RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 KCNJ4P48050 445 aa13.78□□□□□ -0.2
VTI1BP3-201ENST00000550220 CCDC57Q2TAC2 916 aa13.78□□□□□ -0.2
VTI1BP3-201ENST00000550220 C2orf69Q8N8R5 385 aa13.78□□□□□ -0.2
VTI1BP3-201ENST00000550220 SRCIN1Q9C0H9 1055 aa13.78□□□□□ -0.2
VTI1BP3-201ENST00000550220 ZNF408Q9H9D4 720 aa13.78□□□□□ -0.2
VTI1BP3-201ENST00000550220 ZNF521Q96K83 1311 aa13.78□□□□□ -0.2
VTI1BP3-201ENST00000550220 TAF1P21675 1872 aa13.78□□□□□ -0.2
VTI1BP3-201ENST00000550220 CYP4F22Q6NT55 531 aa13.77□□□□□ -0.21
VTI1BP3-201ENST00000550220 GMLQ99445 158 aa13.77□□□□□ -0.21
VTI1BP3-201ENST00000550220 MYOZ2Q9NPC6 264 aa13.77□□□□□ -0.21
VTI1BP3-201ENST00000550220 PITPNM2Q9BZ72 1349 aa13.76□□□□□ -0.21
VTI1BP3-201ENST00000550220 FOXO4P98177 505 aa13.76□□□□□ -0.21
VTI1BP3-201ENST00000550220 CHRNDQ07001 517 aa13.76□□□□□ -0.21
VTI1BP3-201ENST00000550220 NOGQ13253 232 aa13.76□□□□□ -0.21
VTI1BP3-201ENST00000550220 GRM1Q13255 1194 aa13.76□□□□□ -0.21
VTI1BP3-201ENST00000550220 SCARF1Q14162 830 aa13.76□□□□□ -0.21
VTI1BP3-201ENST00000550220 TAF7LQ5H9L4 462 aa13.76□□□□□ -0.21
VTI1BP3-201ENST00000550220 SLC4A10Q6U841 1118 aa13.76□□□□□ -0.21
VTI1BP3-201ENST00000550220 C15orf52Q6ZUT6 534 aaKnown RBP13.76□□□□□ -0.21
VTI1BP3-201ENST00000550220 CCDC102AQ96A19 550 aa13.76□□□□□ -0.21
VTI1BP3-201ENST00000550220 GBA2Q9HCG7 927 aaPredicted RBP13.76□□□□□ -0.21
VTI1BP3-201ENST00000550220 CHMP3Q9Y3E7 222 aa13.76□□□□□ -0.21
VTI1BP3-201ENST00000550220 PTPRCP08575 1304 aa13.75□□□□□ -0.21
VTI1BP3-201ENST00000550220 CACNA1FO60840 1977 aa13.75□□□□□ -0.21
VTI1BP3-201ENST00000550220 EGFRP00533 1210 aa13.75□□□□□ -0.21
VTI1BP3-201ENST00000550220 HUNKP57058 714 aa13.75□□□□□ -0.21
VTI1BP3-201ENST00000550220 FKBP1BP68106 108 aa13.75□□□□□ -0.21
VTI1BP3-201ENST00000550220 DACT2Q5SW24 774 aa13.75□□□□□ -0.21
VTI1BP3-201ENST00000550220 TTLL5Q6EMB2 1281 aa13.75□□□□□ -0.21
VTI1BP3-201ENST00000550220 LMBR1LQ6UX01 489 aa13.75□□□□□ -0.21
VTI1BP3-201ENST00000550220 GGA3Q9NZ52 723 aa13.75□□□□□ -0.21
VTI1BP3-201ENST00000550220 HDAC9Q9UKV0 1011 aa13.75□□□□□ -0.21
VTI1BP3-201ENST00000550220 COL4A1P02462 1669 aa13.75□□□□□ -0.21
VTI1BP3-201ENST00000550220 LBX1P52954 281 aa13.74□□□□□ -0.21
VTI1BP3-201ENST00000550220 BRPF1P55201 1214 aaPredicted RBP13.74□□□□□ -0.21
VTI1BP3-201ENST00000550220 ANGEL2Q5VTE6 544 aaKnown RBP13.74□□□□□ -0.21
VTI1BP3-201ENST00000550220 LDHAL6AQ6ZMR3 332 aa13.74□□□□□ -0.21
VTI1BP3-201ENST00000550220 WTIPA6NIX2 430 aaPredicted RBP13.73□□□□□ -0.21
VTI1BP3-201ENST00000550220 CCER2I3L3R5 266 aa13.73□□□□□ -0.21
VTI1BP3-201ENST00000550220 CT47B1P0C2W7 299 aaPredicted RBP13.73□□□□□ -0.21
VTI1BP3-201ENST00000550220 RGMBQ6NW40 437 aa13.73□□□□□ -0.21
VTI1BP3-201ENST00000550220 ZNF804AQ7Z570 1209 aa13.73□□□□□ -0.21
VTI1BP3-201ENST00000550220 REM2Q8IYK8 340 aaPredicted RBP13.73□□□□□ -0.21
VTI1BP3-201ENST00000550220 MRPL50Q8N5N7 158 aaKnown RBP13.73□□□□□ -0.21
VTI1BP3-201ENST00000550220 FBXW7Q969H0 707 aa13.73□□□□□ -0.21
VTI1BP3-201ENST00000550220 CD209Q9NNX6 404 aa13.73□□□□□ -0.21
VTI1BP3-201ENST00000550220 CNNM1Q9NRU3 951 aa13.73□□□□□ -0.21
VTI1BP3-201ENST00000550220 UTYO14607 1347 aa13.72□□□□□ -0.21
VTI1BP3-201ENST00000550220 ADM5C9JUS6 153 aa13.72□□□□□ -0.21
VTI1BP3-201ENST00000550220 HSPA8P11142 646 aaKnown RBP13.72□□□□□ -0.21
VTI1BP3-201ENST00000550220 SLFN5Q08AF3 891 aa13.72□□□□□ -0.21
VTI1BP3-201ENST00000550220 ALDH1L2Q3SY69 923 aa13.72□□□□□ -0.21
VTI1BP3-201ENST00000550220 TXNRD3Q86VQ6 643 aa13.72□□□□□ -0.21
VTI1BP3-201ENST00000550220 CDCA5Q96FF9 252 aa13.72□□□□□ -0.21
VTI1BP3-201ENST00000550220 NF2P35240 595 aa13.71□□□□□ -0.21
VTI1BP3-201ENST00000550220 ZNF157P51786 506 aaPredicted RBP13.71□□□□□ -0.21
VTI1BP3-201ENST00000550220 FKBP1AP62942 108 aaKnown RBP13.71□□□□□ -0.21
VTI1BP3-201ENST00000550220 GTF2IP78347 998 aa13.71□□□□□ -0.21
VTI1BP3-201ENST00000550220 TRPM7Q96QT4 1865 aa13.7□□□□□ -0.22
VTI1BP3-201ENST00000550220 WNT10BO00744 389 aa13.7□□□□□ -0.22
VTI1BP3-201ENST00000550220 AOC2O75106 756 aa13.7□□□□□ -0.22
VTI1BP3-201ENST00000550220 TAF5LO75529 589 aa13.7□□□□□ -0.22
VTI1BP3-201ENST00000550220 IL1R1P14778 569 aa13.7□□□□□ -0.22
VTI1BP3-201ENST00000550220 UBE4AQ14139 1066 aa13.7□□□□□ -0.22
VTI1BP3-201ENST00000550220 EPHA10Q5JZY3 1008 aa13.7□□□□□ -0.22
VTI1BP3-201ENST00000550220 MROH5Q6ZUA9 1318 aa13.69□□□□□ -0.22
VTI1BP3-201ENST00000550220 SASH1O94885 1247 aa13.69□□□□□ -0.22
VTI1BP3-201ENST00000550220 NBPF7P0C2Y1 421 aaPredicted RBP13.69□□□□□ -0.22
VTI1BP3-201ENST00000550220 NBPF9Q3BBW0 867 aa13.69□□□□□ -0.22
VTI1BP3-201ENST00000550220 RABL6Q3YEC7 729 aaPredicted RBP13.69□□□□□ -0.22
VTI1BP3-201ENST00000550220 APOBEC3FQ8IUX4 373 aaKnown RBP13.69□□□□□ -0.22
VTI1BP3-201ENST00000550220 KIAA0825Q8IV33 1275 aa13.69□□□□□ -0.22
VTI1BP3-201ENST00000550220 HELBQ8NG08 1087 aaPredicted RBP13.69□□□□□ -0.22
VTI1BP3-201ENST00000550220 SSH1Q8WYL5 1049 aa13.69□□□□□ -0.22
VTI1BP3-201ENST00000550220 HDAC5Q9UQL6 1122 aa13.69□□□□□ -0.22
VTI1BP3-201ENST00000550220 MYH3P11055 1940 aa13.68□□□□□ -0.22
VTI1BP3-201ENST00000550220 ASTN2O75129 1339 aaPredicted RBP13.68□□□□□ -0.22
VTI1BP3-201ENST00000550220 MYO1BO43795 1136 aa13.68□□□□□ -0.22
VTI1BP3-201ENST00000550220 PLIN1O60240 522 aa13.68□□□□□ -0.22
VTI1BP3-201ENST00000550220 KLRK1P26718 216 aa13.68□□□□□ -0.22
VTI1BP3-201ENST00000550220 DLGAP5Q15398 846 aa13.68□□□□□ -0.22
VTI1BP3-201ENST00000550220 DLK2Q6UY11 383 aa13.68□□□□□ -0.22
VTI1BP3-201ENST00000550220 MTMR14Q8NCE2 650 aa13.68□□□□□ -0.22
VTI1BP3-201ENST00000550220 SUCLG2Q96I99 432 aa13.68□□□□□ -0.22
VTI1BP3-201ENST00000550220 ZNF594Q96JF6 807 aaPredicted RBP13.68□□□□□ -0.22
VTI1BP3-201ENST00000550220 MXD3Q9BW11 206 aa13.68□□□□□ -0.22
VTI1BP3-201ENST00000550220 IRS2Q9Y4H2 1338 aa13.67□□□□□ -0.22
VTI1BP3-201ENST00000550220 SCN9AQ15858 1988 aa13.67□□□□□ -0.22
VTI1BP3-201ENST00000550220 FAM155AB1AL88 458 aaPredicted RBP13.67□□□□□ -0.22
VTI1BP3-201ENST00000550220 CAPN15O75808 1086 aa13.67□□□□□ -0.22
VTI1BP3-201ENST00000550220 TRMT2AQ8IZ69 625 aaKnown RBP13.67□□□□□ -0.22
VTI1BP3-201ENST00000550220 SAGE1Q9NXZ1 904 aa13.67□□□□□ -0.22
VTI1BP3-201ENST00000550220 SLC10A3P09131 477 aa13.66□□□□□ -0.22
VTI1BP3-201ENST00000550220 HIBADHP31937 336 aaKnown RBP13.66□□□□□ -0.22
VTI1BP3-201ENST00000550220 KAZALD1Q96I82 304 aa13.66□□□□□ -0.22
VTI1BP3-201ENST00000550220 ZBED3Q96IU2 234 aaPredicted RBP13.66□□□□□ -0.22
VTI1BP3-201ENST00000550220 BICC1Q9H694 974 aaKnown RBP13.66□□□□□ -0.22
VTI1BP3-201ENST00000550220 SMC4Q9NTJ3 1288 aa13.66□□□□□ -0.22
VTI1BP3-201ENST00000550220 RIPOR2Q9Y4F9 1068 aa13.66□□□□□ -0.22
VTI1BP3-201ENST00000550220 PPP2R3BQ9Y5P8 575 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms