RNA–Protein interactions for RNA: ENST00000549917.1

PPFIA2-217, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-217ENST00000549917 GDF6Q6KF10 455 aaPredicted RBP9.26□□□□□ -0.93
PPFIA2-217ENST00000549917 DMRTC2Q8IXT2 367 aaPredicted RBP9.26□□□□□ -0.93
PPFIA2-217ENST00000549917 CCDC74AQ96AQ1 378 aa9.26□□□□□ -0.93
PPFIA2-217ENST00000549917 NPHS2Q9NP85 383 aa9.26□□□□□ -0.93
PPFIA2-217ENST00000549917 PNMA6FA0A0J9YX94 578 aa9.25□□□□□ -0.93
PPFIA2-217ENST00000549917 ANKRD33BA6NCL7 494 aa9.25□□□□□ -0.93
PPFIA2-217ENST00000549917 NEFLP07196 543 aa9.25□□□□□ -0.93
PPFIA2-217ENST00000549917 PI16Q6UXB8 463 aa9.25□□□□□ -0.93
PPFIA2-217ENST00000549917 NPAS4Q8IUM7 802 aa9.25□□□□□ -0.93
PPFIA2-217ENST00000549917 NXPE3Q969Y0 559 aa9.25□□□□□ -0.93
PPFIA2-217ENST00000549917 LACRTQ9GZZ8 138 aa9.25□□□□□ -0.93
PPFIA2-217ENST00000549917 FAM229AH3BQW9 127 aa9.24□□□□□ -0.93
PPFIA2-217ENST00000549917 SMNDC1O75940 238 aaKnown RBP eCLIP9.24□□□□□ -0.93
PPFIA2-217ENST00000549917 RASSF7Q02833 373 aa9.24□□□□□ -0.93
PPFIA2-217ENST00000549917 CCDC27Q2M243 656 aa9.24□□□□□ -0.93
PPFIA2-217ENST00000549917 TMEM102Q8N9M5 508 aaPredicted RBP9.24□□□□□ -0.93
PPFIA2-217ENST00000549917 EPS8L3Q8TE67 593 aaKnown RBP9.24□□□□□ -0.93
PPFIA2-217ENST00000549917 TCF12Q99081 682 aa9.24□□□□□ -0.93
PPFIA2-217ENST00000549917 WWC3Q9ULE0 1092 aa9.24□□□□□ -0.93
PPFIA2-217ENST00000549917 A0A0A0MRY4 1105 aa9.23□□□□□ -0.93
PPFIA2-217ENST00000549917 METTL12A8MUP2 240 aa9.23□□□□□ -0.93
PPFIA2-217ENST00000549917 RNF225M0QZC1 329 aaPredicted RBP9.23□□□□□ -0.93
PPFIA2-217ENST00000549917 PDE2AO00408 941 aaPredicted RBP9.23□□□□□ -0.93
PPFIA2-217ENST00000549917 MAPK8P45983 427 aa9.23□□□□□ -0.93
PPFIA2-217ENST00000549917 KIAA0319Q5VV43 1072 aa9.23□□□□□ -0.93
PPFIA2-217ENST00000549917 IL22RA1Q8N6P7 574 aa9.23□□□□□ -0.93
PPFIA2-217ENST00000549917 BHLHE41Q9C0J9 482 aaPredicted RBP9.23□□□□□ -0.93
PPFIA2-217ENST00000549917 ADAM19Q9H013 955 aa9.23□□□□□ -0.93
PPFIA2-217ENST00000549917 TM4SF5O14894 197 aa9.22□□□□□ -0.93
PPFIA2-217ENST00000549917 DEAF1O75398 565 aaPredicted RBP9.22□□□□□ -0.93
PPFIA2-217ENST00000549917 EPHA1P21709 976 aa9.22□□□□□ -0.93
PPFIA2-217ENST00000549917 TRAPPC3LQ5T215 181 aa9.22□□□□□ -0.93
PPFIA2-217ENST00000549917 WFDC8Q8IUA0 241 aa9.22□□□□□ -0.93
PPFIA2-217ENST00000549917 DCAF5Q96JK2 942 aa9.22□□□□□ -0.93
PPFIA2-217ENST00000549917 SH2B1Q9NRF2 756 aaPredicted RBP9.22□□□□□ -0.93
PPFIA2-217ENST00000549917 KRBA1A5PL33 1030 aa9.21□□□□□ -0.94
PPFIA2-217ENST00000549917 PIK3R2O00459 728 aa9.21□□□□□ -0.94
PPFIA2-217ENST00000549917 CCNJLQ8IV13 435 aa9.21□□□□□ -0.94
PPFIA2-217ENST00000549917 GLIS3Q8NEA6 775 aa9.21□□□□□ -0.94
PPFIA2-217ENST00000549917 NOP53Q9NZM5 478 aaKnown RBP9.21□□□□□ -0.94
PPFIA2-217ENST00000549917 SOX13Q9UN79 622 aa9.21□□□□□ -0.94
PPFIA2-217ENST00000549917 ITGB2P05107 769 aa9.2□□□□□ -0.94
PPFIA2-217ENST00000549917 GRIA4P48058 902 aa9.2□□□□□ -0.94
PPFIA2-217ENST00000549917 FMR1NBQ8N0W7 255 aaPredicted RBP9.2□□□□□ -0.94
PPFIA2-217ENST00000549917 PTPRAP18433 802 aa9.19□□□□□ -0.94
PPFIA2-217ENST00000549917 CDC27P30260 824 aa9.19□□□□□ -0.94
PPFIA2-217ENST00000549917 SETDB1Q15047 1291 aa9.19□□□□□ -0.94
PPFIA2-217ENST00000549917 TXNDC11Q6PKC3 985 aa9.19□□□□□ -0.94
PPFIA2-217ENST00000549917 VN1R5Q7Z5H4 357 aa9.19□□□□□ -0.94
PPFIA2-217ENST00000549917 LIN7BQ9HAP6 207 aa9.19□□□□□ -0.94
PPFIA2-217ENST00000549917 GRM2Q14416 872 aa9.18□□□□□ -0.94
PPFIA2-217ENST00000549917 COL19A1Q14993 1142 aa9.18□□□□□ -0.94
PPFIA2-217ENST00000549917 SPRED3Q2MJR0 410 aa9.18□□□□□ -0.94
PPFIA2-217ENST00000549917 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.18□□□□□ -0.94
PPFIA2-217ENST00000549917 TMCO4Q5TGY1 634 aa9.18□□□□□ -0.94
PPFIA2-217ENST00000549917 FBXO33Q7Z6M2 555 aa9.18□□□□□ -0.94
PPFIA2-217ENST00000549917 MUC3BQ9H195 1237 aa9.18□□□□□ -0.94
PPFIA2-217ENST00000549917 ABCB6Q9NP58 842 aa9.18□□□□□ -0.94
PPFIA2-217ENST00000549917 RNF19AQ9NV58 838 aa9.18□□□□□ -0.94
PPFIA2-217ENST00000549917 PPME1Q9Y570 386 aa9.18□□□□□ -0.94
PPFIA2-217ENST00000549917 LINC01387J3KSC0 135 aa9.17□□□□□ -0.94
PPFIA2-217ENST00000549917 SPATA31C1P0DKV0 1188 aa9.17□□□□□ -0.94
PPFIA2-217ENST00000549917 GRIK4Q16099 956 aa9.17□□□□□ -0.94
PPFIA2-217ENST00000549917 CACTIN-AS1Q8N1I8 211 aa9.17□□□□□ -0.94
PPFIA2-217ENST00000549917 DTWD1Q8N5C7 304 aa9.17□□□□□ -0.94
PPFIA2-217ENST00000549917 GALNT11Q8NCW6 608 aa9.17□□□□□ -0.94
PPFIA2-217ENST00000549917 EHD4Q9H223 541 aa9.17□□□□□ -0.94
PPFIA2-217ENST00000549917 SPDYE3A6NKU9 549 aa9.16□□□□□ -0.94
PPFIA2-217ENST00000549917 GDF11O95390 407 aa9.16□□□□□ -0.94
PPFIA2-217ENST00000549917 LDHBP07195 334 aaKnown RBP9.16□□□□□ -0.94
PPFIA2-217ENST00000549917 CDC25BP30305 580 aa9.16□□□□□ -0.94
PPFIA2-217ENST00000549917 TAGLNQ01995 201 aaKnown RBP9.16□□□□□ -0.94
PPFIA2-217ENST00000549917 TRIM28Q13263 835 aaKnown RBP9.16□□□□□ -0.94
PPFIA2-217ENST00000549917 HGSNATQ68CP4 663 aa9.16□□□□□ -0.94
PPFIA2-217ENST00000549917 PRPF40BQ6NWY9 871 aaKnown RBP9.16□□□□□ -0.94
PPFIA2-217ENST00000549917 FBXO11Q86XK2 927 aa9.16□□□□□ -0.94
PPFIA2-217ENST00000549917 ASAP3Q8TDY4 903 aa9.16□□□□□ -0.94
PPFIA2-217ENST00000549917 FBF1Q8TES7 1133 aa9.16□□□□□ -0.94
PPFIA2-217ENST00000549917 BSNDQ8WZ55 320 aa9.16□□□□□ -0.94
PPFIA2-217ENST00000549917 DLL1O00548 723 aa9.15□□□□□ -0.94
PPFIA2-217ENST00000549917 SELPP16109 830 aa9.15□□□□□ -0.94
PPFIA2-217ENST00000549917 ALYREFQ86V81 257 aaKnown RBP9.15□□□□□ -0.94
PPFIA2-217ENST00000549917 A0A096LPE4 126 aa9.14□□□□□ -0.95
PPFIA2-217ENST00000549917 A0A1W2PPZ6 126 aa9.14□□□□□ -0.95
PPFIA2-217ENST00000549917 H3BRJ5 948 aa9.14□□□□□ -0.95
PPFIA2-217ENST00000549917 GADD45BO75293 160 aaPredicted RBP9.14□□□□□ -0.95
PPFIA2-217ENST00000549917 ELNP15502 786 aa9.14□□□□□ -0.95
PPFIA2-217ENST00000549917 CHRNA4P43681 627 aa9.14□□□□□ -0.95
PPFIA2-217ENST00000549917 MFAP1P55081 439 aaKnown RBP9.14□□□□□ -0.95
PPFIA2-217ENST00000549917 RAC1P63000 192 aa9.14□□□□□ -0.95
PPFIA2-217ENST00000549917 PRRT3Q5FWE3 981 aa9.14□□□□□ -0.95
PPFIA2-217ENST00000549917 SHISA2Q6UWI4 295 aa9.14□□□□□ -0.95
PPFIA2-217ENST00000549917 CARD10Q9BWT7 1032 aa9.14□□□□□ -0.95
PPFIA2-217ENST00000549917 OSBPL7Q9BZF2 842 aa9.14□□□□□ -0.95
PPFIA2-217ENST00000549917 ITPKAP23677 461 aa9.13□□□□□ -0.95
PPFIA2-217ENST00000549917 EAPPQ56P03 285 aaPredicted RBP9.13□□□□□ -0.95
PPFIA2-217ENST00000549917 ALG1LQ6GMV1 187 aa9.13□□□□□ -0.95
PPFIA2-217ENST00000549917 NXPE4Q6UWF7 544 aa9.13□□□□□ -0.95
PPFIA2-217ENST00000549917 TMEM151AQ8N4L1 468 aa9.13□□□□□ -0.95
PPFIA2-217ENST00000549917 BCO2Q9BYV7 579 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms