RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 TAF1P21675 1872 aa29.57■■■□□ 2.32
TGFBR1-207ENST00000549766 SNAP23O00161 211 aa29.56■■■□□ 2.32
TGFBR1-207ENST00000549766 RASEFQ8IZ41 740 aa29.56■■■□□ 2.32
TGFBR1-207ENST00000549766 MINPP1Q9UNW1 487 aa29.56■■■□□ 2.32
TGFBR1-207ENST00000549766 RNF113AO15541 343 aaKnown RBP29.56■■■□□ 2.32
TGFBR1-207ENST00000549766 PI16Q6UXB8 463 aa29.56■■■□□ 2.32
TGFBR1-207ENST00000549766 TFCP2L1Q9NZI6 479 aa29.56■■■□□ 2.32
TGFBR1-207ENST00000549766 SERPINB2P05120 415 aa29.55■■■□□ 2.32
TGFBR1-207ENST00000549766 SEC62Q99442 399 aaKnown RBP29.55■■■□□ 2.32
TGFBR1-207ENST00000549766 RBM8AQ9Y5S9 174 aaKnown RBP29.55■■■□□ 2.32
TGFBR1-207ENST00000549766 UBE4AQ14139 1066 aa29.54■■■□□ 2.32
TGFBR1-207ENST00000549766 LRRFIP1Q32MZ4 808 aaKnown RBP29.54■■■□□ 2.32
TGFBR1-207ENST00000549766 NPHP1O15259 732 aa29.53■■■□□ 2.32
TGFBR1-207ENST00000549766 ZFYP08048 801 aaPredicted RBP29.53■■■□□ 2.32
TGFBR1-207ENST00000549766 NEK4P51957 841 aa29.53■■■□□ 2.32
TGFBR1-207ENST00000549766 SLKQ9H2G2 1235 aaPredicted RBP29.53■■■□□ 2.32
TGFBR1-207ENST00000549766 CYP2E1P05181 493 aaPredicted RBP29.53■■■□□ 2.32
TGFBR1-207ENST00000549766 DDR1Q08345 913 aa29.53■■■□□ 2.32
TGFBR1-207ENST00000549766 UPF1Q92900 1129 aaKnown RBP eCLIP29.53■■■□□ 2.32
TGFBR1-207ENST00000549766 POLRMTO00411 1230 aaKnown RBP29.52■■■□□ 2.32
TGFBR1-207ENST00000549766 TTF1Q15361 905 aaPredicted RBP29.52■■■□□ 2.32
TGFBR1-207ENST00000549766 COL23A1Q86Y22 540 aaPredicted RBP29.52■■■□□ 2.32
TGFBR1-207ENST00000549766 FLAD1Q8NFF5 587 aa29.52■■■□□ 2.32
TGFBR1-207ENST00000549766 DDIT3P35638 169 aa29.51■■■□□ 2.31
TGFBR1-207ENST00000549766 PRPF40BQ6NWY9 871 aaKnown RBP29.51■■■□□ 2.31
TGFBR1-207ENST00000549766 HMG20BQ9P0W2 317 aa29.51■■■□□ 2.31
TGFBR1-207ENST00000549766 SLFNL1Q499Z3 407 aa29.5■■■□□ 2.31
TGFBR1-207ENST00000549766 CRY2Q49AN0 593 aa29.5■■■□□ 2.31
TGFBR1-207ENST00000549766 CREB3L3Q68CJ9 461 aa29.5■■■□□ 2.31
TGFBR1-207ENST00000549766 MCM2P49736 904 aa29.5■■■□□ 2.31
TGFBR1-207ENST00000549766 ST5P78524 1137 aa29.5■■■□□ 2.31
TGFBR1-207ENST00000549766 CCDC129Q6ZRS4 1044 aa29.5■■■□□ 2.31
TGFBR1-207ENST00000549766 SPRYD3Q8NCJ5 442 aa29.5■■■□□ 2.31
TGFBR1-207ENST00000549766 ANP32EQ9BTT0 268 aa29.5■■■□□ 2.31
TGFBR1-207ENST00000549766 ZNF804BA4D1E1 1349 aa29.49■■■□□ 2.31
TGFBR1-207ENST00000549766 MAST3O60307 1309 aa29.49■■■□□ 2.31
TGFBR1-207ENST00000549766 RASGRF1Q13972 1273 aa29.49■■■□□ 2.31
TGFBR1-207ENST00000549766 TM6SF1Q9BZW5 370 aa29.49■■■□□ 2.31
TGFBR1-207ENST00000549766 SLC27A2O14975 620 aa29.48■■■□□ 2.31
TGFBR1-207ENST00000549766 BCAMP50895 628 aa29.48■■■□□ 2.31
TGFBR1-207ENST00000549766 SPATA5Q8NB90 893 aa29.48■■■□□ 2.31
TGFBR1-207ENST00000549766 GRAPQ13588 217 aa29.47■■■□□ 2.31
TGFBR1-207ENST00000549766 TSGA10IPQ3SY00 556 aa29.47■■■□□ 2.31
TGFBR1-207ENST00000549766 NLGN1Q8N2Q7 840 aa29.47■■■□□ 2.31
TGFBR1-207ENST00000549766 GRAPLQ8TC17 118 aaPredicted RBP29.47■■■□□ 2.31
TGFBR1-207ENST00000549766 OSBP2Q969R2 916 aa29.47■■■□□ 2.31
TGFBR1-207ENST00000549766 UPF3BQ9BZI7 483 aaKnown RBP29.47■■■□□ 2.31
TGFBR1-207ENST00000549766 ANKRD2Q9GZV1 360 aa29.47■■■□□ 2.31
TGFBR1-207ENST00000549766 PIH1D3Q9NQM4 214 aaKnown RBP29.47■■■□□ 2.31
TGFBR1-207ENST00000549766 DSCC1Q9BVC3 393 aa29.47■■■□□ 2.31
TGFBR1-207ENST00000549766 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.47■■■□□ 2.31
TGFBR1-207ENST00000549766 KLRG2A4D1S0 409 aaPredicted RBP29.46■■■□□ 2.31
TGFBR1-207ENST00000549766 ZKSCAN1P17029 563 aaPredicted RBP29.46■■■□□ 2.31
TGFBR1-207ENST00000549766 KCNJ4P48050 445 aa29.46■■■□□ 2.31
TGFBR1-207ENST00000549766 RNF20Q5VTR2 975 aa29.46■■■□□ 2.31
TGFBR1-207ENST00000549766 APPBP2Q92624 585 aa29.46■■■□□ 2.31
TGFBR1-207ENST00000549766 U3KPZ7 1027 aaPredicted RBP29.46■■■□□ 2.31
TGFBR1-207ENST00000549766 PNPLA7Q6ZV29 1317 aa29.45■■■□□ 2.31
TGFBR1-207ENST00000549766 ADD2P35612 726 aa29.45■■■□□ 2.31
TGFBR1-207ENST00000549766 ZSCAN25Q6NSZ9 544 aa29.45■■■□□ 2.31
TGFBR1-207ENST00000549766 TTC14Q96N46 770 aa29.45■■■□□ 2.31
TGFBR1-207ENST00000549766 CAMKK2Q96RR4 588 aa29.45■■■□□ 2.31
TGFBR1-207ENST00000549766 MYH7P12883 1935 aa29.45■■■□□ 2.3
TGFBR1-207ENST00000549766 WTIPA6NIX2 430 aaPredicted RBP29.44■■■□□ 2.3
TGFBR1-207ENST00000549766 M0R2C6 588 aa29.44■■■□□ 2.3
TGFBR1-207ENST00000549766 ADCK5Q3MIX3 580 aa29.44■■■□□ 2.3
TGFBR1-207ENST00000549766 ZSWIM6Q9HCJ5 1215 aa29.44■■■□□ 2.3
TGFBR1-207ENST00000549766 NRXN2Q9P2S2 1712 aa29.44■■■□□ 2.3
TGFBR1-207ENST00000549766 RPAP1Q9BWH6 1393 aaPredicted RBP29.44■■■□□ 2.3
TGFBR1-207ENST00000549766 UBE3CQ15386 1083 aa29.43■■■□□ 2.3
TGFBR1-207ENST00000549766 DOCK2Q92608 1830 aa29.42■■■□□ 2.3
TGFBR1-207ENST00000549766 CHMP5Q9NZZ3 219 aa29.42■■■□□ 2.3
TGFBR1-207ENST00000549766 ZBTB22O15209 634 aa29.41■■■□□ 2.3
TGFBR1-207ENST00000549766 HSPD1P10809 573 aaKnown RBP29.41■■■□□ 2.3
TGFBR1-207ENST00000549766 VPS53Q5VIR6 699 aa29.41■■■□□ 2.3
TGFBR1-207ENST00000549766 FAM84BQ96KN1 310 aaPredicted RBP29.41■■■□□ 2.3
TGFBR1-207ENST00000549766 HOXA10P31260 410 aaPredicted RBP29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 GYG1P46976 350 aa29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 SLC9C2Q5TAH2 1124 aa29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 FBXO33Q7Z6M2 555 aa29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 RPGRQ92834 1020 aaKnown RBP29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 JAKMIP1Q96N16 626 aaKnown RBP29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 PUS7LQ9H0K6 701 aaKnown RBP29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 TCRBV5S4A2TA0A5A2 114 aa29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 CASTP20810 708 aaKnown RBP29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 EZH2Q15910 746 aaKnown RBP29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 WASHC4Q2M389 1173 aa29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 CAVIN4Q5BKX8 364 aa29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 TMX3Q96JJ7 454 aa29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 CIZ1Q9ULV3 898 aaPredicted RBP29.4■■■□□ 2.3
TGFBR1-207ENST00000549766 IRS2Q9Y4H2 1338 aa29.39■■■□□ 2.3
TGFBR1-207ENST00000549766 IDH1O75874 414 aaKnown RBP29.39■■■□□ 2.3
TGFBR1-207ENST00000549766 HSP90AA1P07900 732 aaKnown RBP29.39■■■□□ 2.3
TGFBR1-207ENST00000549766 GNL3LQ9NVN8 582 aaKnown RBP29.39■■■□□ 2.3
TGFBR1-207ENST00000549766 RBM17Q96I25 401 aaKnown RBP29.38■■■□□ 2.29
TGFBR1-207ENST00000549766 TAF6LQ9Y6J9 622 aa29.38■■■□□ 2.29
TGFBR1-207ENST00000549766 MYO5AQ9Y4I1 1855 aaKnown RBP29.38■■■□□ 2.29
TGFBR1-207ENST00000549766 FOXP2O15409 715 aa29.37■■■□□ 2.29
TGFBR1-207ENST00000549766 PDE6AP16499 860 aa29.37■■■□□ 2.29
TGFBR1-207ENST00000549766 PSMA5P28066 241 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms