2
TUBA1A-206ENST00000550254 PTPN12Q05209 780 aaKnown RBP22.51■■□□□ 1.19
TUBA1A-206ENST00000550254 STRIP1Q5VSL9 837 aa22.51■■□□□ 1.19
TUBA1A-206ENST00000550254 ZC3H15Q8WU90 426 aaKnown RBP22.51■■□□□ 1.19
TUBA1A-206ENST00000550254 CREBZFQ9NS37 354 aa22.51■■□□□ 1.19
TUBA1A-206ENST00000550254 ZNF280AP59817 542 aaPredicted RBP22.5■■□□□ 1.19
TUBA1A-206ENST00000550254 UBE4AQ14139 1066 aa22.5■■□□□ 1.19
TUBA1A-206ENST00000550254 RBM26Q5T8P6 1007 aaKnown RBP22.5■■□□□ 1.19
TUBA1A-206ENST00000550254 KLRG1Q96E93 195 aa22.5■■□□□ 1.19
TUBA1A-206ENST00000550254 TTLL5Q6EMB2 1281 aa22.49■■□□□ 1.19
TUBA1A-206ENST00000550254 VGLL2Q8N8G2 317 aa22.49■■□□□ 1.19
TUBA1A-206ENST00000550254 FBXW7Q969H0 707 aa22.49■■□□□ 1.19
TUBA1A-206ENST00000550254 TRPM7Q96QT4 1865 aa22.48■■□□□ 1.19
TUBA1A-206ENST00000550254 TRAF5O00463 557 aa22.48■■□□□ 1.19
TUBA1A-206ENST00000550254 IL1R1P14778 569 aa22.48■■□□□ 1.19
TUBA1A-206ENST00000550254 GTF2IP78347 998 aa22.48■■□□□ 1.19
TUBA1A-206ENST00000550254 TMEM57Q8N5G2 664 aa22.48■■□□□ 1.19
TUBA1A-206ENST00000550254 HDAC5Q9UQL6 1122 aa22.48■■□□□ 1.19
TUBA1A-206ENST00000550254 POLR2AP24928 1970 aaKnown RBP22.47■■□□□ 1.19
TUBA1A-206ENST00000550254 TMEM88BA6NKF7 163 aa22.47■■□□□ 1.19
TUBA1A-206ENST00000550254 EYA2O00167 538 aa22.47■■□□□ 1.19
TUBA1A-206ENST00000550254 GNAI3P08754 354 aa22.47■■□□□ 1.19
TUBA1A-206ENST00000550254 USP17L8P0C7I0 530 aa22.47■■□□□ 1.19
TUBA1A-206ENST00000550254 KIF4BQ2VIQ3 1234 aa22.47■■□□□ 1.19
TUBA1A-206ENST00000550254 METTL24Q5JXM2 366 aa22.47■■□□□ 1.19
TUBA1A-206ENST00000550254 ZNF804AQ7Z570 1209 aa22.47■■□□□ 1.19
TUBA1A-206ENST00000550254 GLIS2Q9BZE0 524 aaPredicted RBP22.47■■□□□ 1.19
TUBA1A-206ENST00000550254 PDE8BO95263 885 aa22.46■■□□□ 1.19
TUBA1A-206ENST00000550254 ATG9AQ7Z3C6 839 aa22.46■■□□□ 1.19
TUBA1A-206ENST00000550254 FAM84BQ96KN1 310 aaPredicted RBP22.46■■□□□ 1.19
TUBA1A-206ENST00000550254 MYO3BQ8WXR4 1341 aa22.46■■□□□ 1.19
TUBA1A-206ENST00000550254 GYG1P46976 350 aa22.45■■□□□ 1.18
TUBA1A-206ENST00000550254 MYOZ2Q9NPC6 264 aa22.45■■□□□ 1.18
TUBA1A-206ENST00000550254 ASTN2O75129 1339 aaPredicted RBP22.44■■□□□ 1.18
TUBA1A-206ENST00000550254 CST9Q5W186 159 aa22.44■■□□□ 1.18
TUBA1A-206ENST00000550254 CDC37L1Q7L3B6 337 aa22.44■■□□□ 1.18
TUBA1A-206ENST00000550254 RLBP1P12271 317 aa22.43■■□□□ 1.18
TUBA1A-206ENST00000550254 FGFR2P21802 821 aa22.43■■□□□ 1.18
TUBA1A-206ENST00000550254 HIBADHP31937 336 aaKnown RBP22.43■■□□□ 1.18
TUBA1A-206ENST00000550254 CERS5Q8N5B7 392 aa22.43■■□□□ 1.18
TUBA1A-206ENST00000550254 TDRD7Q8NHU6 1098 aaKnown RBP22.43■■□□□ 1.18
TUBA1A-206ENST00000550254 SIL1Q9H173 461 aa22.43■■□□□ 1.18
TUBA1A-206ENST00000550254 FBXO3Q9UK99 471 aa22.43■■□□□ 1.18
TUBA1A-206ENST00000550254 PA2G4Q9UQ80 394 aaKnown RBP22.43■■□□□ 1.18
TUBA1A-206ENST00000550254 MTX1Q13505 466 aa22.42■■□□□ 1.18
TUBA1A-206ENST00000550254 SCARF1Q14162 830 aa22.42■■□□□ 1.18
TUBA1A-206ENST00000550254 DLK2Q6UY11 383 aa22.42■■□□□ 1.18
TUBA1A-206ENST00000550254 FBXO33Q7Z6M2 555 aa22.42■■□□□ 1.18
TUBA1A-206ENST00000550254 USP48Q86UV5 1035 aa22.42■■□□□ 1.18
TUBA1A-206ENST00000550254 DZIP1LQ8IYY4 767 aaKnown RBP22.42■■□□□ 1.18
TUBA1A-206ENST00000550254 JMYQ8N9B5 988 aa22.42■■□□□ 1.18
TUBA1A-206ENST00000550254 COPRSQ9NQ92 184 aa22.42■■□□□ 1.18
TUBA1A-206ENST00000550254 MKRN1Q9UHC7 482 aaKnown RBP22.42■■□□□ 1.18
TUBA1A-206ENST00000550254 CIAO1O76071 339 aa22.41■■□□□ 1.18
TUBA1A-206ENST00000550254 SASH1O94885 1247 aa22.41■■□□□ 1.18
TUBA1A-206ENST00000550254 GNAI2P04899 355 aa22.41■■□□□ 1.18
TUBA1A-206ENST00000550254 KIAA0825Q8IV33 1275 aa22.41■■□□□ 1.18
TUBA1A-206ENST00000550254 JAG2Q9Y219 1238 aa22.41■■□□□ 1.18
TUBA1A-206ENST00000550254 CNTNAP1P78357 1384 aa22.4■■□□□ 1.18
TUBA1A-206ENST00000550254 FAM205AQ6ZU69 1335 aa22.4■■□□□ 1.18
TUBA1A-206ENST00000550254 FTSJ3Q8IY81 847 aaKnown RBP22.4■■□□□ 1.18
TUBA1A-206ENST00000550254 OGFOD1Q8N543 542 aa22.4■■□□□ 1.18
TUBA1A-206ENST00000550254 DCPSQ96C86 337 aaKnown RBP22.4■■□□□ 1.18
TUBA1A-206ENST00000550254 GGA3Q9NZ52 723 aa22.4■■□□□ 1.18
TUBA1A-206ENST00000550254 SRGAP3O43295 1099 aa22.39■■□□□ 1.17
TUBA1A-206ENST00000550254 FKBP1AP62942 108 aaKnown RBP22.39■■□□□ 1.17
TUBA1A-206ENST00000550254 PUM3Q15397 648 aaKnown RBP22.39■■□□□ 1.17
TUBA1A-206ENST00000550254 NBPF9Q3BBW0 867 aa22.39■■□□□ 1.17
TUBA1A-206ENST00000550254 KRT26Q7Z3Y9 468 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms